Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892215

Identifier: 51892215

GI number: 51892215

Start: 1191346

End: 1192347

Strand: Reverse

Name: 51892215

Synonym: STH1077

Alternate gene names: NA

Gene position: 1192347-1191346 (Counterclockwise)

Preceding gene: 51892225

Following gene: 51892209

Centisome position: 33.44

GC content: 70.26

Gene sequence:

>1002_bases
GTGCGGATCAGGACCATCGCAACGGGGCTGCTCCTGGCGGCTGCCCTGGTCGGTTGCAGCCTCGGGCCGGACCGCCCCTT
GACCGAACTTCCGGAGGGGGCGGAGTTTGCTCCGGCGGGCGCCGTGTCGGGCTTCGCAATCCGGGGGGAGTTGCACCTCT
ACCCGCACCACGAACTGGTGGGCGGCGGGCTGGCCTCCTTCATCGTGCACGTGGAGTCTCTGTCTGACGAAGGCGTGCGA
GGCCTGCGCATGGCCGTTTTCTACCCCGAAGAGATCGCCCTGGTGAGCGACGTCGAGCCCTACCTGGAGTCGCCGCGCGG
CTACGATCTCACCCCGGACCAACCGTCCTACGGCCTGGGGCGGACCTTCACGTTCCCCGACTGGGGCCAGGCGCACGTCG
TACGGCAACTGGCCGAGAAGCCGCTCAGGGTGCACCTGGTCTGGGACGGCGGCGAGCAGTTCCTGGAGGTGCCGCCCGAA
GCCATTCGCGTGACGCAGAGCGATGAGCCCCGCCGGTTGGCCAACGACCCGGATCTGTTCAGTTTCCCCACCCACCCCGC
CTTCCTGGATCACCCGCCGTTCTCGGAAGGCCGCTACCTGTCGCGGGCCAGGGACGTGACCGCGGCCGACCTGCTGGCGT
GGTACCGGGCCGAGATGCCGGCCAGTGGATGGGAGGCCCTGCCCGCCCCTGACCGGGCGCTGCTCTTCCGGAAAGGGGAG
ATGTTCCTCAGCCTCGCCGCGGCCGATGAACCCGACGGGACGACGGTCATGTGGTCTCACCTGCGCGGTACCGCCGAGGT
GCCCGAGGACGCGGCCGTCCGGATCGTCCGGGCCAGGTACCCCGAGAGCCGGGAGAACCAGTGGGTGGCGACATACCTCG
CCGACGGCGCGGGTTCGGGGGCGGATTCCCCCGTGTGGGAGGTCCGGGGCCTGCGGGATGGCAAGGTCTGGGTCACTGCC
TGGGTGGATGCCGTGACCGCCGAACTGCGGGTCGCGGAGTAG

Upstream 100 bases:

>100_bases
GAAAAAGCACCGTCTCCTACCTGCCGGCCCCCCAAACGCGGAACCTTGATGCGTGCAGACCGTGTAATGCATAAGTCTTT
TCAACGCGCAGGTGATGACC

Downstream 100 bases:

>100_bases
CCGCGAAGACTGCCCCGCCGCTGCGGCGGGGCAGTTTCTTTGGCGCGGGTTCACAGCTTGACCTTGTTCCCCTCCCAGTA
CTTCAGCAGCGGGTAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRIRTIATGLLLAAALVGCSLGPDRPLTELPEGAEFAPAGAVSGFAIRGELHLYPHHELVGGGLASFIVHVESLSDEGVR
GLRMAVFYPEEIALVSDVEPYLESPRGYDLTPDQPSYGLGRTFTFPDWGQAHVVRQLAEKPLRVHLVWDGGEQFLEVPPE
AIRVTQSDEPRRLANDPDLFSFPTHPAFLDHPPFSEGRYLSRARDVTAADLLAWYRAEMPASGWEALPAPDRALLFRKGE
MFLSLAAADEPDGTTVMWSHLRGTAEVPEDAAVRIVRARYPESRENQWVATYLADGAGSGADSPVWEVRGLRDGKVWVTA
WVDAVTAELRVAE

Sequences:

>Translated_333_residues
MRIRTIATGLLLAAALVGCSLGPDRPLTELPEGAEFAPAGAVSGFAIRGELHLYPHHELVGGGLASFIVHVESLSDEGVR
GLRMAVFYPEEIALVSDVEPYLESPRGYDLTPDQPSYGLGRTFTFPDWGQAHVVRQLAEKPLRVHLVWDGGEQFLEVPPE
AIRVTQSDEPRRLANDPDLFSFPTHPAFLDHPPFSEGRYLSRARDVTAADLLAWYRAEMPASGWEALPAPDRALLFRKGE
MFLSLAAADEPDGTTVMWSHLRGTAEVPEDAAVRIVRARYPESRENQWVATYLADGAGSGADSPVWEVRGLRDGKVWVTA
WVDAVTAELRVAE
>Mature_333_residues
MRIRTIATGLLLAAALVGCSLGPDRPLTELPEGAEFAPAGAVSGFAIRGELHLYPHHELVGGGLASFIVHVESLSDEGVR
GLRMAVFYPEEIALVSDVEPYLESPRGYDLTPDQPSYGLGRTFTFPDWGQAHVVRQLAEKPLRVHLVWDGGEQFLEVPPE
AIRVTQSDEPRRLANDPDLFSFPTHPAFLDHPPFSEGRYLSRARDVTAADLLAWYRAEMPASGWEALPAPDRALLFRKGE
MFLSLAAADEPDGTTVMWSHLRGTAEVPEDAAVRIVRARYPESRENQWVATYLADGAGSGADSPVWEVRGLRDGKVWVTA
WVDAVTAELRVAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36560; Mature: 36560

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRTIATGLLLAAALVGCSLGPDRPLTELPEGAEFAPAGAVSGFAIRGELHLYPHHELV
CEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCHHHH
GGGLASFIVHVESLSDEGVRGLRMAVFYPEEIALVSDVEPYLESPRGYDLTPDQPSYGLG
HCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHCCHHHHCCCCCCCCCCCCCCCCCC
RTFTFPDWGQAHVVRQLAEKPLRVHLVWDGGEQFLEVPPEAIRVTQSDEPRRLANDPDLF
CEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHCCHHHEEECCCCCCHHHCCCCCCC
SFPTHPAFLDHPPFSEGRYLSRARDVTAADLLAWYRAEMPASGWEALPAPDRALLFRKGE
CCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
MFLSLAAADEPDGTTVMWSHLRGTAEVPEDAAVRIVRARYPESRENQWVATYLADGAGSG
EEEEEEECCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEECCCCCC
ADSPVWEVRGLRDGKVWVTAWVDAVTAELRVAE
CCCCCEEECCCCCCCEEEEEEHHHHHHEEEECC
>Mature Secondary Structure
MRIRTIATGLLLAAALVGCSLGPDRPLTELPEGAEFAPAGAVSGFAIRGELHLYPHHELV
CEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCHHHH
GGGLASFIVHVESLSDEGVRGLRMAVFYPEEIALVSDVEPYLESPRGYDLTPDQPSYGLG
HCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEHHCCHHHHCCCCCCCCCCCCCCCCCC
RTFTFPDWGQAHVVRQLAEKPLRVHLVWDGGEQFLEVPPEAIRVTQSDEPRRLANDPDLF
CEECCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHCCHHHEEECCCCCCHHHCCCCCCC
SFPTHPAFLDHPPFSEGRYLSRARDVTAADLLAWYRAEMPASGWEALPAPDRALLFRKGE
CCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
MFLSLAAADEPDGTTVMWSHLRGTAEVPEDAAVRIVRARYPESRENQWVATYLADGAGSG
EEEEEEECCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCCCCEEEEEEECCCCCC
ADSPVWEVRGLRDGKVWVTAWVDAVTAELRVAE
CCCCCEEECCCCCCCEEEEEEHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA