| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892132
Identifier: 51892132
GI number: 51892132
Start: 1113142
End: 1113528
Strand: Reverse
Name: 51892132
Synonym: STH994
Alternate gene names: NA
Gene position: 1113528-1113142 (Counterclockwise)
Preceding gene: 51892133
Following gene: 51892131
Centisome position: 31.23
GC content: 62.79
Gene sequence:
>387_bases ATGCGTCCGGCAGGCCGCTATACTGAGGGGGAAAGGGGGTCCTTCGCAGTGGCCGGTGATCGTTGGAAGGGCGCCACAAC CGAACGGGGGAAACCGCGGGTCTACATTCAGCAGTACCTCGACCTGAAGCTTCCGGAGGAGCGATACAAGCGGATCTGCC AGGAGATGGGGCTGGAGAAGCCCTTCACCGAGGAAGCGGCGACGGCGGTGATGGAGGCGTATCTCGAAGACCTGGCCGAC GGATCCCAATGCGACACGGTGCACCTGCACCGTTCCGGCGGAGACGTGGTCCTCATGACCGTCGTCTCCTTCCCGTACAG TCAGGCCGCTTACGACAGGATGATGGCCGCGTATCTGGCCAAGAAGTCCCTGGGCCAGACCGAATAG
Upstream 100 bases:
>100_bases GGCCATGCAGGAGATGCTGTGCCTGCCCTCCGAGGAGATTCTGCGCCGCCTGGGCTGAGCCGGCTTCCGCCGGCCTCCCC GGGGCACAACCCGGGTTGAG
Downstream 100 bases:
>100_bases CCCGCGCAAGACGAGGAGCCTGCGCTCCTCGCCAGTCTTTTTTGTGGGGACAAGACCATGTTTCATGCGTTATGATAGCG GTGAAGGGGTCCGACCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRPAGRYTEGERGSFAVAGDRWKGATTERGKPRVYIQQYLDLKLPEERYKRICQEMGLEKPFTEEAATAVMEAYLEDLAD GSQCDTVHLHRSGGDVVLMTVVSFPYSQAAYDRMMAAYLAKKSLGQTE
Sequences:
>Translated_128_residues MRPAGRYTEGERGSFAVAGDRWKGATTERGKPRVYIQQYLDLKLPEERYKRICQEMGLEKPFTEEAATAVMEAYLEDLAD GSQCDTVHLHRSGGDVVLMTVVSFPYSQAAYDRMMAAYLAKKSLGQTE >Mature_128_residues MRPAGRYTEGERGSFAVAGDRWKGATTERGKPRVYIQQYLDLKLPEERYKRICQEMGLEKPFTEEAATAVMEAYLEDLAD GSQCDTVHLHRSGGDVVLMTVVSFPYSQAAYDRMMAAYLAKKSLGQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14392; Mature: 14392
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAGRYTEGERGSFAVAGDRWKGATTERGKPRVYIQQYLDLKLPEERYKRICQEMGLEK CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCC PFTEEAATAVMEAYLEDLADGSQCDTVHLHRSGGDVVLMTVVSFPYSQAAYDRMMAAYLA CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHH KKSLGQTE HHHCCCCC >Mature Secondary Structure MRPAGRYTEGERGSFAVAGDRWKGATTERGKPRVYIQQYLDLKLPEERYKRICQEMGLEK CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCC PFTEEAATAVMEAYLEDLADGSQCDTVHLHRSGGDVVLMTVVSFPYSQAAYDRMMAAYLA CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEHHCCCHHHHHHHHHHHHHH KKSLGQTE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA