| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598470
Identifier: 51598470
GI number: 51598470
Start: 210902
End: 211657
Strand: Direct
Name: 51598470
Synonym: BG0211
Alternate gene names: NA
Gene position: 210902-211657 (Clockwise)
Preceding gene: 51598469
Following gene: 51598471
Centisome position: 23.32
GC content: 28.7
Gene sequence:
>756_bases ATGAAGATTTATTTATTATTAAATAAAAATTGTAAAATTTTTATTTTATTTTTAATTTTAATATTTAATTCAAAATTGGC ATATTCTCAAAGGCTAATTAGAATCGGCAAAGAAGAAATGAAAAACAAAAATTACATTCAAGCAATCGAAACACTAAGCG ATGCTATTAAAAAATATCCAAAAGTACAACTTGGATATTATTTTTTATCAATAGCATACAGAGAAAATAACCAGCTAACA GAAGCAGAAGGGGCTTTGCTCGATGGAATTGCAGTGGGGGGTGAGATTGATTACATATTATATTATGAATTAGGTAACAT AATGTTTAATAGAGGAGAGGGATACTATCCTCTAGCAATAAAATATTATTCTAATTCTATTAAAAGCAAACCCAATTATG ACAGCGCACTGCTAAACAGAGCTAATGCCTATGTTCAACAAGGCAAAATAACATCTAAAGAAAAAGAATACCAAAAGGCT TGGGACTCATATACTATGGCTATCCACGATTACTCGCAATTTATTACCCTTAGGTCAAAAACAGAAAAAAAAGACAGCAT TTTACTTATAATAAGCTATTTAAGAAATGAAAAAATTAACCTTGAAAAACTTGACAAAAGTTTAAAGGGGCGAACCGAGC ATATTGTATACGCAAAAGAAGATAAAAATCAAATACTTAAAGATAACCTAGAAACAAATTCTTTAATTGAGCTAGAAAAA CTTAATTGGCAAGAGGAGTTATACATAGATGAATAA
Upstream 100 bases:
>100_bases TTTCTTTTTTCAAAACAAAATTGAAGCAAAAAATAAATTTTAAAAAAGAGCTTATGAAATCTAAAGGCATTTAATCTAAA TTAAGTATAATGGGAAAAAA
Downstream 100 bases:
>100_bases AAAACGTACAAATTTTTCGGTATTATTGCTTTTAATTTTCTTACTTATTTTATCATTTGGAGGCTTTGGTTACTATATAT ATCAAAGCAAATTAAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKIYLLLNKNCKIFILFLILIFNSKLAYSQRLIRIGKEEMKNKNYIQAIETLSDAIKKYPKVQLGYYFLSIAYRENNQLT EAEGALLDGIAVGGEIDYILYYELGNIMFNRGEGYYPLAIKYYSNSIKSKPNYDSALLNRANAYVQQGKITSKEKEYQKA WDSYTMAIHDYSQFITLRSKTEKKDSILLIISYLRNEKINLEKLDKSLKGRTEHIVYAKEDKNQILKDNLETNSLIELEK LNWQEELYIDE
Sequences:
>Translated_251_residues MKIYLLLNKNCKIFILFLILIFNSKLAYSQRLIRIGKEEMKNKNYIQAIETLSDAIKKYPKVQLGYYFLSIAYRENNQLT EAEGALLDGIAVGGEIDYILYYELGNIMFNRGEGYYPLAIKYYSNSIKSKPNYDSALLNRANAYVQQGKITSKEKEYQKA WDSYTMAIHDYSQFITLRSKTEKKDSILLIISYLRNEKINLEKLDKSLKGRTEHIVYAKEDKNQILKDNLETNSLIELEK LNWQEELYIDE >Mature_251_residues MKIYLLLNKNCKIFILFLILIFNSKLAYSQRLIRIGKEEMKNKNYIQAIETLSDAIKKYPKVQLGYYFLSIAYRENNQLT EAEGALLDGIAVGGEIDYILYYELGNIMFNRGEGYYPLAIKYYSNSIKSKPNYDSALLNRANAYVQQGKITSKEKEYQKA WDSYTMAIHDYSQFITLRSKTEKKDSILLIISYLRNEKINLEKLDKSLKGRTEHIVYAKEDKNQILKDNLETNSLIELEK LNWQEELYIDE
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29462; Mature: 29462
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYLLLNKNCKIFILFLILIFNSKLAYSQRLIRIGKEEMKNKNYIQAIETLSDAIKKYP CEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCC KVQLGYYFLSIAYRENNQLTEAEGALLDGIAVGGEIDYILYYELGNIMFNRGEGYYPLAI CEEEEEEEEEEEEECCCCCCHHCCCEEEEEEECCCEEEEEEEEECCEEEECCCCEEEEEE KYYSNSIKSKPNYDSALLNRANAYVQQGKITSKEKEYQKAWDSYTMAIHDYSQFITLRSK EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEHHHHHEEECCC TEKKDSILLIISYLRNEKINLEKLDKSLKGRTEHIVYAKEDKNQILKDNLETNSLIELEK CCCCCCEEEEEEHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCCEEEHHH LNWQEELYIDE CCCCHHEEECC >Mature Secondary Structure MKIYLLLNKNCKIFILFLILIFNSKLAYSQRLIRIGKEEMKNKNYIQAIETLSDAIKKYP CEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCC KVQLGYYFLSIAYRENNQLTEAEGALLDGIAVGGEIDYILYYELGNIMFNRGEGYYPLAI CEEEEEEEEEEEEECCCCCCHHCCCEEEEEEECCCEEEEEEEEECCEEEECCCCEEEEEE KYYSNSIKSKPNYDSALLNRANAYVQQGKITSKEKEYQKAWDSYTMAIHDYSQFITLRSK EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEHHHHHEEECCC TEKKDSILLIISYLRNEKINLEKLDKSLKGRTEHIVYAKEDKNQILKDNLETNSLIELEK CCCCCCEEEEEEHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCCCEEEHHH LNWQEELYIDE CCCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA