Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is gpr [H]

Identifier: 51892571

GI number: 51892571

Start: 1578901

End: 1579872

Strand: Reverse

Name: gpr [H]

Synonym: STH1433

Alternate gene names: 51892571

Gene position: 1579872-1578901 (Counterclockwise)

Preceding gene: 51892574

Following gene: 51892567

Centisome position: 44.3

GC content: 68.62

Gene sequence:

>972_bases
GTGCAGGCACGGGATTATCTGAGCCCCTTCACGGACCTGGCCCTGGAGGCCACCGCCGCGGCCAGGGGGGACGCCCGGAC
CGAGCTGCCGGGAGTGGTGATGCGGGAGGAGCGGTACGACGTCGCCACCGTCTCCTGGGTCGAGGTGATGCCGGGCGTGG
GGGAGCAGACCATCGGCAAGCCCGCCGGCAACTACGTGACCATTGACGCGCCCCAGCTCCGCAGGCGAAACCGGGATCTG
CAGGAGCAGGTGGGCAAGATCCTGGTGGAGCAGTTGAACAAGCTGCTGCACCTGAAGGAGGACGACACCGTCCTCGTGGT
GGGGCTGGGCAACTGGAACGCGACGCCGGACGCACTGGGGCCGCGGGTCACCGGGAAGCTGATGGTGACCCGCCATCTGC
GGGAGTTCGTGCCCGCCGACGTGGCCGGGGGCCTTCGGGCGGTCGCGGCGATCGCCCCCGGGGTGCTGGGCACCACCGGC
ATCGAGACCGCCGAAGTCATCCTCGGCATCGTGGAACGCATCAAGCCCGCGGTGGTCATCTGCATCGACGCGCTGGCAGC
GCGGTCGGTGGAGCGCATCGGCACGACGATCCAGATCGCCGACACCGGCATCGCCCCGGGCGGGGGCATCGGCAACAAGC
GGCAGGCGCTCAACCGGGAGTCCCTGGGGGTCGACGTCATCGCCATCGGCGTTCCCACCGTCGTACACGCCACGACCATC
GTGCAGGACGCCTTCGAGGCCATGGCCCAGAGCTTCGCCGGCACCAAGCCCTTCTTCCAGCTGTTCAACTCCCGGGAGGA
GCGGCAGAAACTGCTCAGCGAGGTGCTCTCGCCGACGGTGGGCGAGCTGGTGGTCACGCCCAAGGAGATCGACGAGCTCA
CCGAGGACATGGCCAAGCTGATCGCCGGCAGCCTGAACGCGGTTCTGCACACCAGTGTCACCGCCCAGGATCTGCTGCGC
TACATCAACTGA

Upstream 100 bases:

>100_bases
CACACAGGCCAATCGATCCCTGCCGCGCAGGTATGCGCCGCCATTGCGCAGGAGAGAATAGGCGCAGGCGGTGTTACCCA
CCGAATCGGGAGGGAAAGAT

Downstream 100 bases:

>100_bases
GGAGGCAGAAGCGGTGCGCCGCTCCTGCCTCCCGTACCCGCTCAGAACTGACCGGTGGTGGTACCGCCCGCCAGCTGGGA
CTCGGCGATGGCGATCATCT

Product: germination protease

Products: NA

Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQARDYLSPFTDLALEATAAARGDARTELPGVVMREERYDVATVSWVEVMPGVGEQTIGKPAGNYVTIDAPQLRRRNRDL
QEQVGKILVEQLNKLLHLKEDDTVLVVGLGNWNATPDALGPRVTGKLMVTRHLREFVPADVAGGLRAVAAIAPGVLGTTG
IETAEVILGIVERIKPAVVICIDALAARSVERIGTTIQIADTGIAPGGGIGNKRQALNRESLGVDVIAIGVPTVVHATTI
VQDAFEAMAQSFAGTKPFFQLFNSREERQKLLSEVLSPTVGELVVTPKEIDELTEDMAKLIAGSLNAVLHTSVTAQDLLR
YIN

Sequences:

>Translated_323_residues
MQARDYLSPFTDLALEATAAARGDARTELPGVVMREERYDVATVSWVEVMPGVGEQTIGKPAGNYVTIDAPQLRRRNRDL
QEQVGKILVEQLNKLLHLKEDDTVLVVGLGNWNATPDALGPRVTGKLMVTRHLREFVPADVAGGLRAVAAIAPGVLGTTG
IETAEVILGIVERIKPAVVICIDALAARSVERIGTTIQIADTGIAPGGGIGNKRQALNRESLGVDVIAIGVPTVVHATTI
VQDAFEAMAQSFAGTKPFFQLFNSREERQKLLSEVLSPTVGELVVTPKEIDELTEDMAKLIAGSLNAVLHTSVTAQDLLR
YIN
>Mature_323_residues
MQARDYLSPFTDLALEATAAARGDARTELPGVVMREERYDVATVSWVEVMPGVGEQTIGKPAGNYVTIDAPQLRRRNRDL
QEQVGKILVEQLNKLLHLKEDDTVLVVGLGNWNATPDALGPRVTGKLMVTRHLREFVPADVAGGLRAVAAIAPGVLGTTG
IETAEVILGIVERIKPAVVICIDALAARSVERIGTTIQIADTGIAPGGGIGNKRQALNRESLGVDVIAIGVPTVVHATTI
VQDAFEAMAQSFAGTKPFFQLFNSREERQKLLSEVLSPTVGELVVTPKEIDELTEDMAKLIAGSLNAVLHTSVTAQDLLR
YIN

Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005080
- InterPro:   IPR000671
- ProDom:   PD041835 [H]

Pfam domain/function: PF03418 Peptidase_A25 [H]

EC number: =3.4.24.78 [H]

Molecular weight: Translated: 34626; Mature: 34626

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARDYLSPFTDLALEATAAARGDARTELPGVVMREERYDVATVSWVEVMPGVGEQTIGK
CCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHCCC
PAGNYVTIDAPQLRRRNRDLQEQVGKILVEQLNKLLHLKEDDTVLVVGLGNWNATPDALG
CCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCC
PRVTGKLMVTRHLREFVPADVAGGLRAVAAIAPGVLGTTGIETAEVILGIVERIKPAVVI
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
CIDALAARSVERIGTTIQIADTGIAPGGGIGNKRQALNRESLGVDVIAIGVPTVVHATTI
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHCHHHCCCEEEEECCCHHHHHHHH
VQDAFEAMAQSFAGTKPFFQLFNSREERQKLLSEVLSPTVGELVVTPKEIDELTEDMAKL
HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHEEECHHHHHHHHHHHHHH
IAGSLNAVLHTSVTAQDLLRYIN
HHHHHHHHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MQARDYLSPFTDLALEATAAARGDARTELPGVVMREERYDVATVSWVEVMPGVGEQTIGK
CCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCHHCCC
PAGNYVTIDAPQLRRRNRDLQEQVGKILVEQLNKLLHLKEDDTVLVVGLGNWNATPDALG
CCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCC
PRVTGKLMVTRHLREFVPADVAGGLRAVAAIAPGVLGTTGIETAEVILGIVERIKPAVVI
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHH
CIDALAARSVERIGTTIQIADTGIAPGGGIGNKRQALNRESLGVDVIAIGVPTVVHATTI
HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHCHHHCCCEEEEECCCHHHHHHHH
VQDAFEAMAQSFAGTKPFFQLFNSREERQKLLSEVLSPTVGELVVTPKEIDELTEDMAKL
HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHEEECHHHHHHHHHHHHHH
IAGSLNAVLHTSVTAQDLLRYIN
HHHHHHHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]