Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51891854

Identifier: 51891854

GI number: 51891854

Start: 788776

End: 789963

Strand: Reverse

Name: 51891854

Synonym: STH716

Alternate gene names: NA

Gene position: 789963-788776 (Counterclockwise)

Preceding gene: 51891855

Following gene: 51891852

Centisome position: 22.15

GC content: 67.59

Gene sequence:

>1188_bases
TTGCTTCAGAAGCTGCAGCTGGTGGCGCGGGAAGGCAGTCTGTCCGTCACCGACGTATATCTCGGCCACATCAAGCGGGA
CGAGGATCGCAAGCTCCTCGCCCACGCCGACGCCTACAGGTGGAGCGACCTCGATCCGCAGCTGCGGGCGATCCTGACGC
AGCACCTGTACCAGGCCATCGAGGGCGCACAGGGGGAGGTCAACTTCCCCTGCATGTACACCGGGGAGGTCCTGCCGGTC
GACAAGGTGGCCTCGGCGGAATACGACCGGCTCCATAACCGCCCGTCGGTGGAGGTGCTGGAGGCCATCCGCGACATGGA
GGAGGTCCACCCCCAGTCCCTGGTGGACCTGGGCAACGTGTTGGCGTACAAGGTGATGGCCGCCGGGGCCATCAAGAATC
ACCTGGTGGCCATTCTGCGGTTCCGGGCGGTGCCGGAGCTCGGGGCCACGCCCCTGCGGTTCAGCTTTGCGACCGTCCTG
GACCTGGAAGATCGGGAAGAGTCGCTCTTCGACGAGCACACCGGCAGCTTCCGCACCCAGGTGCTGAACAACGTGATCAA
GCGTGGCAGCGTCTCCCGGGCCGTGTTCTTCCCCTGCCTCGATGCGGAGGGGAGGGAGATCGCCGACCTCATGGTGTACG
CCGGCAGCGGCGCCGCCGCGTGGTTCAAGGCGCTGGAGGCCACACGCCGATTGAGCCCCCGGCGGGAGGGCCAGGCGCTC
CTCCGGATGATTACCGAGCAGAACGCGACGGGAGAGGTGCCCCACGACCTGTTCCGGCGAATGGGCGCTGACCTGCTGGA
CGAGGCCGCGGACGGGCTCAGCGCCGAATCCGTGGTCCGCAGCATGGAGAAGGCGGTGGGCCACGGCGTCGACCGGCTGG
GCTTCCAGGCCCGCTGGGAGTCGGCGTTCGGCGACCTCTCCTACCGTCCCGCCTACAACTCGCTCTTCGGCGGCGCGGAA
AAGCCGACCCGCATGAAGATGCGGGCCGGCAGCATCGAGATCACCCTGACGCCGGCGGATCTGGAGTCCTTCCGCCAGGT
CACCGTGGGCGACCGGACCTTCATCCTCTTCGCCGTGCCGGAACGGGCACGGGTGGTAGTCGGGAAGGACCTGGACCTGA
AGATCAAGCCGGTCGGGCTGGCGGACATTCAGCGCTGGATGACCGGCGAAGAGGACCCGGCATCCTGA

Upstream 100 bases:

>100_bases
GCTGGCTGCTGCGCAGGATGGGCAGAAAGGCGATGGCATGATACGATAGCACTGCCGTCTCTCGTGCGGCCCACACTCAT
ACCGTTTGGAGGGCGAATCG

Downstream 100 bases:

>100_bases
AGCCCGGCATCCTGCCCGCGCTGGCGGCGGGCCGCCTCCTGGGCGGCCTGGAGGGCGGCATCCAGCTTCCGCAGCAGCCG
GACCCATTTCAGGACGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV
DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL
DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL
LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE
KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS

Sequences:

>Translated_395_residues
MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV
DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL
DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL
LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE
KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS
>Mature_395_residues
MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAIEGAQGEVNFPCMYTGEVLPV
DKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNVLAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVL
DLEDREESLFDEHTGSFRTQVLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL
LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWESAFGDLSYRPAYNSLFGGAE
KPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVPERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43911; Mature: 43911

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAI
CCCHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EGAQGEVNFPCMYTGEVLPVDKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNV
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
LAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVLDLEDREESLFDEHTGSFRTQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHCCHHHHH
VLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL
HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH
LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWE
HHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCHHHHHH
SAFGDLSYRPAYNSLFGGAEKPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVP
HHCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHEECCCCEEEEEECC
ERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS
CCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLQKLQLVAREGSLSVTDVYLGHIKRDEDRKLLAHADAYRWSDLDPQLRAILTQHLYQAI
CCCHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EGAQGEVNFPCMYTGEVLPVDKVASAEYDRLHNRPSVEVLEAIRDMEEVHPQSLVDLGNV
CCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
LAYKVMAAGAIKNHLVAILRFRAVPELGATPLRFSFATVLDLEDREESLFDEHTGSFRTQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHCCHHHHH
VLNNVIKRGSVSRAVFFPCLDAEGREIADLMVYAGSGAAAWFKALEATRRLSPRREGQAL
HHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH
LRMITEQNATGEVPHDLFRRMGADLLDEAADGLSAESVVRSMEKAVGHGVDRLGFQARWE
HHHHHHCCCCCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHCHHHHHH
SAFGDLSYRPAYNSLFGGAEKPTRMKMRAGSIEITLTPADLESFRQVTVGDRTFILFAVP
HHCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHEECCCCEEEEEECC
ERARVVVGKDLDLKIKPVGLADIQRWMTGEEDPAS
CCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA