| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is prkA [H]
Identifier: 51892310
GI number: 51892310
Start: 1303118
End: 1305031
Strand: Reverse
Name: prkA [H]
Synonym: STH1172
Alternate gene names: 51892310
Gene position: 1305031-1303118 (Counterclockwise)
Preceding gene: 51892313
Following gene: 51892309
Centisome position: 36.6
GC content: 66.88
Gene sequence:
>1914_bases ATGAACACGCTGCTGCAGCAGCTGGAGGCATACCGGAACCGGGAGGAGTCCCTGCGCTGGGAGGGGACGTTCGCCGACTA CCTGGAGATCGTGGCCAGGAACCCGCGCGTGGCCCAGCATGCGCACGCCCGCATCTACAACATGATCGTCTCCCGCGGGG TGGAGGAAGTCAACGGCGTGCGGCGCTACCGCTTCTTCGAGCAGGAGCTCTTCGGCCTCGACCGCGCCCTGGAGCGGCTG GTGGAGGAGTACCTGCACCCCGCAGCCCGCCGCCTGGACGTGCGCAAGCGGATCCTCCTTCTCATGGGTCCGGTCAGCGG CGGGAAGTCCACCCTGGTCGCCCTGCTGAAGCGGGGGCTGGAGGAGTACAGCCGCACGCCGGAGGGAGCCGTCTACGCGA TCCGCGGTTGCCCGATGCACGAGGAACCGCTGCACCTGGTACCCCGCGAGCTGCGGCCGATGCTGGAGAAGGAGCTGGGC GTGGTCATCGAGGGCGACCTCTGCCCCCGCTGCCGGCTGATGGTGCGGGAGGAGTACGGCGGCCGGATCGAGGAGGTGCC CGTGGTGCGGGTGTTCCTCTCGGAGGCGGACCGTGTGGGCATCGGCACCTTCAGCCCCTCCGACCCCAAGTCGCAGGACA TCGCCGACCTCACGGGCTCCATCGACTTCTCCACCATCGGCGAGTACGGCTCCGAGTCTGACCCCCGCGCCTACCGTTTC GACGGCGAGCTGAACAAGGCCAACCGCGGCATCATGGAGTTTCAGGAGATGCTGAAGCTCGACGAGAAGTTCCTCTGGCA TCTGCTCAGCCTCAGCCAGGAGGGCAACTTCAAGGCCGGCCGCTTCGCCCTCATCTCCGCAGACGAGCTGGTGGTCGCCC ACACCAACGAGACCGAGTACCGGGCGTTCATCGCCAACAAGAAAAACGAGGCCCTGCAGAGCCGCATCATCGTCATCCCC ATCCCATACAACCTGCGGGTCTCCGACGAGGTGCGCATCTACGAGAAGCTGATCCGACAGGCCGACACGGGCCACGTCCA CATCGCCCCCCACGCGCTGTACACGGCCGCCGTCTTCTCCGTGCTGAGCCGCCTGAAGGAGTCGCAGCGGGCGGGCATGG ACCTGATGAAGAAGCTGAAGCTCTACGACGGCGCCCACGTGGAGGGGTACACGCCGGAGGACGTGGCCGAACTGCAGCGC GAATTCGAAGGCGTCGAGGGGATGAGCGGGGTGGACCCCCGCTACGTGATCAACCGCATCTCCTCCGCGATCATCCGCAA GGGCGAGAACAGCGACAAGGCGTGCATCAACGCGCTGGACATTCTGCGCTCCCTGAAGGACGGTCTGGACCAGCACCCCT CCATCACCCCGGAGGAGCGGGAACGGCTGCTCTCCCTCATCGCCCTGGCCCGGCAGGAGTACGACGACATCGCCCGGCGG GAGGTCCAGAAGGCCTTCATCCACGCCTACGAGGACTCCGCCCGCACCCTCCTCGCCAACTACCTGGACAACGTGGAGGC GTTCTGCGGCGGCCGGAAGATCCGGGACCCGCTGACCGACGAGCTGCGGGAGCCCGACGAGCGGCTGATGCGGTCGATCG AGGAGCAGATCGGCGTCTCGGAGAACGCGAAGAAGGCCTTTCGGGAGGAGATCATGATCCGGCTGTCCACCTACGCCCGC CGGGGGATGACCTTTGACTACACCTCCCACGAGCGGCTCCGGGAGGCCATCGAGAAGAAGCTCTTCGCGGACCTGAAGGA CGTCGTCAAGATCACCACGTCCCTGCACGCGCCCGACGCCGAACAGCAGCGGCGCATGGACGAGGTGGCAGAGCGGCTGG TGCAGGAGCACGGCTACTGCCCGTCCTGCGCCCACGAGCTGCTGCGCTACGTCGGCTCCCTGCTGAGCCGATAG
Upstream 100 bases:
>100_bases AACTAAAATGTTCACGTACTGGTCACATTCGCGGCATTCCGCGGTATGTTTCGACGATTGCGGCGCTGGGTATAACTCAT AGCCAGGAGGTGGAGTGCGG
Downstream 100 bases:
>100_bases CCACAGGGGCGACCCCGCGCACGCAACATGCCGCAGAGGAGGCGCGAGCGATGGCAGACCTGCCGTTTGTCATCTCCCGG GAGGACTGGTCCCTGCACCG
Product: serine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MNTLLQQLEAYRNREESLRWEGTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNGVRRYRFFEQELFGLDRALERL VEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGLEEYSRTPEGAVYAIRGCPMHEEPLHLVPRELRPMLEKELG VVIEGDLCPRCRLMVREEYGGRIEEVPVVRVFLSEADRVGIGTFSPSDPKSQDIADLTGSIDFSTIGEYGSESDPRAYRF DGELNKANRGIMEFQEMLKLDEKFLWHLLSLSQEGNFKAGRFALISADELVVAHTNETEYRAFIANKKNEALQSRIIVIP IPYNLRVSDEVRIYEKLIRQADTGHVHIAPHALYTAAVFSVLSRLKESQRAGMDLMKKLKLYDGAHVEGYTPEDVAELQR EFEGVEGMSGVDPRYVINRISSAIIRKGENSDKACINALDILRSLKDGLDQHPSITPEERERLLSLIALARQEYDDIARR EVQKAFIHAYEDSARTLLANYLDNVEAFCGGRKIRDPLTDELREPDERLMRSIEEQIGVSENAKKAFREEIMIRLSTYAR RGMTFDYTSHERLREAIEKKLFADLKDVVKITTSLHAPDAEQQRRMDEVAERLVQEHGYCPSCAHELLRYVGSLLSR
Sequences:
>Translated_637_residues MNTLLQQLEAYRNREESLRWEGTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNGVRRYRFFEQELFGLDRALERL VEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGLEEYSRTPEGAVYAIRGCPMHEEPLHLVPRELRPMLEKELG VVIEGDLCPRCRLMVREEYGGRIEEVPVVRVFLSEADRVGIGTFSPSDPKSQDIADLTGSIDFSTIGEYGSESDPRAYRF DGELNKANRGIMEFQEMLKLDEKFLWHLLSLSQEGNFKAGRFALISADELVVAHTNETEYRAFIANKKNEALQSRIIVIP IPYNLRVSDEVRIYEKLIRQADTGHVHIAPHALYTAAVFSVLSRLKESQRAGMDLMKKLKLYDGAHVEGYTPEDVAELQR EFEGVEGMSGVDPRYVINRISSAIIRKGENSDKACINALDILRSLKDGLDQHPSITPEERERLLSLIALARQEYDDIARR EVQKAFIHAYEDSARTLLANYLDNVEAFCGGRKIRDPLTDELREPDERLMRSIEEQIGVSENAKKAFREEIMIRLSTYAR RGMTFDYTSHERLREAIEKKLFADLKDVVKITTSLHAPDAEQQRRMDEVAERLVQEHGYCPSCAHELLRYVGSLLSR >Mature_637_residues MNTLLQQLEAYRNREESLRWEGTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNGVRRYRFFEQELFGLDRALERL VEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGLEEYSRTPEGAVYAIRGCPMHEEPLHLVPRELRPMLEKELG VVIEGDLCPRCRLMVREEYGGRIEEVPVVRVFLSEADRVGIGTFSPSDPKSQDIADLTGSIDFSTIGEYGSESDPRAYRF DGELNKANRGIMEFQEMLKLDEKFLWHLLSLSQEGNFKAGRFALISADELVVAHTNETEYRAFIANKKNEALQSRIIVIP IPYNLRVSDEVRIYEKLIRQADTGHVHIAPHALYTAAVFSVLSRLKESQRAGMDLMKKLKLYDGAHVEGYTPEDVAELQR EFEGVEGMSGVDPRYVINRISSAIIRKGENSDKACINALDILRSLKDGLDQHPSITPEERERLLSLIALARQEYDDIARR EVQKAFIHAYEDSARTLLANYLDNVEAFCGGRKIRDPLTDELREPDERLMRSIEEQIGVSENAKKAFREEIMIRLSTYAR RGMTFDYTSHERLREAIEKKLFADLKDVVKITTSLHAPDAEQQRRMDEVAERLVQEHGYCPSCAHELLRYVGSLLSR
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=579, Percent_Identity=31.433506044905, Blast_Score=262, Evalue=4e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 72965; Mature: 72965
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLQQLEAYRNREESLRWEGTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNGV CCHHHHHHHHHHCHHHCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHH RRYRFFEQELFGLDRALERLVEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EEYSRTPEGAVYAIRGCPMHEEPLHLVPRELRPMLEKELGVVIEGDLCPRCRLMVREEYG HHHHCCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHC GRIEEVPVVRVFLSEADRVGIGTFSPSDPKSQDIADLTGSIDFSTIGEYGSESDPRAYRF CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCEEEE DGELNKANRGIMEFQEMLKLDEKFLWHLLSLSQEGNFKAGRFALISADELVVAHTNETEY CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCHH RAFIANKKNEALQSRIIVIPIPYNLRVSDEVRIYEKLIRQADTGHVHIAPHALYTAAVFS HHHHHCCHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH VLSRLKESQRAGMDLMKKLKLYDGAHVEGYTPEDVAELQREFEGVEGMSGVDPRYVINRI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH SSAIIRKGENSDKACINALDILRSLKDGLDQHPSITPEERERLLSLIALARQEYDDIARR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVQKAFIHAYEDSARTLLANYLDNVEAFCGGRKIRDPLTDELREPDERLMRSIEEQIGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCC ENAKKAFREEIMIRLSTYARRGMTFDYTSHERLREAIEKKLFADLKDVVKITTSLHAPDA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EQQRRMDEVAERLVQEHGYCPSCAHELLRYVGSLLSR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTLLQQLEAYRNREESLRWEGTFADYLEIVARNPRVAQHAHARIYNMIVSRGVEEVNGV CCHHHHHHHHHHCHHHCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHH RRYRFFEQELFGLDRALERLVEEYLHPAARRLDVRKRILLLMGPVSGGKSTLVALLKRGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EEYSRTPEGAVYAIRGCPMHEEPLHLVPRELRPMLEKELGVVIEGDLCPRCRLMVREEYG HHHHCCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHC GRIEEVPVVRVFLSEADRVGIGTFSPSDPKSQDIADLTGSIDFSTIGEYGSESDPRAYRF CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCEEEE DGELNKANRGIMEFQEMLKLDEKFLWHLLSLSQEGNFKAGRFALISADELVVAHTNETEY CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCHH RAFIANKKNEALQSRIIVIPIPYNLRVSDEVRIYEKLIRQADTGHVHIAPHALYTAAVFS HHHHHCCHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH VLSRLKESQRAGMDLMKKLKLYDGAHVEGYTPEDVAELQREFEGVEGMSGVDPRYVINRI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH SSAIIRKGENSDKACINALDILRSLKDGLDQHPSITPEERERLLSLIALARQEYDDIARR HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EVQKAFIHAYEDSARTLLANYLDNVEAFCGGRKIRDPLTDELREPDERLMRSIEEQIGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCC ENAKKAFREEIMIRLSTYARRGMTFDYTSHERLREAIEKKLFADLKDVVKITTSLHAPDA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EQQRRMDEVAERLVQEHGYCPSCAHELLRYVGSLLSR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]