| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892504
Identifier: 51892504
GI number: 51892504
Start: 1514052
End: 1515053
Strand: Reverse
Name: 51892504
Synonym: STH1366
Alternate gene names: NA
Gene position: 1515053-1514052 (Counterclockwise)
Preceding gene: 51892505
Following gene: 51892497
Centisome position: 42.48
GC content: 70.36
Gene sequence:
>1002_bases GTGAAGATCACCATTCCGGCGTTCAACCTGGAGCTGGGCGGGGGCACGCGCACCCTCGTCCGGGTGGCCGAAGGGCTGGC GGCCTACGGCCACGACGTCGCGTTCCTGATCCCGGAGCGGGGGGGCATCCAGTGGAAGGTCACCGTTCCGGTGATCTCGG TTCCCTGGATCGTCCCCGATGCGTTCCCCAAGTCCGACATCATCCTGACCAACTTCTGGAGCACCGTGCCGCCGGCCTGG GAGAGCGGCGCGGGGCAGGTGGTCCGGTTCAGCCTGGGCTACGAGCCGCTGTGGGTGAAGGACCCCCGGGCGAAGGAGAC CTACCTGCTCCCCATCCCCACCCTGGCCATCTCCCAGTGGCTGGCCAGCCGCATCGAAGCCGTGGCCGGCCGGCGACCGC AGGTCATCCACCTCGGCATCGAGCAGGAGACCTTCGTGCCGCCGCCTCCCGACGCCCCGCCCCGGTCGGGCATCCTGTAT ATCTGGCGGGACAAGACCCTGGGGTACGGCTTCAAGGGCACCGACGACTTCGTCCAGGCCCTGGGCCCGGTCATGCAGCG CTACCCCCGCCTTCCCCTCACCATCGTCACGCCCGTGGCCTGCCGCGTCCATCTGCCGTACCCGCACCGGGTGGTGGTCG CGCCCACGGACGCGGAGCTGGCCGAGCTCTATCAGCAGGCGGCGGTCTTCGTCTCCACCTCCTGGTTCGAGGGCTTCTCC ATGCCGCCGTTGGAGGCCATGAGCTGCGGCGCGGCCGTGGTCGCGACCAACTGCGGGGGCATTGGCGAGTACGCCCGGCA CCAGGTCAACTGCCTGCTGGTACCCCCCCGGACCCCGATGGCCCTTGCGCAGGCGATCCTCACTGTCCTGGGCGATCCGG CCCTCCGGCAGCGGCTGGGCGCCGCCGGCGTCGCCACCGCCCGCGACTGGAGCTGGCAGCGCACCTGGAAGGAGATGCAC GAAGCGCTCACGGCCATTCACGAGGCGAGCAGAGGGACCTGA
Upstream 100 bases:
>100_bases CCGCGGCGGTGTGGACGTGGAAGCGCTTCGGCGACCAGCTGGAGGACGCCCTCCGGCAGATCATGCAGGGGCATGTCCAG CCGCAGGAGGCAAGGGACCC
Downstream 100 bases:
>100_bases CCGGACACGGCCGAAAAAGCAGGCCATCGAGGCGACAGAGCGCAACGCCCGGCCTCGATGGCTGCGCGTTCAACGAGTTG CCGCCTCGGCGGGGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Protein; Glycosyltransferase-Like Protein; Phosphatidylinositol Alpha-Mannosyltransferase; Group 1 Glycosyl Transferase Protein; Glycosyltransferase Mannosyltransferase; Glycogen Synthase; Mannosyltransferase B; Mannosyltransferase PimB; Glycosyltransferase Family 4 Domain Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKITIPAFNLELGGGTRTLVRVAEGLAAYGHDVAFLIPERGGIQWKVTVPVISVPWIVPDAFPKSDIILTNFWSTVPPAW ESGAGQVVRFSLGYEPLWVKDPRAKETYLLPIPTLAISQWLASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRSGILY IWRDKTLGYGFKGTDDFVQALGPVMQRYPRLPLTIVTPVACRVHLPYPHRVVVAPTDAELAELYQQAAVFVSTSWFEGFS MPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAILTVLGDPALRQRLGAAGVATARDWSWQRTWKEMH EALTAIHEASRGT
Sequences:
>Translated_333_residues MKITIPAFNLELGGGTRTLVRVAEGLAAYGHDVAFLIPERGGIQWKVTVPVISVPWIVPDAFPKSDIILTNFWSTVPPAW ESGAGQVVRFSLGYEPLWVKDPRAKETYLLPIPTLAISQWLASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRSGILY IWRDKTLGYGFKGTDDFVQALGPVMQRYPRLPLTIVTPVACRVHLPYPHRVVVAPTDAELAELYQQAAVFVSTSWFEGFS MPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAILTVLGDPALRQRLGAAGVATARDWSWQRTWKEMH EALTAIHEASRGT >Mature_333_residues MKITIPAFNLELGGGTRTLVRVAEGLAAYGHDVAFLIPERGGIQWKVTVPVISVPWIVPDAFPKSDIILTNFWSTVPPAW ESGAGQVVRFSLGYEPLWVKDPRAKETYLLPIPTLAISQWLASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRSGILY IWRDKTLGYGFKGTDDFVQALGPVMQRYPRLPLTIVTPVACRVHLPYPHRVVVAPTDAELAELYQQAAVFVSTSWFEGFS MPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAILTVLGDPALRQRLGAAGVATARDWSWQRTWKEMH EALTAIHEASRGT
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36485; Mature: 36485
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITIPAFNLELGGGTRTLVRVAEGLAAYGHDVAFLIPERGGIQWKVTVPVISVPWIVPD CEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEECEECCC AFPKSDIILTNFWSTVPPAWESGAGQVVRFSLGYEPLWVKDPRAKETYLLPIPTLAISQW CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCHHHHHHH LASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRSGILYIWRDKTLGYGFKGTDDFVQA HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH LGPVMQRYPRLPLTIVTPVACRVHLPYPHRVVVAPTDAELAELYQQAAVFVSTSWFEGFS HHHHHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCC MPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAILTVLGDPALRQRLG CCCHHHHHCCCEEEEECCCCCCHHHHCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHC AAGVATARDWSWQRTWKEMHEALTAIHEASRGT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKITIPAFNLELGGGTRTLVRVAEGLAAYGHDVAFLIPERGGIQWKVTVPVISVPWIVPD CEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEEEEEECEECCC AFPKSDIILTNFWSTVPPAWESGAGQVVRFSLGYEPLWVKDPRAKETYLLPIPTLAISQW CCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCHHHHHHH LASRIEAVAGRRPQVIHLGIEQETFVPPPPDAPPRSGILYIWRDKTLGYGFKGTDDFVQA HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH LGPVMQRYPRLPLTIVTPVACRVHLPYPHRVVVAPTDAELAELYQQAAVFVSTSWFEGFS HHHHHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCC MPPLEAMSCGAAVVATNCGGIGEYARHQVNCLLVPPRTPMALAQAILTVLGDPALRQRLG CCCHHHHHCCCEEEEECCCCCCHHHHCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHC AAGVATARDWSWQRTWKEMHEALTAIHEASRGT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA