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The map label for this gene is lmp1

Identifier: 51598471

GI number: 51598471

Start: 211650

End: 214370

Strand: Direct

Name: lmp1

Synonym: BG0212

Alternate gene names: NA

Gene position: 211650-214370 (Clockwise)

Preceding gene: 51598470

Following gene: 51598472

Centisome position: 23.41

GC content: 27.56

Gene sequence:

>2721_bases
ATGAATAAAAAACGTACAAATTTTTCGGTATTATTGCTTTTAATTTTCTTACTTATTTTATCATTTGGAGGCTTTGGTTA
CTATATATATCAAAGCAAATTAAATGACAAAAATCGAGAAATAATGCTAAACGAAGTTAAAAATAGCATAATAGATCGAA
ACTATAAAAAAGCATATTCTGTTGCAAAACTTCTGCAAGACAAATATCCAAAAAATGAAGACATTGCAATGCTTACAAAC
ACACTAGCAGAAATTGCCAACAGCAGTCCTTTTGAATCAAACGAATTACAAAGAGATTCTGCAAATCAAATCCTCGATAA
GATTAAAGGTCAAGAAAATGCAAAAACAAATATAAACGAAAATTTTGATATCGCATTTAATAATAGATATATTAAAGACA
GCGCAATAACAGAAAACTACGCTGACAGAAACGATGACATTGGCATTGAAGATGAAGACATATCTGAATTTAAAAAAAGC
AAAATCCCAGAAAAAGTAAACCAAAATGCAAAACAAAAAGAAGAAGATCAGGCAATACAATCTCCAAATCCCAAATTAAA
CGTTAATGATCAAAAAAATTCATTTAATTTGGAAAAACTAAAAAAAAAATTAAGCGAAAAATCAAATAGTGAAAATATTT
TAAAAAACCCTCAAAATATAGAAAATGATAAGCAAAGCTCAAATTTCTCCAAAGAAAAAAATTCAGAGCATATTTTAAGA
AACCCAGACAATAGTAAATATTCAAAAAATGATAATGCCACATTTTTAAAAGATGTTCCTTTAAATTCTAAAAAAGAAAG
TGATTTTTCTCTGCCCAGTCAAACAATAATAGGAAAAATTCATAGACCATATAGCTACTTAATAAAAAAAGAGCTCTATG
AAATATTAGACGATATTAATACCGGTAGAGTCGCACTTGGAAAAAACAGATTAAAAAAATTAATTAAAAAAGGGTTAAGC
AATAAATTTCAAAAAGTAAATGAGCTGATTGAAAGTTTAAAGAATAAAGACGCCTCCAATTTACTATTAACCTTAATAAA
AAAAGATATTGAGCCAAATTTAATCAATGTACCAAATATACCAAAAGATCCTTACAAAAAAGACATTTTTCAATTAAATA
AAGAAGACAAGAAAACCCAACAATCGGAAGACCTTAAATCTAAGATCTATTCAATAAAACCTACTGATCTTGAAAACCCA
AAAAACAGGCAACAAGCCATTAAAGATCTAAACGAATTCTTAAAAATAAATCCTAATGACACTTATGCCTCTAAAACTTT
GGCTCAAGCTAATAAAATACAGCAATCAGAAAACCTTAAATCTAAGATCTATTCAATAAAACCTACTGATCTTGAAAACC
CAAAAAACAGGCAACAAGCCATTAAAGATCTAAACGAATTCTTGAAAATAAATCCTAATGACACTTACGCCTCTAAAACT
TTGGCTCAAGCTAATAAAATACAGCAATCAGAAAACCTTAAATCTAAGATCTATTCAATAAAACCTACTGATCTTGAAAA
CCCAAAAAACAGGCAACAAGCCATTAAAGATCTAAACGAATTCTTGAAAATAAATCCTAATGACACTTACGCCTATAAAA
CTTTGGCTCAAACTTATGAAAACAATGGAGATTTACTAAAAGCAGAAAATGTATATGAAAAAATTGCTAAGCTCACAAAT
GCCCAAGAAGATTACTATAAACTTGGAATCATTAGATTCAAGCTCAAAAAATATGAACACTCAATAGGGTCATTTGATCA
AACAATAAGGCTCGACCCAAAGCATAAAAAAGCACATAATAACAAAGGAATAGCTTTAATGATGCTAAATAAAAACAAAA
AAGCAGTAGAATCTTTTGAGAAAGCAATACAAATTGATAAAAATTATGATACTGCCTACTACCAAAAAGGAATAGCAGAA
GAAAAAAATGGCGACATGCAACAAGCATTTACAAGTTTTAAAAATGCCTACAATATCGACAAAAAACTCAATTACGCATT
AAAAGCTGGAATAGTATCAAACAACTTAGGCAACTTCAAAAAAAGTGAAGAGTATTTAAGTTTTTTTAATGACAATGCAA
AAAAACCTAACGAAATTGCTATTTACAACCTATCAATAGCAAAATTTGAAAACAATAAACTTGAAGAATCTCTTGAAATA
ATAAACAAGGCCCTCAATTTAAATCCAGAAAAAAGCGAATATTTATATTTAAAAGCATCTATAAATCTTAAAAACGAAAA
TTACCAAAATGCTATATCACTTTACAGCTCAGTAATTGAAAAAAACCCTGAAAATACTTCAGCCTACATAAACCTAGCAA
AAGCATATGAAAAATTGGGGAATAAGGCTCAAGCAATCTCAACTCTTGAAAAGATAATAAACAAAAACAATAAATTGGCC
TTAAACAATCTTGGAATACTTTACAAAAAACAAAAAAATTATCAAAAAGCAATTGAAATTTTTGAAAAAGCAATAAAAAA
TTCAGATATTGAAGCAAAATATAATCTTGCAACCACTCTAATTGAAATTAATGATAACATAAGAGCTAAAGACCTTCTAA
AGGAATATACAAAATTAAAACCAAACAATCCAGAAGCCTTACATGCACTAGGAATAATAGAATATAATGAAAATAATAAT
GATCAAATATTAAGAGAACTTGTCAAAAAATTTCCAAATTACAAAAAAAATGAAAATATTAGAAAAATAATAGGAATATA
A

Upstream 100 bases:

>100_bases
TACGCAAAAGAAGATAAAAATCAAATACTTAAAGATAACCTAGAAACAAATTCTTTAATTGAGCTAGAAAAACTTAATTG
GCAAGAGGAGTTATACATAG

Downstream 100 bases:

>100_bases
ACTTCAATGAACAAAATAAGATTCTTAGATAAATACTTGGTTCAAAAAATAGCAGCGGGAGAATCAATAGATAGACCATG
TTCAATATTAAGAGAATTGC

Product: surface-located membrane protein 1

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Surface-Located Membrane; Tetratricopeptide Repeat Family; Peptidase; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat-Containing Protein; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; O-Linked GlcNAc Transferase; Tetratricopeptide Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; TPR Repeat-Containing ; Serine/Threonine Protein Kinase With TPR Repeats; TPR Domain Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Domain-Containing Protein; M50 Family Peptidase; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Glycosyl Transferase Family Protein; Peptidase S

Number of amino acids: Translated: 906; Mature: 906

Protein sequence:

>906_residues
MNKKRTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLNEVKNSIIDRNYKKAYSVAKLLQDKYPKNEDIAMLTN
TLAEIANSSPFESNELQRDSANQILDKIKGQENAKTNINENFDIAFNNRYIKDSAITENYADRNDDIGIEDEDISEFKKS
KIPEKVNQNAKQKEEDQAIQSPNPKLNVNDQKNSFNLEKLKKKLSEKSNSENILKNPQNIENDKQSSNFSKEKNSEHILR
NPDNSKYSKNDNATFLKDVPLNSKKESDFSLPSQTIIGKIHRPYSYLIKKELYEILDDINTGRVALGKNRLKKLIKKGLS
NKFQKVNELIESLKNKDASNLLLTLIKKDIEPNLINVPNIPKDPYKKDIFQLNKEDKKTQQSEDLKSKIYSIKPTDLENP
KNRQQAIKDLNEFLKINPNDTYASKTLAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYASKT
LAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYAYKTLAQTYENNGDLLKAENVYEKIAKLTN
AQEDYYKLGIIRFKLKKYEHSIGSFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAVESFEKAIQIDKNYDTAYYQKGIAE
EKNGDMQQAFTSFKNAYNIDKKLNYALKAGIVSNNLGNFKKSEEYLSFFNDNAKKPNEIAIYNLSIAKFENNKLEESLEI
INKALNLNPEKSEYLYLKASINLKNENYQNAISLYSSVIEKNPENTSAYINLAKAYEKLGNKAQAISTLEKIINKNNKLA
LNNLGILYKKQKNYQKAIEIFEKAIKNSDIEAKYNLATTLIEINDNIRAKDLLKEYTKLKPNNPEALHALGIIEYNENNN
DQILRELVKKFPNYKKNENIRKIIGI

Sequences:

>Translated_906_residues
MNKKRTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLNEVKNSIIDRNYKKAYSVAKLLQDKYPKNEDIAMLTN
TLAEIANSSPFESNELQRDSANQILDKIKGQENAKTNINENFDIAFNNRYIKDSAITENYADRNDDIGIEDEDISEFKKS
KIPEKVNQNAKQKEEDQAIQSPNPKLNVNDQKNSFNLEKLKKKLSEKSNSENILKNPQNIENDKQSSNFSKEKNSEHILR
NPDNSKYSKNDNATFLKDVPLNSKKESDFSLPSQTIIGKIHRPYSYLIKKELYEILDDINTGRVALGKNRLKKLIKKGLS
NKFQKVNELIESLKNKDASNLLLTLIKKDIEPNLINVPNIPKDPYKKDIFQLNKEDKKTQQSEDLKSKIYSIKPTDLENP
KNRQQAIKDLNEFLKINPNDTYASKTLAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYASKT
LAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYAYKTLAQTYENNGDLLKAENVYEKIAKLTN
AQEDYYKLGIIRFKLKKYEHSIGSFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAVESFEKAIQIDKNYDTAYYQKGIAE
EKNGDMQQAFTSFKNAYNIDKKLNYALKAGIVSNNLGNFKKSEEYLSFFNDNAKKPNEIAIYNLSIAKFENNKLEESLEI
INKALNLNPEKSEYLYLKASINLKNENYQNAISLYSSVIEKNPENTSAYINLAKAYEKLGNKAQAISTLEKIINKNNKLA
LNNLGILYKKQKNYQKAIEIFEKAIKNSDIEAKYNLATTLIEINDNIRAKDLLKEYTKLKPNNPEALHALGIIEYNENNN
DQILRELVKKFPNYKKNENIRKIIGI
>Mature_906_residues
MNKKRTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLNEVKNSIIDRNYKKAYSVAKLLQDKYPKNEDIAMLTN
TLAEIANSSPFESNELQRDSANQILDKIKGQENAKTNINENFDIAFNNRYIKDSAITENYADRNDDIGIEDEDISEFKKS
KIPEKVNQNAKQKEEDQAIQSPNPKLNVNDQKNSFNLEKLKKKLSEKSNSENILKNPQNIENDKQSSNFSKEKNSEHILR
NPDNSKYSKNDNATFLKDVPLNSKKESDFSLPSQTIIGKIHRPYSYLIKKELYEILDDINTGRVALGKNRLKKLIKKGLS
NKFQKVNELIESLKNKDASNLLLTLIKKDIEPNLINVPNIPKDPYKKDIFQLNKEDKKTQQSEDLKSKIYSIKPTDLENP
KNRQQAIKDLNEFLKINPNDTYASKTLAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYASKT
LAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYAYKTLAQTYENNGDLLKAENVYEKIAKLTN
AQEDYYKLGIIRFKLKKYEHSIGSFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAVESFEKAIQIDKNYDTAYYQKGIAE
EKNGDMQQAFTSFKNAYNIDKKLNYALKAGIVSNNLGNFKKSEEYLSFFNDNAKKPNEIAIYNLSIAKFENNKLEESLEI
INKALNLNPEKSEYLYLKASINLKNENYQNAISLYSSVIEKNPENTSAYINLAKAYEKLGNKAQAISTLEKIINKNNKLA
LNNLGILYKKQKNYQKAIEIFEKAIKNSDIEAKYNLATTLIEINDNIRAKDLLKEYTKLKPNNPEALHALGIIEYNENNN
DQILRELVKKFPNYKKNENIRKIIGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=395, Percent_Identity=24.0506329113924, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI32307150, Length=395, Percent_Identity=24.0506329113924, Blast_Score=80, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104489; Mature: 104489

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLNEVKNSIIDRNYKKAYS
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH
VAKLLQDKYPKNEDIAMLTNTLAEIANSSPFESNELQRDSANQILDKIKGQENAKTNINE
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCC
NFDIAFNNRYIKDSAITENYADRNDDIGIEDEDISEFKKSKIPEKVNQNAKQKEEDQAIQ
CEEEEECCCEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
SPNPKLNVNDQKNSFNLEKLKKKLSEKSNSENILKNPQNIENDKQSSNFSKEKNSEHILR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCC
NPDNSKYSKNDNATFLKDVPLNSKKESDFSLPSQTIIGKIHRPYSYLIKKELYEILDDIN
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
TGRVALGKNRLKKLIKKGLSNKFQKVNELIESLKNKDASNLLLTLIKKDIEPNLINVPNI
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCC
PKDPYKKDIFQLNKEDKKTQQSEDLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPND
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCC
TYASKTLAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYASKT
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHH
LAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYAYKTLAQTYE
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHC
NNGDLLKAENVYEKIAKLTNAQEDYYKLGIIRFKLKKYEHSIGSFDQTIRLDPKHKKAHN
CCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCC
NKGIALMMLNKNKKAVESFEKAIQIDKNYDTAYYQKGIAEEKNGDMQQAFTSFKNAYNID
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
KKLNYALKAGIVSNNLGNFKKSEEYLSFFNDNAKKPNEIAIYNLSIAKFENNKLEESLEI
HHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHH
INKALNLNPEKSEYLYLKASINLKNENYQNAISLYSSVIEKNPENTSAYINLAKAYEKLG
HHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
NKAQAISTLEKIINKNNKLALNNLGILYKKQKNYQKAIEIFEKAIKNSDIEAKYNLATTL
CHHHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEHEEEE
IEINDNIRAKDLLKEYTKLKPNNPEALHALGIIEYNENNNDQILRELVKKFPNYKKNENI
EEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCH
RKIIGI
HHHHCC
>Mature Secondary Structure
MNKKRTNFSVLLLLIFLLILSFGGFGYYIYQSKLNDKNREIMLNEVKNSIIDRNYKKAYS
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH
VAKLLQDKYPKNEDIAMLTNTLAEIANSSPFESNELQRDSANQILDKIKGQENAKTNINE
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCC
NFDIAFNNRYIKDSAITENYADRNDDIGIEDEDISEFKKSKIPEKVNQNAKQKEEDQAIQ
CEEEEECCCEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
SPNPKLNVNDQKNSFNLEKLKKKLSEKSNSENILKNPQNIENDKQSSNFSKEKNSEHILR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCC
NPDNSKYSKNDNATFLKDVPLNSKKESDFSLPSQTIIGKIHRPYSYLIKKELYEILDDIN
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
TGRVALGKNRLKKLIKKGLSNKFQKVNELIESLKNKDASNLLLTLIKKDIEPNLINVPNI
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEECCCCC
PKDPYKKDIFQLNKEDKKTQQSEDLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPND
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCC
TYASKTLAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYASKT
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHH
LAQANKIQQSENLKSKIYSIKPTDLENPKNRQQAIKDLNEFLKINPNDTYAYKTLAQTYE
HHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHC
NNGDLLKAENVYEKIAKLTNAQEDYYKLGIIRFKLKKYEHSIGSFDQTIRLDPKHKKAHN
CCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCC
NKGIALMMLNKNKKAVESFEKAIQIDKNYDTAYYQKGIAEEKNGDMQQAFTSFKNAYNID
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
KKLNYALKAGIVSNNLGNFKKSEEYLSFFNDNAKKPNEIAIYNLSIAKFENNKLEESLEI
HHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHH
INKALNLNPEKSEYLYLKASINLKNENYQNAISLYSSVIEKNPENTSAYINLAKAYEKLG
HHHHHCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
NKAQAISTLEKIINKNNKLALNNLGILYKKQKNYQKAIEIFEKAIKNSDIEAKYNLATTL
CHHHHHHHHHHHHCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEHEEEE
IEINDNIRAKDLLKEYTKLKPNNPEALHALGIIEYNENNNDQILRELVKKFPNYKKNENI
EEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCH
RKIIGI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA