| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is ywrA [H]
Identifier: 51892148
GI number: 51892148
Start: 1126546
End: 1127097
Strand: Reverse
Name: ywrA [H]
Synonym: STH1010
Alternate gene names: 51892148
Gene position: 1127097-1126546 (Counterclockwise)
Preceding gene: 51892150
Following gene: 51892147
Centisome position: 31.61
GC content: 66.67
Gene sequence:
>552_bases ATGCAGTGGAAGACCCTGCTTGACCTGTTCATCGGTTTTGGCCGTGCGACGCTCCTGGGGTTCGGCGGAGGGCCGTCCAT CGTCCCCCTGTACGAGCACGAGGCCGTGGAAGTGTTCGCCTGGGTGAGCCGGGAAGAGTTCGGAACAGCCCTGGCCATGG GGAACGCGCTGCCCGGGCCCATCGCGACCAAGCTGACCATGTACATCGGCTACCGGGTGGCCGGATGGCCGGGTGCGATC GTCGCCCTGCTCGCCGTGACCCTGCCCGTCGGGCTGATCATGATCGCCCTGGCGGGGCTGATGCTCCGGTTCAAGGACAG CCCGGTCCTGAAGGGGATGGTAAACGGCATCCGTCCGGTGGTCTTCGTGATGCTCGCGATGCTCGCCTGGGACTTCGCCG GCTACGCCTTCCAGCCCAAGGGCACGGGGCTCCTGAGCTGGCTGCCCTTCGGCATCGCCGCCGCCTACTTCATCTCGGTG CAGTACCTGAAGCTCTCCCCCATCTACGGCGTGGTCGCCTCGCTGGTCATCGGCGCACTCCTGCTCCGGTAG
Upstream 100 bases:
>100_bases GCCTGAAACTTACCTGCAGAGAAGATTCGCCGGCTGTCGCAGATCCGCCCTTCGATCGGTCACGCTCCTCATCACATCCC GGAAAGGTAGGTTGGTCGCG
Downstream 100 bases:
>100_bases CCCGCTGCCGCAGCCCGGCAGCAAATTTCGCCGAAGCGGCAGGTTTCTCGGTCGCAAGGGCGAAGAGGTATGCCGGGTCC GTGACTCTCACTTAGGAGGC
Product: chromate efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MQWKTLLDLFIGFGRATLLGFGGGPSIVPLYEHEAVEVFAWVSREEFGTALAMGNALPGPIATKLTMYIGYRVAGWPGAI VALLAVTLPVGLIMIALAGLMLRFKDSPVLKGMVNGIRPVVFVMLAMLAWDFAGYAFQPKGTGLLSWLPFGIAAAYFISV QYLKLSPIYGVVASLVIGALLLR
Sequences:
>Translated_183_residues MQWKTLLDLFIGFGRATLLGFGGGPSIVPLYEHEAVEVFAWVSREEFGTALAMGNALPGPIATKLTMYIGYRVAGWPGAI VALLAVTLPVGLIMIALAGLMLRFKDSPVLKGMVNGIRPVVFVMLAMLAWDFAGYAFQPKGTGLLSWLPFGIAAAYFISV QYLKLSPIYGVVASLVIGALLLR >Mature_183_residues MQWKTLLDLFIGFGRATLLGFGGGPSIVPLYEHEAVEVFAWVSREEFGTALAMGNALPGPIATKLTMYIGYRVAGWPGAI VALLAVTLPVGLIMIALAGLMLRFKDSPVLKGMVNGIRPVVFVMLAMLAWDFAGYAFQPKGTGLLSWLPFGIAAAYFISV QYLKLSPIYGVVASLVIGALLLR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 19623; Mature: 19623
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWKTLLDLFIGFGRATLLGFGGGPSIVPLYEHEAVEVFAWVSREEFGTALAMGNALPGP CCHHHHHHHHHHCCHHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH IATKLTMYIGYRVAGWPGAIVALLAVTLPVGLIMIALAGLMLRFKDSPVLKGMVNGIRPV HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VFVMLAMLAWDFAGYAFQPKGTGLLSWLPFGIAAAYFISVQYLKLSPIYGVVASLVIGAL HHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHH LLR HCC >Mature Secondary Structure MQWKTLLDLFIGFGRATLLGFGGGPSIVPLYEHEAVEVFAWVSREEFGTALAMGNALPGP CCHHHHHHHHHHCCHHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH IATKLTMYIGYRVAGWPGAIVALLAVTLPVGLIMIALAGLMLRFKDSPVLKGMVNGIRPV HHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VFVMLAMLAWDFAGYAFQPKGTGLLSWLPFGIAAAYFISVQYLKLSPIYGVVASLVIGAL HHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHH LLR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]