Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51891998

Identifier: 51891998

GI number: 51891998

Start: 970406

End: 971437

Strand: Reverse

Name: 51891998

Synonym: STH860

Alternate gene names: NA

Gene position: 971437-970406 (Counterclockwise)

Preceding gene: 51892001

Following gene: 51891997

Centisome position: 27.24

GC content: 65.31

Gene sequence:

>1032_bases
ATGCGACTGCGGCTGGTGACGGTCCCGGATCGACTCTGGGCCGACCGTTCCATACCGGAAGGCGCCAAGCTAGTGTGGTG
TTACGTTTCCGCCCTCTGCCACCTGCGGAGCGAGTTTACGTATAAGGAGCTGCGGGAGGGCGCCGGTATCAGCCTCCCCA
GCCTGCACAAGTATCTGTCTGTGCTGTCCCGGGCAGGATGGCTGAACTGCGCGCGGATAAGCCTTCGCGTCGTCCGCTGC
GAGATCACCGGGCCCATGGGTGGCCCGCGCCTGGTTCTGCCCACGGATATCCTCTTCGAGAGGCGTCTCCCACGGGGTGC
CTGCTGGACGTGGGGCCTGATCGGCCGGATGGGCGGTCGGTTCGAGTACACGGAGCTGCGGAAGGCCACGGGATACAGTC
AGGATACCCTGAGCAAGCACGTCAGGGCGTTGATTGCGCAGCGCTGGCTCGTAGGCGGCCCTCACCGGAAGGCACGGCGC
GTGATCTACAACGTCCGCGGAGCCAACCCGCGCGCCATTCAACGCGCACAAGAACTGCAGGAACTGGAGCGCGGCCTCCA
GGTAGCCAGGAGCACACCCGGGTACTCGCAGGGCCAGTACATCCTCGCGCGCCTGATTCGGGAGATGTACCCTGGCGTGG
AGGTTCTGGAGAATGCAGAGATCACCGGCCTGGACAACGTCGAGACCCGCGGGCGCCTGCAAGTCGACGTGTACATGCCG
GACCAGAAACTGGCCATCGAGTTTCAGGGCCATCAGCACGCCGGCCCGACCGAACGTTATCCCAGCGTCGAGGAGTTCCG
TGCTCGGCGCAGGCGGGATCTCATCAAGCGGGGACTCTGCCTGGAGAAGGGCATCGAGTTAATTTCGCTGTGGCCGCAGG
ATCTGAGTTGCGCAGGGATCGCGCGGGCGCTCGGCCACCGCCTGCACTTCGCGGGAGCCAGAGAGGACCGCTGGCACGTC
GCTCGCTTTCTCGAGCAGCGGGCGGAGTGGTACCGGAAAGCCGCGGCCAGGAGCCAATGCTCGTCGTTCTGA

Upstream 100 bases:

>100_bases
AGGGATGCAAGCGAACAGAGGGAAGATCTGAGCGAACATTCGCTCGATCTAAGGAAGGAATCCCATCCAGGTATGGCGAA
TCTTTCCATCGGTGATGCGC

Downstream 100 bases:

>100_bases
CAGCGCCGGCCGCGCAACGGAACGCTCGTCGCACGGCCCCTTGAAGCCGACGCGCGGCCAGGGAGCAAACGTGCTTATGG
GCCTGCGCGGCGATTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC
EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR
VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP
DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV
ARFLEQRAEWYRKAAARSQCSSF

Sequences:

>Translated_343_residues
MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC
EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR
VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP
DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV
ARFLEQRAEWYRKAAARSQCSSF
>Mature_343_residues
MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLSVLSRAGWLNCARISLRVVRC
EITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGRFEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARR
VIYNVRGANPRAIQRAQELQELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP
DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGIARALGHRLHFAGAREDRWHV
ARFLEQRAEWYRKAAARSQCSSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39340; Mature: 39340

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLS
CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH
VLSRAGWLNCARISLRVVRCEITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGR
HHHHCCCCEEEEEEEEEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHCCCC
FEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARRVIYNVRGANPRAIQRAQELQ
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
ELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEC
DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGI
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCCCHHHHH
ARALGHRLHFAGAREDRWHVARFLEQRAEWYRKAAARSQCSSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLRLVTVPDRLWADRSIPEGAKLVWCYVSALCHLRSEFTYKELREGAGISLPSLHKYLS
CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHH
VLSRAGWLNCARISLRVVRCEITGPMGGPRLVLPTDILFERRLPRGACWTWGLIGRMGGR
HHHHCCCCEEEEEEEEEEEEEEECCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHCCCC
FEYTELRKATGYSQDTLSKHVRALIAQRWLVGGPHRKARRVIYNVRGANPRAIQRAQELQ
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
ELERGLQVARSTPGYSQGQYILARLIREMYPGVEVLENAEITGLDNVETRGRLQVDVYMP
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEC
DQKLAIEFQGHQHAGPTERYPSVEEFRARRRRDLIKRGLCLEKGIELISLWPQDLSCAGI
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHEEECCCCCHHHHH
ARALGHRLHFAGAREDRWHVARFLEQRAEWYRKAAARSQCSSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA