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The map label for this gene is oppC-1 [H]

Identifier: 51598590

GI number: 51598590

Start: 340011

End: 341060

Strand: Direct

Name: oppC-1 [H]

Synonym: BG0333

Alternate gene names: 51598590

Gene position: 340011-341060 (Clockwise)

Preceding gene: 51598589

Following gene: 51598592

Centisome position: 37.6

GC content: 31.81

Gene sequence:

>1050_bases
ATGAATAGCATTGAAAAACAAAATGAAGAAAACAGTTCTAAATCCGAAAGAAGAGCTTGGTCAAGATTCAAAGAAAATAA
ACTGGCATTTGGCAGTCTTTTTGTAATTGGATTTTATATCTCAATTGCCATTTTGCGGCCAATATTGCCAATATATAAAT
ACCATACTCAAATAGTAGAACATTCCGATTTACCACCATCTTTCCAGCCTGCTGGAGAACTATGGTACAAAAAAGAAAAA
AAATTTATTGAAAGATTAGCAAAAAAAGAAAAAAGAGAAATAAATGAAAACGAACTAAAAAAACTTGAAGACATAAAAAG
AAAAATAGAGAATGAAGTTCAAATAATAGATAAAAAGGAAGTAAAAGTACATAAAAGAGTGTATTTGCTTGGCACAGACA
ATCTTGGAAGAGACTTGCTTGCAAGATTAATACAAGGCAGCCAAATATCTCTTGCTGTAGGATTTATTGGGGCTTTTTTG
TCTATGATAATAGGAACTATTCTGGGCTCAATAGCAGGTTTTTTTGGGGGATTGCCTGACAAAATAATCACCAAAATAAT
CGAAATTCTTTATGTATTACCCTATTTGCTTATTGTAATAATACTAATGGCAATAATGGAAAGAAGTATAATAGGATTAT
TTATAGCACTTGCATTTGTATCGTGGTTAACAGTAGCTCGAGTTGTAAGAGGTCAGGTACAATCACTATCAAGTTCAGAA
TTTATACAGGCAGCCAAAACCTTTGGTGCAACAAATCAAAGAATAATCTTAAAACACTTAATACCTAATAGCATTGGAAT
GATAGTTATATTCACCACAATAAGAGTTCCAAGCTTTATTATAGCTGAGGCATTTTTATCCTTTTTAGGCCTTGGAATTT
CAGCTCCAATGACAAGCTGGGGAGAATTAGTACAAAATGGAATTGCTACATTTGTTGAATATCCATGGAAAGTTTTTATT
CCTGCTATAGTTATGACAATATTTCTATTATTTATGAACTTTTTAGGTGACGGATTAAGGGATGCATTTGATCCAAAAGA
TAGCATCTAA

Upstream 100 bases:

>100_bases
GGGAGGATTGTTAGTATATTCAATAATACTTCTTATTTCTATATTAATATCAGATATTATATATAAAATGTTAGATCCAA
GAGTATAAAAGGAAATCAAA

Downstream 100 bases:

>100_bases
GGAGAAATTGAATGGAAAAAGAAAATATATTAGAAATAAAAAATTTAGCAATTGAATTTAGATTAAAACATACAACAATT
CATCCTGTAAGAAATATTAA

Product: oligopeptide ABC transporter, permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNSIEKQNEENSSKSERRAWSRFKENKLAFGSLFVIGFYISIAILRPILPIYKYHTQIVEHSDLPPSFQPAGELWYKKEK
KFIERLAKKEKREINENELKKLEDIKRKIENEVQIIDKKEVKVHKRVYLLGTDNLGRDLLARLIQGSQISLAVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKIIEILYVLPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTFGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIIAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI

Sequences:

>Translated_349_residues
MNSIEKQNEENSSKSERRAWSRFKENKLAFGSLFVIGFYISIAILRPILPIYKYHTQIVEHSDLPPSFQPAGELWYKKEK
KFIERLAKKEKREINENELKKLEDIKRKIENEVQIIDKKEVKVHKRVYLLGTDNLGRDLLARLIQGSQISLAVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKIIEILYVLPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTFGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIIAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI
>Mature_349_residues
MNSIEKQNEENSSKSERRAWSRFKENKLAFGSLFVIGFYISIAILRPILPIYKYHTQIVEHSDLPPSFQPAGELWYKKEK
KFIERLAKKEKREINENELKKLEDIKRKIENEVQIIDKKEVKVHKRVYLLGTDNLGRDLLARLIQGSQISLAVGFIGAFL
SMIIGTILGSIAGFFGGLPDKIITKIIEILYVLPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
FIQAAKTFGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIIAEAFLSFLGLGISAPMTSWGELVQNGIATFVEYPWKVFI
PAIVMTIFLLFMNFLGDGLRDAFDPKDSI

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=43.1818181818182, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1787054, Length=219, Percent_Identity=39.2694063926941, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787760, Length=219, Percent_Identity=33.7899543378995, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1789964, Length=219, Percent_Identity=36.986301369863, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789889, Length=219, Percent_Identity=29.6803652968037, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1788505, Length=354, Percent_Identity=25.9887005649718, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI1787549, Length=229, Percent_Identity=29.2576419213974, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39472; Mature: 39472

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIEKQNEENSSKSERRAWSRFKENKLAFGSLFVIGFYISIAILRPILPIYKYHTQIVE
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSDLPPSFQPAGELWYKKEKKFIERLAKKEKREINENELKKLEDIKRKIENEVQIIDKKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKVHKRVYLLGTDNLGRDLLARLIQGSQISLAVGFIGAFLSMIIGTILGSIAGFFGGLPD
HHHHHEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KIITKIIEILYVLPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIQAAKTFGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIIAEAFLSFLGLGISAPMTSW
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GELVQNGIATFVEYPWKVFIPAIVMTIFLLFMNFLGDGLRDAFDPKDSI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNSIEKQNEENSSKSERRAWSRFKENKLAFGSLFVIGFYISIAILRPILPIYKYHTQIVE
CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSDLPPSFQPAGELWYKKEKKFIERLAKKEKREINENELKKLEDIKRKIENEVQIIDKKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VKVHKRVYLLGTDNLGRDLLARLIQGSQISLAVGFIGAFLSMIIGTILGSIAGFFGGLPD
HHHHHEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
KIITKIIEILYVLPYLLIVIILMAIMERSIIGLFIALAFVSWLTVARVVRGQVQSLSSSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIQAAKTFGATNQRIILKHLIPNSIGMIVIFTTIRVPSFIIAEAFLSFLGLGISAPMTSW
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GELVQNGIATFVEYPWKVFIPAIVMTIFLLFMNFLGDGLRDAFDPKDSI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]