| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598630
Identifier: 51598630
GI number: 51598630
Start: 383050
End: 384186
Strand: Direct
Name: 51598630
Synonym: BG0373
Alternate gene names: NA
Gene position: 383050-384186 (Clockwise)
Preceding gene: 51598623
Following gene: 51598631
Centisome position: 42.36
GC content: 27.53
Gene sequence:
>1137_bases ATGCAAAATTTTGAAAGCATTATCAAAAATATAAAAAATTCATCGTATTTAATAGACAAGGAATTCTTGGTTTGGCCTGA GAATGCATTTATTGGAGACAAAAACATTGAGCTTATTGAAAAATGGAAGCTAAAATCATACATTAAAGAAAGAACAAATT TTTTTAGCGATGATTCTGTTAAAAGAGAATATGAAGAAATACACAAAAAATTCAACGAAGAGGCTATTTCTAGTTACCAT GTAATAATAAGCAATTTAGAAGAAATTTATGAAAATTGCAAAAGAAATAAAAAAATTTACTACCAAGACATTATGCCTAC TGTAAAAAAAGTAATAGAATTTTATAAAAAACAGAAAAAAATTTTTATTAAATATTTTAGAATTCCTAAGCTTTCTGCGA ACTATCACATTATTCATTCAGTAAATACAGCTATCTTAACAGTAGCCCTTGGCAATGAAATGGGACTAAATAACTACAAA ACAGTAGAGCTTTGTAGTATTGCTCTTTTACATAAAATAGGATTTCTATTTATCCCCTCAAAAATCAGCGAAAAAAAAGA AACATTAACTGATAAAGAACTAGAAATAATACAAAAATATCCCATAATTAGTTATAAAGTAGCTTCAACAAGCAATTTGT CACGATCAATATGTTTGACGCTTTTAACACATAAAGAAAATCTAGACGGAACAGGTTATCCTAAAGGACTAACAAGTGAA AATATAAGCATAGAGTCAAATATAATAGGCGCTGCTAGCGCCTATTCTGCTATCATTTTAGATAAGGCATACAAAAAATC TTTTAATTCTGGGGCATCTATTATTGAATTAATTAAAGATGCTGACAAAAAATTTGACAAAAGAGTTTTAAAGTTAATAA TCAATGCAATATCTTCTTGCCCTTTAGACTTTATTGTAGAGCTTAATGACAATTCTATAGCCAAAATAGTAGATATAGAT GATTCGAACCCAAATCTCCCATACGTAAACTACATAATAAAAAATGGAAAAGTTGTAGACAAAAATGAGCCTAGCGTTCA GTCTATACCAAACACAAACACAGGAATAAAAAAAATACTCAATCAAGATGAAATAGAATTAATTAAAAATAAACATTCTT TAGCAGATAGTATATAA
Upstream 100 bases:
>100_bases TTCAAAAATTGAGATATAATAAGTACATTATACTAATAGATAGACAATTAATAAATAATATGATATACATGGTTAATAGA GCTTAATTTCAAGGGAATAA
Downstream 100 bases:
>100_bases GATACTTAAAAGGAGAAAAAACATGATTTTAATCATATCAGCTATGCAAGAAGAAGCAGAAGAAATAAACAAAATGATTG ATGACAGAGAAGAAGTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI
Sequences:
>Translated_378_residues MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI >Mature_378_residues MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSVKREYEEIHKKFNEEAISSYH VIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKKIFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYK TVELCSIALLHKIGFLFIPSKISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSCPLDFIVELNDNSIAKIVDID DSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKILNQDEIELIKNKHSLADSI
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43280; Mature: 43280
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSV CCCHHHHHHHCCCCCEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH KREYEEIHKKFNEEAISSYHVIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKK HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH IFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYKTVELCSIALLHKIGFLFIPS HHHHHEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECC KISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSC CCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLDFIVELNDNSIAKIVDIDDSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKIL CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH NQDEIELIKNKHSLADSI CCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQNFESIIKNIKNSSYLIDKEFLVWPENAFIGDKNIELIEKWKLKSYIKERTNFFSDDSV CCCHHHHHHHCCCCCEEEECCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCHH KREYEEIHKKFNEEAISSYHVIISNLEEIYENCKRNKKIYYQDIMPTVKKVIEFYKKQKK HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH IFIKYFRIPKLSANYHIIHSVNTAILTVALGNEMGLNNYKTVELCSIALLHKIGFLFIPS HHHHHEECCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECC KISEKKETLTDKELEIIQKYPIISYKVASTSNLSRSICLTLLTHKENLDGTGYPKGLTSE HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NISIESNIIGAASAYSAIILDKAYKKSFNSGASIIELIKDADKKFDKRVLKLIINAISSC CCEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLDFIVELNDNSIAKIVDIDDSNPNLPYVNYIIKNGKVVDKNEPSVQSIPNTNTGIKKIL CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHH NQDEIELIKNKHSLADSI CCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]