Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is yeaH [C]

Identifier: 51892309

GI number: 51892309

Start: 1301880

End: 1303067

Strand: Reverse

Name: yeaH [C]

Synonym: STH1171

Alternate gene names: 51892309

Gene position: 1303067-1301880 (Counterclockwise)

Preceding gene: 51892310

Following gene: 51892308

Centisome position: 36.54

GC content: 69.53

Gene sequence:

>1188_bases
ATGGCAGACCTGCCGTTTGTCATCTCCCGGGAGGACTGGTCCCTGCACCGCCAGGGGCAGATGGACCAGGAGCGGCACCA
GGCGCGGATCCGGGAGGCCATCCGGGCCAACCTGGCCGACATCGTGAGCGACGAGGCCATTATCGCCAGCGACGGCCGCA
AGGTGGTGCGGCTGCCGATCCGGGTCCTGAGGGAGTACCGGTTCCGGCTGGACTGGCAGAAGCAGCCCCGGGTGGGCGAG
GCGGACGGCCCCGTCCGCCCCGGTGAGCCCGTCGGCCGGCCCGGCCGGGCAGCCGAGGCGGCCGGCGGCAGCGGCGCCGG
CGACGAGGCCGGCGAAGACTGGTTCGAGACCGACGTGCCGCTGGAGGAGCTGGAGGAGCTGCTCTTCGCTGAGCTCTCCC
TCCCCCACCTCGAACCCAAACAGGAGCCCCACCTGACCGTGCTGCACCACGAGTGGCGGGACGTGCGGCGCCAGGGGCTC
TACGCCAATATCGACAAGAAGCGCACCTTGCTGGAAGCGATGAAGCGCAACCGGCTGGCCGGAAGGCCGCCCCTGGCGGG
GATCCGCCGGGAGGACCTGCGCTTCCGGACCTGGGATGAGGCCGAGATCCCCGGAGCCAGCGCCGTGCTGATCATCATGA
TGGATACCTCGGGTTCCATGGGCACGGGGGAGAAGTACATCGCCCGCAGCCTCTGCCACTGGATGGTCCGCTTCCTCCGC
ACCCGGTATGAGCGGGTGAAGCTCCACTTCGTCGCCCACACCACCGAGGCGAAGGAGATGGACGAGGAGTCTTTCTTCAC
CCGGGGCGAATCCGGCGGCACCCGCTGCTCCTCGGCCTACGAGTATGCCCTGCAGCTCATCGACCGGCGGTACCCGCCCG
ACCGGCACAACCTCTACGCCTTCCACTTCTCCGACGGCGACAACCTCATCTCGGACAACCCCCGGGCGGTGGCCCTGCTG
CGGAAGCTGCTGGAACGCTGCGCGCTGGTGGGCTACGGGCAGATCGAGACGCAGCCCCAGTACCTCTCCATGCCCTACTA
CCAGCCCAACACGCTCCTCACCCTGTTCCGCGAGGAGATCGACCACCCGCGCTTCGTCACCGCCCTGATCCGGGACCGCT
CGGAGATCTACGCGGCCTTGCGGGCCTTCTTCCCGCGGCCGGGCGCCGGCGAAAGGGGGGCCGGATGA

Upstream 100 bases:

>100_bases
CCTGCGCCCACGAGCTGCTGCGCTACGTCGGCTCCCTGCTGAGCCGATAGCCACAGGGGCGACCCCGCGCACGCAACATG
CCGCAGAGGAGGCGCGAGCG

Downstream 100 bases:

>100_bases
CGTGGCCTGCGACCTGGACAGGCTGGGGGAGGCGGTTGAGGCGGTGGTCCGCCGGGCCCGGGCGGCGGGCCTGGACTTCT
TCCCCCTGCGGTTCGAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MADLPFVISREDWSLHRQGQMDQERHQARIREAIRANLADIVSDEAIIASDGRKVVRLPIRVLREYRFRLDWQKQPRVGE
ADGPVRPGEPVGRPGRAAEAAGGSGAGDEAGEDWFETDVPLEELEELLFAELSLPHLEPKQEPHLTVLHHEWRDVRRQGL
YANIDKKRTLLEAMKRNRLAGRPPLAGIRREDLRFRTWDEAEIPGASAVLIIMMDTSGSMGTGEKYIARSLCHWMVRFLR
TRYERVKLHFVAHTTEAKEMDEESFFTRGESGGTRCSSAYEYALQLIDRRYPPDRHNLYAFHFSDGDNLISDNPRAVALL
RKLLERCALVGYGQIETQPQYLSMPYYQPNTLLTLFREEIDHPRFVTALIRDRSEIYAALRAFFPRPGAGERGAG

Sequences:

>Translated_395_residues
MADLPFVISREDWSLHRQGQMDQERHQARIREAIRANLADIVSDEAIIASDGRKVVRLPIRVLREYRFRLDWQKQPRVGE
ADGPVRPGEPVGRPGRAAEAAGGSGAGDEAGEDWFETDVPLEELEELLFAELSLPHLEPKQEPHLTVLHHEWRDVRRQGL
YANIDKKRTLLEAMKRNRLAGRPPLAGIRREDLRFRTWDEAEIPGASAVLIIMMDTSGSMGTGEKYIARSLCHWMVRFLR
TRYERVKLHFVAHTTEAKEMDEESFFTRGESGGTRCSSAYEYALQLIDRRYPPDRHNLYAFHFSDGDNLISDNPRAVALL
RKLLERCALVGYGQIETQPQYLSMPYYQPNTLLTLFREEIDHPRFVTALIRDRSEIYAALRAFFPRPGAGERGAG
>Mature_394_residues
ADLPFVISREDWSLHRQGQMDQERHQARIREAIRANLADIVSDEAIIASDGRKVVRLPIRVLREYRFRLDWQKQPRVGEA
DGPVRPGEPVGRPGRAAEAAGGSGAGDEAGEDWFETDVPLEELEELLFAELSLPHLEPKQEPHLTVLHHEWRDVRRQGLY
ANIDKKRTLLEAMKRNRLAGRPPLAGIRREDLRFRTWDEAEIPGASAVLIIMMDTSGSMGTGEKYIARSLCHWMVRFLRT
RYERVKLHFVAHTTEAKEMDEESFFTRGESGGTRCSSAYEYALQLIDRRYPPDRHNLYAFHFSDGDNLISDNPRAVALLR
KLLERCALVGYGQIETQPQYLSMPYYQPNTLLTLFREEIDHPRFVTALIRDRSEIYAALRAFFPRPGAGERGAG

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=431, Percent_Identity=25.5220417633411, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014230
- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 45290; Mature: 45159

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLPFVISREDWSLHRQGQMDQERHQARIREAIRANLADIVSDEAIIASDGRKVVRLPI
CCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
RVLREYRFRLDWQKQPRVGEADGPVRPGEPVGRPGRAAEAAGGSGAGDEAGEDWFETDVP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHCCCCC
LEELEELLFAELSLPHLEPKQEPHLTVLHHEWRDVRRQGLYANIDKKRTLLEAMKRNRLA
HHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCC
GRPPLAGIRREDLRFRTWDEAEIPGASAVLIIMMDTSGSMGTGEKYIARSLCHWMVRFLR
CCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TRYERVKLHFVAHTTEAKEMDEESFFTRGESGGTRCSSAYEYALQLIDRRYPPDRHNLYA
HHHHHEEEEEEEECCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
FHFSDGDNLISDNPRAVALLRKLLERCALVGYGQIETQPQYLSMPYYQPNTLLTLFREEI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHC
DHPRFVTALIRDRSEIYAALRAFFPRPGAGERGAG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ADLPFVISREDWSLHRQGQMDQERHQARIREAIRANLADIVSDEAIIASDGRKVVRLPI
CCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
RVLREYRFRLDWQKQPRVGEADGPVRPGEPVGRPGRAAEAAGGSGAGDEAGEDWFETDVP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHCCCCC
LEELEELLFAELSLPHLEPKQEPHLTVLHHEWRDVRRQGLYANIDKKRTLLEAMKRNRLA
HHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCC
GRPPLAGIRREDLRFRTWDEAEIPGASAVLIIMMDTSGSMGTGEKYIARSLCHWMVRFLR
CCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TRYERVKLHFVAHTTEAKEMDEESFFTRGESGGTRCSSAYEYALQLIDRRYPPDRHNLYA
HHHHHEEEEEEEECCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
FHFSDGDNLISDNPRAVALLRKLLERCALVGYGQIETQPQYLSMPYYQPNTLLTLFREEI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHC
DHPRFVTALIRDRSEIYAALRAFFPRPGAGERGAG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA