Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892700

Identifier: 51892700

GI number: 51892700

Start: 1698600

End: 1699622

Strand: Reverse

Name: 51892700

Synonym: STH1562

Alternate gene names: NA

Gene position: 1699622-1698600 (Counterclockwise)

Preceding gene: 51892701

Following gene: 51892691

Centisome position: 47.66

GC content: 65.4

Gene sequence:

>1023_bases
GTGTTTTCCCCCGGCATCAGCGTGCCGGATGCGCTGATTCGCACCCGGCATCTGTCCGAAGGGGCGAAGATGTTCTGGTG
CTACCTGCGCACGGTCAGGAAGGAGCCGGTATCGTTCAAGCAGCTGCGCGCCAGGACCGGTCTCGCCCAGAACTCCATTC
TGAAGTACCTACGGGAGTTAAGTCGGACCGGTTGGCTGGAATATCGGCGCGGCCGATACTCCCTTACCTGCCACGCGATC
TGGAAGGACGGGCGGCCGGCATTTCGGCTGCCGGTGGACCTGATCTGTGACCGCGGGCTGCCGGCCGCTGCCAAACTGGT
CTGGGGTGCGATCACCCAGCTGAAGGACGGCTTCTCGTATGCCGAGCTGGTTCGCTGCACCCGCTACTCCCGGAACACGG
TGGCAAAATACGTCAGGCTGCTGCTTCAGAAGGGCTGGCTCCGGGGCAAGGCCCACCGAGAGGCCCGCAGGAAGCGCTTC
CTCGTGCAGCCGGCCAACCCGCACCATGAGCGCCGACAGGCGGACCTGAACCTGTTCCAGAGGGCGAAGAAGCTGGCCGA
GAAGCGCATCGGCGACTCCATCGGCCAGCTGTACGCGACATACATGGTCTCCCTGATCGTCAGGGAGGACATCATCATCT
GCAACGCCCAACCGTGGGGCCTGGTCAACCCCAGGACCGGCGCCCGCCTGCAGTACGACATCCTCCTGCCCAGGAGCCGC
GTGGCCATCGAGTTCCAGGGCCCGCAACACGACGGGCCCACGGCCCTGTACCCGGATGAGGCGCAGTTCCGGGCCCAGCA
GGAAAGGGATCATCTGAAACGGCAGCGGAGCGCCGAACTGGGCATCCGCCTGATCGAGGTAAGGGCGCAGGACCTCACCT
TCCCGCGGCTGGCCCAACTGCTGCAGGAAGCCGGTGTGCCCGTAACCTCCCAACCGTGTGCGGCCCCGCACCTCTACGAG
CTACTCGAGAAGGAGACCGCCGCGTACCGCAAGGCGGTCTCCGAAGTCACGAGAGCCGGATAG

Upstream 100 bases:

>100_bases
CCTCAGGTCACGTAATGGCAGGAGTCAATCTGCTATTTTCTTCCGGGCAAGGAGGATATTGCTGTTCGGTCGGCGAATGG
ATGTTCTGAGGTGAGCGAGC

Downstream 100 bases:

>100_bases
AGAGGAGTCAACGCTGCCTGTCCGGCCGGGCCGATCCGGCCCACCCCATCCGTCCACGGCGGGCGTGCGCCAGCCGGGGC
AGAACCGGCTACTCCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MFSPGISVPDALIRTRHLSEGAKMFWCYLRTVRKEPVSFKQLRARTGLAQNSILKYLRELSRTGWLEYRRGRYSLTCHAI
WKDGRPAFRLPVDLICDRGLPAAAKLVWGAITQLKDGFSYAELVRCTRYSRNTVAKYVRLLLQKGWLRGKAHREARRKRF
LVQPANPHHERRQADLNLFQRAKKLAEKRIGDSIGQLYATYMVSLIVREDIIICNAQPWGLVNPRTGARLQYDILLPRSR
VAIEFQGPQHDGPTALYPDEAQFRAQQERDHLKRQRSAELGIRLIEVRAQDLTFPRLAQLLQEAGVPVTSQPCAAPHLYE
LLEKETAAYRKAVSEVTRAG

Sequences:

>Translated_340_residues
MFSPGISVPDALIRTRHLSEGAKMFWCYLRTVRKEPVSFKQLRARTGLAQNSILKYLRELSRTGWLEYRRGRYSLTCHAI
WKDGRPAFRLPVDLICDRGLPAAAKLVWGAITQLKDGFSYAELVRCTRYSRNTVAKYVRLLLQKGWLRGKAHREARRKRF
LVQPANPHHERRQADLNLFQRAKKLAEKRIGDSIGQLYATYMVSLIVREDIIICNAQPWGLVNPRTGARLQYDILLPRSR
VAIEFQGPQHDGPTALYPDEAQFRAQQERDHLKRQRSAELGIRLIEVRAQDLTFPRLAQLLQEAGVPVTSQPCAAPHLYE
LLEKETAAYRKAVSEVTRAG
>Mature_340_residues
MFSPGISVPDALIRTRHLSEGAKMFWCYLRTVRKEPVSFKQLRARTGLAQNSILKYLRELSRTGWLEYRRGRYSLTCHAI
WKDGRPAFRLPVDLICDRGLPAAAKLVWGAITQLKDGFSYAELVRCTRYSRNTVAKYVRLLLQKGWLRGKAHREARRKRF
LVQPANPHHERRQADLNLFQRAKKLAEKRIGDSIGQLYATYMVSLIVREDIIICNAQPWGLVNPRTGARLQYDILLPRSR
VAIEFQGPQHDGPTALYPDEAQFRAQQERDHLKRQRSAELGIRLIEVRAQDLTFPRLAQLLQEAGVPVTSQPCAAPHLYE
LLEKETAAYRKAVSEVTRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39052; Mature: 39052

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSPGISVPDALIRTRHLSEGAKMFWCYLRTVRKEPVSFKQLRARTGLAQNSILKYLREL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
SRTGWLEYRRGRYSLTCHAIWKDGRPAFRLPVDLICDRGLPAAAKLVWGAITQLKDGFSY
HHCCCHHHCCCCEEEEEEEEECCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCH
AELVRCTRYSRNTVAKYVRLLLQKGWLRGKAHREARRKRFLVQPANPHHERRQADLNLFQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCCCHHHHHHHHHHHHH
RAKKLAEKRIGDSIGQLYATYMVSLIVREDIIICNAQPWGLVNPRTGARLQYDILLPRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEECCCCE
VAIEFQGPQHDGPTALYPDEAQFRAQQERDHLKRQRSAELGIRLIEVRAQDLTFPRLAQL
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHCCHHHHHHH
LQEAGVPVTSQPCAAPHLYELLEKETAAYRKAVSEVTRAG
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSPGISVPDALIRTRHLSEGAKMFWCYLRTVRKEPVSFKQLRARTGLAQNSILKYLREL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHH
SRTGWLEYRRGRYSLTCHAIWKDGRPAFRLPVDLICDRGLPAAAKLVWGAITQLKDGFSY
HHCCCHHHCCCCEEEEEEEEECCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHCCCCH
AELVRCTRYSRNTVAKYVRLLLQKGWLRGKAHREARRKRFLVQPANPHHERRQADLNLFQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEECCCCCCHHHHHHHHHHHHH
RAKKLAEKRIGDSIGQLYATYMVSLIVREDIIICNAQPWGLVNPRTGARLQYDILLPRSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEECCCCE
VAIEFQGPQHDGPTALYPDEAQFRAQQERDHLKRQRSAELGIRLIEVRAQDLTFPRLAQL
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHCCHHHHHHH
LQEAGVPVTSQPCAAPHLYELLEKETAAYRKAVSEVTRAG
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA