| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892505
Identifier: 51892505
GI number: 51892505
Start: 1515050
End: 1516087
Strand: Reverse
Name: 51892505
Synonym: STH1367
Alternate gene names: NA
Gene position: 1516087-1515050 (Counterclockwise)
Preceding gene: 51892513
Following gene: 51892504
Centisome position: 42.51
GC content: 70.33
Gene sequence:
>1038_bases GTGCGGGTCGTCATCCCCGTGTTGCACCTCCACCGCGGCGGCGGCTGCCGGGTCATCGCCGAGGCAGCCAACCAGCTGGT CGAGCGGGGTCACGACGTCACCGTGGTCGTGCTCGAGGGCCTCCCCCTTGCCTATCCGCTCAAATCCCGGGTCAAACGGG TCAGCAAGATCACGCCGTCGGTGATCCCGGAGGCCGACGTGATCTTGCCCAACTTCTGGCCGACGGTCAGGCCCGCCGCC GAAAGCGGCAAGGGCCGGGTCGTCCGGTTCAGCACCGGGTTCGAGCCCATGTGGGTGCCCGAGAACAAAGCGGCCCTGGA CACGTACCTCCAGGGCTTTCCGGTGATCACACTGGGGCCGCATCTGCGCAGGATCATCCGGGAGGCGACCGGACAGGACT GCTTCATCGCCCAGCCCGGCGTGGACGGCCGCGTCTTCCGTCCGCTGGACGGCGCGCCGAGAGACGGTCGGACGGTGTTC TTCATCTACCGGTCGGAGGCGCACGGCTACCACTATAAGGGCAACGGCGACTTCGCGGCGGCCATGGAGCTCGTCCGCCG CCAGATGCCGGACGTGCGGGTGCTGGTGGCTGCCACGGAAGGCGACTCCCCCGGAACCCCGCCTCCCCCCTTCGCCTTCC CTTTCACCGAAATCCGGCCCGAGGACGACCGGGCGATGGCCGAGGCCTACAACCGTGCGGCCGTCTACGTGCTGGCCTCC TGGTTTGAAGCGCTCTCGCTGCCCCCGCTGGAGGCCATGGCCTGCGGCACGCCGGTGGTGCTCACCGACTGCGGCGGCGT GCGCGACTACGCCCGCCCGGGCGAGAACTGCCTGCTCAGCCCGCCGAAGCAGCCCGACCGCCTGGCCGGGTACATCCTGA GCGTGCTCAGGGAGCCTGACCTGCGGTCCCGGCTGGCGGAGGGCGGCCTGCGCACCGCGGCGGTGTGGACGTGGAAGCGC TTCGGCGACCAGCTGGAGGACGCCCTCCGGCAGATCATGCAGGGGCATGTCCAGCCGCAGGAGGCAAGGGACCCGTGA
Upstream 100 bases:
>100_bases GCAGCTTCCGACAACCGCCGAAGGGGCGCCGCAGCCGCGCGCCAAACGCCCGCGCGGCGCCGCGCAGGCGGAAGCAGTTC AGTGACTGGAGGGGTCCGCT
Downstream 100 bases:
>100_bases AGATCACCATTCCGGCGTTCAACCTGGAGCTGGGCGGGGGCACGCGCACCCTCGTCCGGGTGGCCGAAGGGCTGGCGGCC TACGGCCACGACGTCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Group 1 Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase; Glycosyltransferase Family 4 Domain Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRVVIPVLHLHRGGGCRVIAEAANQLVERGHDVTVVVLEGLPLAYPLKSRVKRVSKITPSVIPEADVILPNFWPTVRPAA ESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVITLGPHLRRIIREATGQDCFIAQPGVDGRVFRPLDGAPRDGRTVF FIYRSEAHGYHYKGNGDFAAAMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIRPEDDRAMAEAYNRAAVYVLAS WFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGYILSVLREPDLRSRLAEGGLRTAAVWTWKR FGDQLEDALRQIMQGHVQPQEARDP
Sequences:
>Translated_345_residues MRVVIPVLHLHRGGGCRVIAEAANQLVERGHDVTVVVLEGLPLAYPLKSRVKRVSKITPSVIPEADVILPNFWPTVRPAA ESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVITLGPHLRRIIREATGQDCFIAQPGVDGRVFRPLDGAPRDGRTVF FIYRSEAHGYHYKGNGDFAAAMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIRPEDDRAMAEAYNRAAVYVLAS WFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGYILSVLREPDLRSRLAEGGLRTAAVWTWKR FGDQLEDALRQIMQGHVQPQEARDP >Mature_345_residues MRVVIPVLHLHRGGGCRVIAEAANQLVERGHDVTVVVLEGLPLAYPLKSRVKRVSKITPSVIPEADVILPNFWPTVRPAA ESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVITLGPHLRRIIREATGQDCFIAQPGVDGRVFRPLDGAPRDGRTVF FIYRSEAHGYHYKGNGDFAAAMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIRPEDDRAMAEAYNRAAVYVLAS WFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGYILSVLREPDLRSRLAEGGLRTAAVWTWKR FGDQLEDALRQIMQGHVQPQEARDP
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38090; Mature: 38090
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVIPVLHLHRGGGCRVIAEAANQLVERGHDVTVVVLEGLPLAYPLKSRVKRVSKITPS CEEEEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC VIPEADVILPNFWPTVRPAAESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVITLGP CCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCCCEEEECH HLRRIIREATGQDCFIAQPGVDGRVFRPLDGAPRDGRTVFFIYRSEAHGYHYKGNGDFAA HHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCCHHH AMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIRPEDDRAMAEAYNRAAVYVLAS HHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGYILSVLREPD HHHHHCCCCHHHHHCCCCEEEECCCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCC LRSRLAEGGLRTAAVWTWKRFGDQLEDALRQIMQGHVQPQEARDP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRVVIPVLHLHRGGGCRVIAEAANQLVERGHDVTVVVLEGLPLAYPLKSRVKRVSKITPS CEEEEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC VIPEADVILPNFWPTVRPAAESGKGRVVRFSTGFEPMWVPENKAALDTYLQGFPVITLGP CCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCHHHHHHHHCCCCEEEECH HLRRIIREATGQDCFIAQPGVDGRVFRPLDGAPRDGRTVFFIYRSEAHGYHYKGNGDFAA HHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEECCCCCHHH AMELVRRQMPDVRVLVAATEGDSPGTPPPPFAFPFTEIRPEDDRAMAEAYNRAAVYVLAS HHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WFEALSLPPLEAMACGTPVVLTDCGGVRDYARPGENCLLSPPKQPDRLAGYILSVLREPD HHHHHCCCCHHHHHCCCCEEEECCCCCHHHCCCCCCCEECCCCCHHHHHHHHHHHHCCCC LRSRLAEGGLRTAAVWTWKRFGDQLEDALRQIMQGHVQPQEARDP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA