| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892443
Identifier: 51892443
GI number: 51892443
Start: 1441865
End: 1443682
Strand: Reverse
Name: 51892443
Synonym: STH1305
Alternate gene names: NA
Gene position: 1443682-1441865 (Counterclockwise)
Preceding gene: 51892444
Following gene: 51892442
Centisome position: 40.48
GC content: 66.12
Gene sequence:
>1818_bases ATGGACGACCGACGCAAGGTGGGCGAGATGCGCCCCAGCCAGCTCATCACGACCTTCGGACCCGGCGCCATCGTCGACCT TCCCGACCTGTCCGTCCTGGTGGCCGGCCTCAACCACTGGGACGAGGATCTGTGCCAGCCCATTCCGGAGAGCCGGCTGA CGGCGCGGCTTATGATCGACCGGGTCCTCGCGCCGCCCATGAACCCGCGGAACCCCAAGGAGCCCAACCTGCCCGTCTTC CGTTTCCCGACGTTCATGGTCTGCCCCGACTGCCGCACGCTGGCCCGCTACGACCGGTTCGTCGCAGACCGCAACGGCGT GCTGTACTGCTATCACAAGGGTACGGAAAAGGAGACCGACAAGGTCAGTGAGGCCTCCCGCGTCTTCCCAGTGCGCTTCA TGATCGCCTGCCCCAGTGGCCACCTGAGTGACTTCCCCTGGCACGCCTTCGTGCACCGGGACAAGCCGTGTCCACTGGGC GACAAGGGCCGGCTCACCCTGGACGAGAGCGGCACCAGCGGATCGATCCGGGACGTGGTGGTACGCTGCTCGTGCCGCCC GGAGAAGGGACGCTCGCTGGGAGACGCCTTCGGCAAGGACGCTGGAAAGGTCCTGGGGCGGTGCCCAGGCCGGAGGCCGT GGCTGGGCCGGGACGCAACAGAACTATGCGACGAGACGCCGCGGGCCCTGCTGCGCGGTGCGTCCAACGCGTACTTCCCC ATCGTGGAGAGTGCGCTGGCCATTCCTCCTTACACCCGACCCGAGTTCGACTACCTCGACAAGGTGCGCGACCAGCTGGA GGAGGCCTCCTCGTTCGAGGAGTTCCGGGATCAGGCGTGGCGCTGGGTGAACAGGGAGGTCCGAGAGCTCTTCACGCCTG AGCAAATCTGGACTGCCTGGGAGGAGAGGCGCAAGCTGAGACGAGGACCGGACCAGGACCTGCTCTTTCCCGAGTACCGG GCCCTGCTCTCCACCCCCTACTCCGACCCTGAGCAGGACTTCGAGGTGGAAGATCAGCCGGTGCCGCCCCTTTTCGAGGG GTTAATCGACCGGCTGGTGCAGGTTCGGCGGCTTAGAGAGGTGCGGGTCCTAGCGGGCTTCACCCGCATCGACCCACCCA GCGATATCACTGCCATCGTCACCGGTGACGAGGAGACCCGGTCAACCGCCCGCAGGGCGTTCCTGGGACCGCTGCAGCCC GAGGGTAAGCGGTGGCTGCCAGGGATCATGGTGCGGGGAGAGGGCATCTTCTTCACCCTGAACCTCGACGCCGTGCGTGC TTGGGAGGAACGCGTCAAGGACGCAGCGGATGCCATGGCGCAGGCGCACAAGAAGTACTGCACTGACCGAAACATATACC CGCACCCGCCTTTCCCAGGCGCCCGCTACGTCCTCCTGCACTCGCTGGCCCATGCCCTCATCCGGCAGCTAGGCATCAGA TCGGGCTACTCGACCACAGCCCTGCGCGAGCGGATTTACGCCCGGAACACGCCAGATGAGCAAATGGCGGGCGTGTTGAT CTATACCGCGACTCCGGACTCGGAGGGGAGCCTCGGAGGTCTCGTGGAGCAGGGGCAGACCGACCGGTTCGGCGAGGCGC TCTGGCACGCCTTGCAGGAGGCCTCGTACTGCTCCAGTGACCCGCTGTGCGCCGAGCACGAGCCCGAGGCGCACGGGGAC CTCAACGGTGCTGCGTGCCACGCCTGTCAGCTACTGGCAGAGACTTGTTGCGAACGCTCCAACCGCTTCCTTGACCGATC GTTCCTGGTGCCCACCGTGTCGAATCCGCACCTTGCGTTCTTCGGAGGCGTGTTGTGA
Upstream 100 bases:
>100_bases AGGAGAAGCGCTCCACCCGGGACCTGTTCGCGGCGCCCAACTCGATGCGGGACGTGGAGACCCCGCTGGGACTCTATCTG AAAGGGGAGGGCAGAGGCTG
Downstream 100 bases:
>100_bases TGAACCCGAAGCTGGAGCTCAGCCTAGTCGCCCTGGCCGAGAGTGCTGGGGATGACGCCCTGGCAGCGTTGCGGGCCCTG CTGGCGGCGGAGCGCATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MDDRRKVGEMRPSQLITTFGPGAIVDLPDLSVLVAGLNHWDEDLCQPIPESRLTARLMIDRVLAPPMNPRNPKEPNLPVF RFPTFMVCPDCRTLARYDRFVADRNGVLYCYHKGTEKETDKVSEASRVFPVRFMIACPSGHLSDFPWHAFVHRDKPCPLG DKGRLTLDESGTSGSIRDVVVRCSCRPEKGRSLGDAFGKDAGKVLGRCPGRRPWLGRDATELCDETPRALLRGASNAYFP IVESALAIPPYTRPEFDYLDKVRDQLEEASSFEEFRDQAWRWVNREVRELFTPEQIWTAWEERRKLRRGPDQDLLFPEYR ALLSTPYSDPEQDFEVEDQPVPPLFEGLIDRLVQVRRLREVRVLAGFTRIDPPSDITAIVTGDEETRSTARRAFLGPLQP EGKRWLPGIMVRGEGIFFTLNLDAVRAWEERVKDAADAMAQAHKKYCTDRNIYPHPPFPGARYVLLHSLAHALIRQLGIR SGYSTTALRERIYARNTPDEQMAGVLIYTATPDSEGSLGGLVEQGQTDRFGEALWHALQEASYCSSDPLCAEHEPEAHGD LNGAACHACQLLAETCCERSNRFLDRSFLVPTVSNPHLAFFGGVL
Sequences:
>Translated_605_residues MDDRRKVGEMRPSQLITTFGPGAIVDLPDLSVLVAGLNHWDEDLCQPIPESRLTARLMIDRVLAPPMNPRNPKEPNLPVF RFPTFMVCPDCRTLARYDRFVADRNGVLYCYHKGTEKETDKVSEASRVFPVRFMIACPSGHLSDFPWHAFVHRDKPCPLG DKGRLTLDESGTSGSIRDVVVRCSCRPEKGRSLGDAFGKDAGKVLGRCPGRRPWLGRDATELCDETPRALLRGASNAYFP IVESALAIPPYTRPEFDYLDKVRDQLEEASSFEEFRDQAWRWVNREVRELFTPEQIWTAWEERRKLRRGPDQDLLFPEYR ALLSTPYSDPEQDFEVEDQPVPPLFEGLIDRLVQVRRLREVRVLAGFTRIDPPSDITAIVTGDEETRSTARRAFLGPLQP EGKRWLPGIMVRGEGIFFTLNLDAVRAWEERVKDAADAMAQAHKKYCTDRNIYPHPPFPGARYVLLHSLAHALIRQLGIR SGYSTTALRERIYARNTPDEQMAGVLIYTATPDSEGSLGGLVEQGQTDRFGEALWHALQEASYCSSDPLCAEHEPEAHGD LNGAACHACQLLAETCCERSNRFLDRSFLVPTVSNPHLAFFGGVL >Mature_605_residues MDDRRKVGEMRPSQLITTFGPGAIVDLPDLSVLVAGLNHWDEDLCQPIPESRLTARLMIDRVLAPPMNPRNPKEPNLPVF RFPTFMVCPDCRTLARYDRFVADRNGVLYCYHKGTEKETDKVSEASRVFPVRFMIACPSGHLSDFPWHAFVHRDKPCPLG DKGRLTLDESGTSGSIRDVVVRCSCRPEKGRSLGDAFGKDAGKVLGRCPGRRPWLGRDATELCDETPRALLRGASNAYFP IVESALAIPPYTRPEFDYLDKVRDQLEEASSFEEFRDQAWRWVNREVRELFTPEQIWTAWEERRKLRRGPDQDLLFPEYR ALLSTPYSDPEQDFEVEDQPVPPLFEGLIDRLVQVRRLREVRVLAGFTRIDPPSDITAIVTGDEETRSTARRAFLGPLQP EGKRWLPGIMVRGEGIFFTLNLDAVRAWEERVKDAADAMAQAHKKYCTDRNIYPHPPFPGARYVLLHSLAHALIRQLGIR SGYSTTALRERIYARNTPDEQMAGVLIYTATPDSEGSLGGLVEQGQTDRFGEALWHALQEASYCSSDPLCAEHEPEAHGD LNGAACHACQLLAETCCERSNRFLDRSFLVPTVSNPHLAFFGGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68336; Mature: 68336
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDRRKVGEMRPSQLITTFGPGAIVDLPDLSVLVAGLNHWDEDLCQPIPESRLTARLMID CCCHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RVLAPPMNPRNPKEPNLPVFRFPTFMVCPDCRTLARYDRFVADRNGVLYCYHKGTEKETD HHHCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH KVSEASRVFPVRFMIACPSGHLSDFPWHAFVHRDKPCPLGDKGRLTLDESGTSGSIRDVV HHHHHHHCCEEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCCEEECCCCCCCCHHHHE VRCSCRPEKGRSLGDAFGKDAGKVLGRCPGRRPWLGRDATELCDETPRALLRGASNAYFP EEECCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH IVESALAIPPYTRPEFDYLDKVRDQLEEASSFEEFRDQAWRWVNREVRELFTPEQIWTAW HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EERRKLRRGPDQDLLFPEYRALLSTPYSDPEQDFEVEDQPVPPLFEGLIDRLVQVRRLRE HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VRVLAGFTRIDPPSDITAIVTGDEETRSTARRAFLGPLQPEGKRWLPGIMVRGEGIFFTL HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEE NLDAVRAWEERVKDAADAMAQAHKKYCTDRNIYPHPPFPGARYVLLHSLAHALIRQLGIR EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC SGYSTTALRERIYARNTPDEQMAGVLIYTATPDSEGSLGGLVEQGQTDRFGEALWHALQE CCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHH ASYCSSDPLCAEHEPEAHGDLNGAACHACQLLAETCCERSNRFLDRSFLVPTVSNPHLAF HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHH FGGVL CCCCC >Mature Secondary Structure MDDRRKVGEMRPSQLITTFGPGAIVDLPDLSVLVAGLNHWDEDLCQPIPESRLTARLMID CCCHHHHHCCCHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RVLAPPMNPRNPKEPNLPVFRFPTFMVCPDCRTLARYDRFVADRNGVLYCYHKGTEKETD HHHCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHH KVSEASRVFPVRFMIACPSGHLSDFPWHAFVHRDKPCPLGDKGRLTLDESGTSGSIRDVV HHHHHHHCCEEEEEEECCCCCCCCCCCHHHEECCCCCCCCCCCCEEECCCCCCCCHHHHE VRCSCRPEKGRSLGDAFGKDAGKVLGRCPGRRPWLGRDATELCDETPRALLRGASNAYFP EEECCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHH IVESALAIPPYTRPEFDYLDKVRDQLEEASSFEEFRDQAWRWVNREVRELFTPEQIWTAW HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EERRKLRRGPDQDLLFPEYRALLSTPYSDPEQDFEVEDQPVPPLFEGLIDRLVQVRRLRE HHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH VRVLAGFTRIDPPSDITAIVTGDEETRSTARRAFLGPLQPEGKRWLPGIMVRGEGIFFTL HHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEE NLDAVRAWEERVKDAADAMAQAHKKYCTDRNIYPHPPFPGARYVLLHSLAHALIRQLGIR EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC SGYSTTALRERIYARNTPDEQMAGVLIYTATPDSEGSLGGLVEQGQTDRFGEALWHALQE CCCCHHHHHHHHHHCCCCHHHHCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHH ASYCSSDPLCAEHEPEAHGDLNGAACHACQLLAETCCERSNRFLDRSFLVPTVSNPHLAF HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHH FGGVL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA