| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is pstC [H]
Identifier: 51598477
GI number: 51598477
Start: 219676
End: 220584
Strand: Direct
Name: pstC [H]
Synonym: BG0219
Alternate gene names: 51598477
Gene position: 219676-220584 (Clockwise)
Preceding gene: 51598476
Following gene: 51598478
Centisome position: 24.29
GC content: 30.36
Gene sequence:
>909_bases ATGCATCTAAGCTTAAAGGCAAAAAGAAAGATAGTTGGAATTATTTTCAAATCTTTTATTCTTATATCCGCAATAATAAG CTCCCTATCAATATTTTTTTTAGGTGTGTTTATATTAAAAACCGGAATAGCGCCGTTTATTAATAGCAAAATTAAAATTT TCAACTTTTTATTTAGCACGAATTGGGATCCTACCAATAATCTACAAAAATCTTATGGTATCTTAGCATTCATTATTAAT TCCTTTTTAACTACACTTTTTTCTATTTTAATAGCTTTACCAATTGGATTGGGATTTGCAATATATTTACTTGAAAAAGC AAAAGGATTTTATCGACAATTTTTACAAACAGTAATAGAGCTTTTAGCAGGAATCCCTAGTGTAGTTTATGGATTTTTTG GAAGCACATTTATTGCTACTTTAATAAAAAACATTTTTCAAAGAGAAGACAATCTGGGATACAATTTAATAAGCTCATCA CTCATATTAAGCATAATGATAGTTCCCACAATAATTAGCGTTTGCTATTCATCACTTAAAGCTGTTCCCAAATCTTATAA ATTTGCATCTCTTGCATTAGCAGCAACAGACTGGCAAACAATATATAAGATAATAATACCATCAGCTAGTCGAGGCATTT TAGCAGGAACAATATTATCAATAGGAAGAGCTATTGGAGAAACAGTAGCAGTATTAATGGTTGGAGGAGGCTCTCCTCTT TTTATAAAAAATGTATTTTCGCCCATTAGAACGCTAACTGTAAATATTGCTATGGACATGGGATACGCCTCAGGTACCCA CAGAGAAGCTCTCTTCTCTACAGCTCTAGTATTATTGCTATTTTCAATAATTACAAATTTACTCAAAAATTTTATACTAT CTTCAAATAAAGGGTTAAAGAAAAAGTGA
Upstream 100 bases:
>100_bases TAAAAACATAATTAAATTAAAGGGGAAATTACTTGACTTAATATTAAGTCAAGTAATACAATTTAACACTAACATGAGCT TTAAGGGATTCTTTTAAAAA
Downstream 100 bases:
>100_bases CCAAAACTCAAATAAACAAATTGATTAACAAGTTCTATTTCTTTATAATCAATTTTATTGCATATTTTTTAACAGCACTA TTAATTTTTCTAATAGCGTA
Product: phosphate ABC transporter, permease protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MHLSLKAKRKIVGIIFKSFILISAIISSLSIFFLGVFILKTGIAPFINSKIKIFNFLFSTNWDPTNNLQKSYGILAFIIN SFLTTLFSILIALPIGLGFAIYLLEKAKGFYRQFLQTVIELLAGIPSVVYGFFGSTFIATLIKNIFQREDNLGYNLISSS LILSIMIVPTIISVCYSSLKAVPKSYKFASLALAATDWQTIYKIIIPSASRGILAGTILSIGRAIGETVAVLMVGGGSPL FIKNVFSPIRTLTVNIAMDMGYASGTHREALFSTALVLLLFSIITNLLKNFILSSNKGLKKK
Sequences:
>Translated_302_residues MHLSLKAKRKIVGIIFKSFILISAIISSLSIFFLGVFILKTGIAPFINSKIKIFNFLFSTNWDPTNNLQKSYGILAFIIN SFLTTLFSILIALPIGLGFAIYLLEKAKGFYRQFLQTVIELLAGIPSVVYGFFGSTFIATLIKNIFQREDNLGYNLISSS LILSIMIVPTIISVCYSSLKAVPKSYKFASLALAATDWQTIYKIIIPSASRGILAGTILSIGRAIGETVAVLMVGGGSPL FIKNVFSPIRTLTVNIAMDMGYASGTHREALFSTALVLLLFSIITNLLKNFILSSNKGLKKK >Mature_302_residues MHLSLKAKRKIVGIIFKSFILISAIISSLSIFFLGVFILKTGIAPFINSKIKIFNFLFSTNWDPTNNLQKSYGILAFIIN SFLTTLFSILIALPIGLGFAIYLLEKAKGFYRQFLQTVIELLAGIPSVVYGFFGSTFIATLIKNIFQREDNLGYNLISSS LILSIMIVPTIISVCYSSLKAVPKSYKFASLALAATDWQTIYKIIIPSASRGILAGTILSIGRAIGETVAVLMVGGGSPL FIKNVFSPIRTLTVNIAMDMGYASGTHREALFSTALVLLLFSIITNLLKNFILSSNKGLKKK
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=267, Percent_Identity=30.7116104868914, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1790163, Length=294, Percent_Identity=23.8095238095238, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33063; Mature: 33063
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSLKAKRKIVGIIFKSFILISAIISSLSIFFLGVFILKTGIAPFINSKIKIFNFLFST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHC NWDPTNNLQKSYGILAFIINSFLTTLFSILIALPIGLGFAIYLLEKAKGFYRQFLQTVIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAGIPSVVYGFFGSTFIATLIKNIFQREDNLGYNLISSSLILSIMIVPTIISVCYSSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPKSYKFASLALAATDWQTIYKIIIPSASRGILAGTILSIGRAIGETVAVLMVGGGSPL HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCH FIKNVFSPIRTLTVNIAMDMGYASGTHREALFSTALVLLLFSIITNLLKNFILSSNKGLK HHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KK CC >Mature Secondary Structure MHLSLKAKRKIVGIIFKSFILISAIISSLSIFFLGVFILKTGIAPFINSKIKIFNFLFST CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHC NWDPTNNLQKSYGILAFIINSFLTTLFSILIALPIGLGFAIYLLEKAKGFYRQFLQTVIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAGIPSVVYGFFGSTFIATLIKNIFQREDNLGYNLISSSLILSIMIVPTIISVCYSSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVPKSYKFASLALAATDWQTIYKIIIPSASRGILAGTILSIGRAIGETVAVLMVGGGSPL HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCH FIKNVFSPIRTLTVNIAMDMGYASGTHREALFSTALVLLLFSIITNLLKNFILSSNKGLK HHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]