| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892461
Identifier: 51892461
GI number: 51892461
Start: 1468180
End: 1468497
Strand: Reverse
Name: 51892461
Synonym: STH1323
Alternate gene names: NA
Gene position: 1468497-1468180 (Counterclockwise)
Preceding gene: 51892462
Following gene: 51892460
Centisome position: 41.18
GC content: 66.35
Gene sequence:
>318_bases GTGCAGAACAGGAGGGCGCACATGTACGAGTTTCAGGGCCGCGACTGGACTGAGCTGGCCAGAGCGTGGGGCATCTCGCT GGAACACGAGGACGACGAACTCGCCGCCCGGGTCCGCCACTACATGCGCACACACGTCTCGGCTGACGCCACGCCGGACC CCGCCATGGTCGCAGACCTCAGGCGGTTCGTGGCCGGTTTCTGCGAAAACGCCAAGGAACGGCCCGATGCGCCGCTGTGG CAGGGCCTGCGGGACATCCAGCACGACCTGACCTTCGTGCAGTTCTGCGACGTGCTGCTGCGCCACATGTGGTGCTGA
Upstream 100 bases:
>100_bases ATCTATGGAGGGGCCCAGGCCCCCGCACCCCGACCGTGTGGCCGAGGGCTGACACGGTCCGGGCGACCTCGCTTTCGGAA GGCGCCGGTGTAACCGCGCA
Downstream 100 bases:
>100_bases GGCCGGGGTGAAGGTCGCTGATCCGCCGGTGACGGGGTGACCGGCGCATCAGTGACCTTCATCGCGCGCTGGGGCCTTCC GTCCCCCGCGCTCTGCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MQNRRAHMYEFQGRDWTELARAWGISLEHEDDELAARVRHYMRTHVSADATPDPAMVADLRRFVAGFCENAKERPDAPLW QGLRDIQHDLTFVQFCDVLLRHMWC
Sequences:
>Translated_105_residues MQNRRAHMYEFQGRDWTELARAWGISLEHEDDELAARVRHYMRTHVSADATPDPAMVADLRRFVAGFCENAKERPDAPLW QGLRDIQHDLTFVQFCDVLLRHMWC >Mature_105_residues MQNRRAHMYEFQGRDWTELARAWGISLEHEDDELAARVRHYMRTHVSADATPDPAMVADLRRFVAGFCENAKERPDAPLW QGLRDIQHDLTFVQFCDVLLRHMWC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12427; Mature: 12427
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRRAHMYEFQGRDWTELARAWGISLEHEDDELAARVRHYMRTHVSADATPDPAMVADL CCCCCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RRFVAGFCENAKERPDAPLWQGLRDIQHDLTFVQFCDVLLRHMWC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNRRAHMYEFQGRDWTELARAWGISLEHEDDELAARVRHYMRTHVSADATPDPAMVADL CCCCCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RRFVAGFCENAKERPDAPLWQGLRDIQHDLTFVQFCDVLLRHMWC HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA