Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

Click here to switch to the map view.

The map label for this gene is 51598630

Identifier: 51598630

GI number: 51598630

Start: 383050

End: 384186

Strand: Direct

Name: 51598630

Synonym: BG0373

Alternate gene names: NA

Gene position: 383050-384186 (Clockwise)

Preceding gene: 51598623

Following gene: 51598631

Centisome position: 42.36

GC content: 27.53

Gene sequence:

>1137_bases
ATGCAAAATTTTGAAAGCATTATCAAAAATATAAAAAATTCATCGTATTTAATAGACAAGGAATTCTTGGTTTGGCCTGA
GAATGCATTTATTGGAGACAAAAACATTGAGCTTATTGAAAAATGGAAGCTAAAATCATACATTAAAGAAAGAACAAATT
TTTTTAGCGATGATTCTGTTAAAAGAGAATATGAAGAAATACACAAAAAATTCAACGAAGAGGCTATTTCTAGTTACCAT
GTAATAATAAGCAATTTAGAAGAAATTTATGAAAATTGCAAAAGAAATAAAAAAATTTACTACCAAGACATTATGCCTAC
TGTAAAAAAAGTAATAGAATTTTATAAAAAACAGAAAAAAATTTTTATTAAATATTTTAGAATTCCTAAGCTTTCTGCGA
ACTATCACATTATTCATTCAGTAAATACAGCTATCTTAACAGTAGCCCTTGGCAATGAAATGGGACTAAATAACTACAAA
ACAGTAGAGCTTTGTAGTATTGCTCTTTTACATAAAATAGGATTTCTATTTATCCCCTCAAAAATCAGCGAAAAAAAAGA
AACATTAACTGATAAAGAACTAGAAATAATACAAAAATATCCCATAATTAGTTATAAAGTAGCTTCAACAAGCAATTTGT
CACGATCAATATGTTTGACGCTTTTAACACATAAAGAAAATCTAGACGGAACAGGTTATCCTAAAGGACTAACAAGTGAA
AATATAAGCATAGAGTCAAATATAATAGGCGCTGCTAGCGCCTATTCTGCTATCATTTTAGATAAGGCATACAAAAAATC
TTTTAATTCTGGGGCATCTATTATTGAATTAATTAAAGATGCTGACAAAAAATTTGACAAAAGAGTTTTAAAGTTAATAA
TCAATGCAATATCTTCTTGCCCTTTAGACTTTATTGTAGAGCTTAATGACAATTCTATAGCCAAAATAGTAGATATAGAT
GATTCGAACCCAAATCTCCCATACGTAAACTACATAATAAAAAATGGAAAAGTTGTAGACAAAAATGAGCCTAGCGTTCA
GTCTATACCAAACACAAACACAGGAATAAAAAAAATACTCAATCAAGATGAAATAGAATTAATTAAAAATAAACATTCTT
TAGCAGATAGTATATAA

Upstream 100 bases:

>100_bases
TTCAAAAATTGAGATATAATAAGTACATTATACTAATAGATAGACAATTAATAAATAATATGATATACATGGTTAATAGA
GCTTAATTTCAAGGGAATAA

Downstream 100 bases:

>100_bases
GATACTTAAAAGGAGAAAAAACATGATTTTAATCATATCAGCTATGCAAGAAGAAGCAGAAGAAATAAACAAAATGATTG
ATGACAGAGAAGAAGTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH
VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK
TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE
NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID
DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI

Sequences:

>Translated_378_residues
MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH
VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK
TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE
NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID
DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI
>Mature_378_residues
MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH
VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK
TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE
NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID
DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43280; Mature: 43280

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSV
CCCHHHHHHHCCCCCEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
KREYEEIHKKFNEEAISSYHVIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKK
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
IFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYKTVELCSIALLHKIGFLFIPS
HHHHHEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECC
KISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSC
CCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLDFIVELNDNSIAKIVDIDDSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKIL
CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH
NQDEIELIKNKHSLADSI
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSV
CCCHHHHHHHCCCCCEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH
KREYEEIHKKFNEEAISSYHVIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKK
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
IFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYKTVELCSIALLHKIGFLFIPS
HHHHHEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECC
KISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSC
CCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLDFIVELNDNSIAKIVDIDDSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKIL
CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH
NQDEIELIKNKHSLADSI
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]