Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892162

Identifier: 51892162

GI number: 51892162

Start: 1137977

End: 1138672

Strand: Reverse

Name: 51892162

Synonym: STH1024

Alternate gene names: NA

Gene position: 1138672-1137977 (Counterclockwise)

Preceding gene: 51892166

Following gene: 51892160

Centisome position: 31.93

GC content: 73.13

Gene sequence:

>696_bases
ATGACGGTGCAGGCGACAACCCCCGCGACCTCCGAGCGCTCGGGCCGGATTCCCCGGGCCGTCCCGGTTCTGGCCTTCCT
CTGCGCCGCGCTCGTCGGCCTGTGGTGGCGGCTGCCGCTCCTGGTGGCACCCGTGGCCGACTTCGAACAGGGTCCCGGCG
GAACCGAGGCTTACGTCACCGTGGCCACTCAGATTCGGGAGCAGTCCGCGTCCTTCTGGACGGGCGGCGACGTGCACCTG
CGCCTGAGCGAGGCCGAGGTGAGCGGCATGCTCTCCTCTGCCCTGCTGAGCGGCGGCTCGCCCGACGGTCCGCTGGCTCG
GGTGCGCGGCGGGGTGGACGACGGGGTCCTGCTGGTGGAGGCGGTGGTGGCGCCGCCAGCCGACCGGGTTCCGGCGCGGC
TCGCCGGTCCCGTCGGGCTCCGGCTGCGGCTGGCGCCCGAGGTGGACGAGACCGGGGTGATCCAGTTCCGGATCACCGGG
GCCCACGTCGGGAAGATCCCCGTGTCGCCCCACCTGATCCGGCTGGCGGGCTGGCTCCTCCAACCCCGGTGGCAGGGGTA
CGACGCCCGCGAGGCCGCCTTCATCCTGCCGGTCAGCGACATGATCTCCCAGGCCCTGGGTCGGCGCATCGAGATCCGGT
CGTTCACGGCCGGGCAGGGGCAGCTCAGCCTGACCATCGCCATGCCCGAGTACTGA

Upstream 100 bases:

>100_bases
GGCGAACTCCAGGAACCGGAGGAATTCCGCAGTTGAACCGTCAGCGAACAGGATCATATAATTAATATGCGTTCTTAACC
ATACATACGGAGTCGATGAC

Downstream 100 bases:

>100_bases
GGCCCGGAGCGGGTTATCCCCGCTCCGGGCCTAGTTCAACAGCCCCCGGCGCATGGCCTCCGCTACCGCCTGGGTGCGGT
TCTGCACCCCCATCTTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTVQATTPATSERSGRIPRAVPVLAFLCAALVGLWWRLPLLVAPVADFEQGPGGTEAYVTVATQIREQSASFWTGGDVHL
RLSEAEVSGMLSSALLSGGSPDGPLARVRGGVDDGVLLVEAVVAPPADRVPARLAGPVGLRLRLAPEVDETGVIQFRITG
AHVGKIPVSPHLIRLAGWLLQPRWQGYDAREAAFILPVSDMISQALGRRIEIRSFTAGQGQLSLTIAMPEY

Sequences:

>Translated_231_residues
MTVQATTPATSERSGRIPRAVPVLAFLCAALVGLWWRLPLLVAPVADFEQGPGGTEAYVTVATQIREQSASFWTGGDVHL
RLSEAEVSGMLSSALLSGGSPDGPLARVRGGVDDGVLLVEAVVAPPADRVPARLAGPVGLRLRLAPEVDETGVIQFRITG
AHVGKIPVSPHLIRLAGWLLQPRWQGYDAREAAFILPVSDMISQALGRRIEIRSFTAGQGQLSLTIAMPEY
>Mature_230_residues
TVQATTPATSERSGRIPRAVPVLAFLCAALVGLWWRLPLLVAPVADFEQGPGGTEAYVTVATQIREQSASFWTGGDVHLR
LSEAEVSGMLSSALLSGGSPDGPLARVRGGVDDGVLLVEAVVAPPADRVPARLAGPVGLRLRLAPEVDETGVIQFRITGA
HVGKIPVSPHLIRLAGWLLQPRWQGYDAREAAFILPVSDMISQALGRRIEIRSFTAGQGQLSLTIAMPEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24531; Mature: 24399

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQATTPATSERSGRIPRAVPVLAFLCAALVGLWWRLPLLVAPVADFEQGPGGTEAYVT
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEE
VATQIREQSASFWTGGDVHLRLSEAEVSGMLSSALLSGGSPDGPLARVRGGVDDGVLLVE
EEHHHHHHCCCEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEE
AVVAPPADRVPARLAGPVGLRLRLAPEVDETGVIQFRITGAHVGKIPVSPHLIRLAGWLL
EHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECEEECCCCCCHHHHHHHHHHC
QPRWQGYDAREAAFILPVSDMISQALGRRIEIRSFTAGQGQLSLTIAMPEY
CCCCCCCCCCCEEEEEEHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCC
>Mature Secondary Structure 
TVQATTPATSERSGRIPRAVPVLAFLCAALVGLWWRLPLLVAPVADFEQGPGGTEAYVT
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEE
VATQIREQSASFWTGGDVHLRLSEAEVSGMLSSALLSGGSPDGPLARVRGGVDDGVLLVE
EEHHHHHHCCCEECCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEE
AVVAPPADRVPARLAGPVGLRLRLAPEVDETGVIQFRITGAHVGKIPVSPHLIRLAGWLL
EHHCCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECEEECCCCCCHHHHHHHHHHC
QPRWQGYDAREAAFILPVSDMISQALGRRIEIRSFTAGQGQLSLTIAMPEY
CCCCCCCCCCCEEEEEEHHHHHHHHHCCEEEEEEEECCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA