Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892119

Identifier: 51892119

GI number: 51892119

Start: 1099353

End: 1099679

Strand: Reverse

Name: 51892119

Synonym: STH981

Alternate gene names: NA

Gene position: 1099679-1099353 (Counterclockwise)

Preceding gene: 51892120

Following gene: 51892110

Centisome position: 30.84

GC content: 69.42

Gene sequence:

>327_bases
GTGGACAGCCTGCAGACCCGGCAGCACGAGGTCTCCCGGGATGTCGAACGCGTCGAGCTGGCCGTCGCCCACCTGCTGCG
AATCGGCACCGCCGTCGCCGCAGCGCTCATCTCCGCCGGCCTCGCGGTCACCCTCCTCCAGCTGTCCGTGTCGATCGGCC
CGACCCTGGTGACCGCGGGGATCATCGCCCTCATCTGCACGCCGTTGCTTCGGGTGGCGGCGGCCATGGTCATCTACCTG
CGGCTGGGGGACGTGGTATACGGCGTCATCTGCCTGGCCGTGCTGCTCTTCGTCCTCGCCGGCATGCTGCTCGGCGAAGG
ACACTAG

Upstream 100 bases:

>100_bases
GCTGATGGTCAGGATGAAGGGATCCACCCTCCGCCTCCTCTTTGTCCCGCTGCTGGTGTACGTGGCCGTTCAGATGGCCT
GGAAAGGGGTGACCTACTAG

Downstream 100 bases:

>100_bases
GCCCCTGACGCCACAGGCCCGCCGGGATCCTGCCCGGCGGGCCTGATCTCTTCGCATCGCTCCCGTCCCCGTCGGTACCG
GGCCATCGGCAAGGCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MDSLQTRQHEVSRDVERVELAVAHLLRIGTAVAAALISAGLAVTLLQLSVSIGPTLVTAGIIALICTPLLRVAAAMVIYL
RLGDVVYGVICLAVLLFVLAGMLLGEGH

Sequences:

>Translated_108_residues
MDSLQTRQHEVSRDVERVELAVAHLLRIGTAVAAALISAGLAVTLLQLSVSIGPTLVTAGIIALICTPLLRVAAAMVIYL
RLGDVVYGVICLAVLLFVLAGMLLGEGH
>Mature_108_residues
MDSLQTRQHEVSRDVERVELAVAHLLRIGTAVAAALISAGLAVTLLQLSVSIGPTLVTAGIIALICTPLLRVAAAMVIYL
RLGDVVYGVICLAVLLFVLAGMLLGEGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11271; Mature: 11271

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLQTRQHEVSRDVERVELAVAHLLRIGTAVAAALISAGLAVTLLQLSVSIGPTLVTAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIALICTPLLRVAAAMVIYLRLGDVVYGVICLAVLLFVLAGMLLGEGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSLQTRQHEVSRDVERVELAVAHLLRIGTAVAAALISAGLAVTLLQLSVSIGPTLVTAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIALICTPLLRVAAAMVIYLRLGDVVYGVICLAVLLFVLAGMLLGEGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA