| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fbpB [H]
Identifier: 51892293
GI number: 51892293
Start: 1284828
End: 1286486
Strand: Reverse
Name: fbpB [H]
Synonym: STH1155
Alternate gene names: 51892293
Gene position: 1286486-1284828 (Counterclockwise)
Preceding gene: 51892294
Following gene: 51892292
Centisome position: 36.08
GC content: 66.85
Gene sequence:
>1659_bases GTGATGGCGGGCGCGCGGTTCTGGCGGAAGTGGACGTTCTGGCACTGGGTGACCGCAGTCTCGCTGCTCGTCCTGGCGGT GGTGCTGGTCTACCCGGTGGGCCAGCTGCTGATCAAGTCCTTCGTCGCCAAGGACGGCGGCTTCACCCTGAAGAACTACG TCACCTTCCTGAGCAAGCGATACTACCGGCTGGCCCTGACCAACAGCCTCTGGGTCTGCACGGTCTCCACGATCATCGCC ACGGCCATCGGCGTCCCCATGGCCTTCCTGCTGACCCGGTACCGGCTGCCGGGGAAGCCCCTCATCCGCACCCTGATCAT CCTGTCGCTGCTCTCGCCGCCCTTCATCGGCACGTATTCCTGGATCGTGCTCCTGGGGCGGGCGGGCATCATCACCCGGG CCATGGAGGCCATCGGGATCACGCTCCCCACCATCTACGGCCCCCGGGGGATCATCCTGGTGTTCTCCCTCCACTTCTTC CCCTACGTCTACCTGTTCACGTCCGCGGCCCTGCAGTCCATCGACCGGTCGCTGGAAGAGGCCGCCGCGAACCTGGGCGT GAACGGCTGGACCCGCTTCCGCACCGTCACCCTGCCCCTGGTGCTGCCGGCGATCTCCGCCGGCGCCCTGATGGCGTTCA TGTCCGCGCTGGCCGACTTCGGCACGCCGCAGCTCATCGGCGAGGGCTTCCAGCTCCTGCCCATCGCCGCCTACTCCGAG TACATGAACGAGATCGGCGGCAACCCCGGCATGGCCGGCGCCCTGTCGATGGGGCTGGTGGTCATCTCGGCCGTGGCCCT CTTCCTGCAGCGGTGGGTCACGCGCAGGAGCTTCTCCATGAGCAGCCTGCGGCCGCCTGAGGTGGTCGACCTGCCGCTGG GCCGGAAGATCCTCGCCACCGCCTTCTGCTACCTGGTGGTGCTGGTGGCGATCCTGCCCCAGGTGGTCGTGGTCGTCTCC TCGTTCCGCAAGACCAAGGGGCCGATCTTCCTGAGCGAGTTCGGACTGGACAACTACATCACCATCTTCGACCGGGTGCC CGGGGCGGTGGCCAATACGTTCCGGCTCTCCACCGTGGCCATCGTCATCATGGTGATTGCCGGCCTGCTGATGGCCTACG TGATCACCCGGCGGCGCAGCGCGGCCACGGCGGCGCTGGACGTCATGCTCCTGGTCCCCTACGTGCTGCCGGGCACGGTC ATCGGCATCGCGCTGGTCACCGCCTTCAACCGGCCGCCGCTGGTCCTCACCGGCACGGCGACCATCCTCATCCTCTCCTA CGTGATCCGCAAGATCAGCTACACCGTCCGCTCCGCCTCGTCGGTGCTGACCTCCCTCGACCCCTCGCTGGAGGAAGCTT CCATTAACCTGGGCGTGGGGCCGGTGGCCTCGTTCTTCCGGGTGACGGCGCCGCTGGTCTTCAAGGGCGTGCTCGCAGGC GCGGTGCTCTCGTGGGTGACCACCATCAACGAGCTCTCCAGCACCATCATCCTCTACCATGCGGGCACGATCACCATGCC GGTGGCCATCTACTCGCAGGTCATCTCCGACAACTTCGGCCTGGCCGCCGCACTCAGCACGATCCTGACCCTGGCGACGG TGGTCTCGCTCTGGCTGTTCAACAAGCTGGCGGGCAAGGACAGCGGCCTGCTGATGTAG
Upstream 100 bases:
>100_bases TCCCCAACGAGATCGACCCGCCCCGGGTCGGCGAGCAGGCCACCTTCGGCTTCCGGCGCGCCGCGGCGGCGGTCTTCGGC GCACAGGGCGAGGTGTTGCC
Downstream 100 bases:
>100_bases CTCTGACAGCGGGGGCCCGATTCTGCGGCGCGCAACCGCGCCGCCACACAGGAGGTCGTTCACGTGGCGATCAAGGCGGT CATCTTTGACCTGGGCGGCG
Product: ABC transporter permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM
Sequences:
>Translated_552_residues MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM >Mature_552_residues MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKRYYRLALTNSLWVCTVSTIIA TAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYSWIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFF PYVYLFTSAALQSIDRSLEEAAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILATAFCYLVVLVAILPQVVVVVS SFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVAIVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTV IGIALVTAFNRPPLVLTGTATILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLFNKLAGKDSGLLM
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=213, Percent_Identity=32.3943661971831, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1787713, Length=236, Percent_Identity=30.5084745762712, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787368, Length=230, Percent_Identity=28.2608695652174, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1787369, Length=226, Percent_Identity=26.5486725663717, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787080, Length=182, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1788764, Length=147, Percent_Identity=29.9319727891156, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 59695; Mature: 59695
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YYRLALTNSLWVCTVSTIIATAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYS HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH WIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFFPYVYLFTSAALQSIDRSLEE HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILAT HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHH AFCYLVVLVAILPQVVVVVSSFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHCCCCHHHHHHHHHHHH IVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTVIGIALVTAFNRPPLVLTGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH TILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLF HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NKLAGKDSGLLM HHHCCCCCCCCC >Mature Secondary Structure MMAGARFWRKWTFWHWVTAVSLLVLAVVLVYPVGQLLIKSFVAKDGGFTLKNYVTFLSKR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YYRLALTNSLWVCTVSTIIATAIGVPMAFLLTRYRLPGKPLIRTLIILSLLSPPFIGTYS HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH WIVLLGRAGIITRAMEAIGITLPTIYGPRGIILVFSLHFFPYVYLFTSAALQSIDRSLEE HHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAANLGVNGWTRFRTVTLPLVLPAISAGALMAFMSALADFGTPQLIGEGFQLLPIAAYSE HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH YMNEIGGNPGMAGALSMGLVVISAVALFLQRWVTRRSFSMSSLRPPEVVDLPLGRKILAT HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHH AFCYLVVLVAILPQVVVVVSSFRKTKGPIFLSEFGLDNYITIFDRVPGAVANTFRLSTVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHCCCCHHHHHHHHHHHH IVIMVIAGLLMAYVITRRRSAATAALDVMLLVPYVLPGTVIGIALVTAFNRPPLVLTGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHH TILILSYVIRKISYTVRSASSVLTSLDPSLEEASINLGVGPVASFFRVTAPLVFKGVLAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVLSWVTTINELSSTIILYHAGTITMPVAIYSQVISDNFGLAAALSTILTLATVVSLWLF HHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NKLAGKDSGLLM HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]