| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598623
Identifier: 51598623
GI number: 51598623
Start: 374421
End: 374699
Strand: Direct
Name: 51598623
Synonym: BG0366
Alternate gene names: NA
Gene position: 374421-374699 (Clockwise)
Preceding gene: 51598622
Following gene: 51598630
Centisome position: 41.41
GC content: 24.01
Gene sequence:
>279_bases ATGGCAGACATAGAAAAAACAAATAAAATAAAAGTAGCAGAGCATATTGTAGAATGCTTTGGAGGAATCAAAAATATTAA AAACATCAGCAAAGACATAACGAGAATAAAAATTTTAGTAGACAGCAATTCTTTAGTCAAAAGAGACGATTTAACAAAAA ATGACAACATAATAGGAACTATTAAATCTAATGAACTTACAGAAATTGTAATGAATTTCGAAATAATAGAAGATGTTTAT AATAAAATTTTATATATGATGAATGATCAAAAACAATAA
Upstream 100 bases:
>100_bases TGCCGTTATAAGCATGCATTCTCCAATGGAAATAACTTCTAAATTTGATTTATACAATGCTTATTTAGCATACAAAGCTT TCTACAAGGAATAAATTGCT
Downstream 100 bases:
>100_bases AGCCTCTTTAAGAGGCTTTATTTCATTATCCAATATTCCTCATATAATCAATAACAGATTCAGCTCTCAGCTCTTTATTC AAAATTTTATATATAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: Putative PTS system EIIB component [H]
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MADIEKTNKIKVAEHIVECFGGIKNIKNISKDITRIKILVDSNSLVKRDDLTKNDNIIGTIKSNELTEIVMNFEIIEDVY NKILYMMNDQKQ
Sequences:
>Translated_92_residues MADIEKTNKIKVAEHIVECFGGIKNIKNISKDITRIKILVDSNSLVKRDDLTKNDNIIGTIKSNELTEIVMNFEIIEDVY NKILYMMNDQKQ >Mature_91_residues ADIEKTNKIKVAEHIVECFGGIKNIKNISKDITRIKILVDSNSLVKRDDLTKNDNIIGTIKSNELTEIVMNFEIIEDVYN KILYMMNDQKQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1264
COG function: function code G; Phosphotransferase system IIB components
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR001996 [H]
Pfam domain/function: PF00367 PTS_EIIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10615; Mature: 10483
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS51098 PTS_EIIB_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIEKTNKIKVAEHIVECFGGIKNIKNISKDITRIKILVDSNSLVKRDDLTKNDNIIGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEE IKSNELTEIVMNFEIIEDVYNKILYMMNDQKQ ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADIEKTNKIKVAEHIVECFGGIKNIKNISKDITRIKILVDSNSLVKRDDLTKNDNIIGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEE IKSNELTEIVMNFEIIEDVYNKILYMMNDQKQ ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]