Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is nagA [H]

Identifier: 51598411

GI number: 51598411

Start: 150550

End: 151755

Strand: Direct

Name: nagA [H]

Synonym: BG0149

Alternate gene names: 51598411

Gene position: 150550-151755 (Clockwise)

Preceding gene: 51598400

Following gene: 51598412

Centisome position: 16.65

GC content: 34.25

Gene sequence:

>1206_bases
ATGCCAAATTTTTGCTTATTCAACTCAAAATCCGTTTTAACTGGAAACGACAAACTAGATAATTCAGCGGTCCTTATTAA
AGATAATGAAATTTTTGATATTGTAACATCTGATAGACTTAAAAAAATGGATCTCAGGGAATATCAAATGATTGATGCAA
AATGCAACTATATAACTCCTGGACTTTACGACAGCCATATTCATGGATTTCACGGTTATGGGACAGACCAGTGCTCAACA
GAATCAATACTTAAAATGTCAGAGCATTTGGCACAATACGGTGTCGTAGGATTTTTACCAACTCTTTATCCAAGACCAAT
AGATGAAATGATTCAAACAATAAAAGCTTGTACAGCAGCAATTGGCAAGGAAAAGGGTGCTAAAATTTTAGGACTTCACC
TTGAAGGGCCATTTTTCTCCCCTGAAAAAAGAGGCGCACACCCTGTTTCTTATCTTCACGAACCGAGCATTAAAGTTATG
CAAAAACTAATAGATGCAGCTGGTGGAATATTTACAGGATCAAACGGCCAAAAAAAAACACATATAAGCACAATGACTGT
TGCTCCCGAGCTTAAAGGAATGAGAGAACTTGCAATGTTTTGCCTTGAAAACAATATAAACCTTCAAGCAGGACACACAA
ACGCAACATATGAAAATATGATCGAAGGATTTCAAGTTGGAATACTTCATACGACCCATTTTTTCAACGCAATGTCAAAA
CTTGACCACAGAAATCCAAATGCAATAGGAGCAGTATTAATACATGGTGATGTTTCTTGTGAAATTATTGCAGATGGTCA
TCATATACACCCAAAATTAGTTTTAATGATGAGAAAGCTTAAAGATATAAGTAAAATAGTCCTTGTAACTGACGGACTTA
CTCCAAATTTTCAAACTTCTGGAAAACTAATTGCAAACGGAGATGAAGTTTATATTGCAGAGGATGGCTTATTCCACAGT
GTGAAAAGCAACACAATAGCTGGATCAACGCTTACAATGATACAAGGTCTTAAAAATTTAGTAGAATTCGGCTACAGTTT
AAGTGATGCTGTTCAAGCAAGCTCTTACAATCCAACAAGAATTCTTAATATTGATAAAAAGGGATTAATATGCCATGGAT
ATGATGCAAACATCAATGTCTTAGATAAAGATTTCAATTTAAAATTAACAATGATAGAATCTAAAATAATTTTTAACAAT
CTCTAA

Upstream 100 bases:

>100_bases
CTTTAAGCATCAAAGAGCTTAAAAATAGAAAAATATAAAAAAGCAAAAACTTTAAAAAAGGTTAATGTTTATAGTAAAAT
AAATTAAAAGGAATATGAAA

Downstream 100 bases:

>100_bases
CTTTAACCCATTTTAAGGAGATCGCAATGAGATTAATAATCAGACCTACTTATGAAGACATATCGAAGTGGGCAGCCAAT
CACGTAGCACAAAAAATTAA

Product: N-acetylglucosamine-6-phosphate deacetylase

Products: NA

Alternate protein names: GlcNAc 6-P deacetylase [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPNFCLFNSKSVLTGNDKLDNSAVLIKDNEIFDIVTSDRLKKMDLREYQMIDAKCNYITPGLYDSHIHGFHGYGTDQCST
ESILKMSEHLAQYGVVGFLPTLYPRPIDEMIQTIKACTAAIGKEKGAKILGLHLEGPFFSPEKRGAHPVSYLHEPSIKVM
QKLIDAAGGIFTGSNGQKKTHISTMTVAPELKGMRELAMFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK
LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLVLMMRKLKDISKIVLVTDGLTPNFQTSGKLIANGDEVYIAEDGLFHS
VKSNTIAGSTLTMIQGLKNLVEFGYSLSDAVQASSYNPTRILNIDKKGLICHGYDANINVLDKDFNLKLTMIESKIIFNN
L

Sequences:

>Translated_401_residues
MPNFCLFNSKSVLTGNDKLDNSAVLIKDNEIFDIVTSDRLKKMDLREYQMIDAKCNYITPGLYDSHIHGFHGYGTDQCST
ESILKMSEHLAQYGVVGFLPTLYPRPIDEMIQTIKACTAAIGKEKGAKILGLHLEGPFFSPEKRGAHPVSYLHEPSIKVM
QKLIDAAGGIFTGSNGQKKTHISTMTVAPELKGMRELAMFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK
LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLVLMMRKLKDISKIVLVTDGLTPNFQTSGKLIANGDEVYIAEDGLFHS
VKSNTIAGSTLTMIQGLKNLVEFGYSLSDAVQASSYNPTRILNIDKKGLICHGYDANINVLDKDFNLKLTMIESKIIFNN
L
>Mature_400_residues
PNFCLFNSKSVLTGNDKLDNSAVLIKDNEIFDIVTSDRLKKMDLREYQMIDAKCNYITPGLYDSHIHGFHGYGTDQCSTE
SILKMSEHLAQYGVVGFLPTLYPRPIDEMIQTIKACTAAIGKEKGAKILGLHLEGPFFSPEKRGAHPVSYLHEPSIKVMQ
KLIDAAGGIFTGSNGQKKTHISTMTVAPELKGMRELAMFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSKL
DHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLVLMMRKLKDISKIVLVTDGLTPNFQTSGKLIANGDEVYIAEDGLFHSV
KSNTIAGSTLTMIQGLKNLVEFGYSLSDAVQASSYNPTRILNIDKKGLICHGYDANINVLDKDFNLKLTMIESKIIFNNL

Specific function: N-acetylglucosamine utilization. [C]

COG id: COG1820

COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nagA family [H]

Homologues:

Organism=Homo sapiens, GI21361513, Length=442, Percent_Identity=26.0180995475113, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI224922791, Length=440, Percent_Identity=26.1363636363636, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1786892, Length=387, Percent_Identity=28.9405684754522, Blast_Score=154, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17553768, Length=370, Percent_Identity=26.4864864864865, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI19920392, Length=364, Percent_Identity=29.6703296703297, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361140, Length=372, Percent_Identity=28.494623655914, Blast_Score=113, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR003764
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.1.25 [H]

Molecular weight: Translated: 44300; Mature: 44169

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNFCLFNSKSVLTGNDKLDNSAVLIKDNEIFDIVTSDRLKKMDLREYQMIDAKCNYITP
CCCEEEECCCEEEECCCCCCCCEEEEECCCEEEEECCCHHHHCCCHHHHEECCCCCEECC
GLYDSHIHGFHGYGTDQCSTESILKMSEHLAQYGVVGFLPTLYPRPIDEMIQTIKACTAA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHH
IGKEKGAKILGLHLEGPFFSPEKRGAHPVSYLHEPSIKVMQKLIDAAGGIFTGSNGQKKT
HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCCEE
HISTMTVAPELKGMRELAMFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK
EEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCHHEEEEEHHHHHHHHHHH
LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLVLMMRKLKDISKIVLVTDGLTPNFQTS
HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
GKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMIQGLKNLVEFGYSLSDAVQASSYNPTR
CEEEECCCEEEEECCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE
ILNIDKKGLICHGYDANINVLDKDFNLKLTMIESKIIFNNL
EEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEEEHCCCC
>Mature Secondary Structure 
PNFCLFNSKSVLTGNDKLDNSAVLIKDNEIFDIVTSDRLKKMDLREYQMIDAKCNYITP
CCEEEECCCEEEECCCCCCCCEEEEECCCEEEEECCCHHHHCCCHHHHEECCCCCEECC
GLYDSHIHGFHGYGTDQCSTESILKMSEHLAQYGVVGFLPTLYPRPIDEMIQTIKACTAA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHH
IGKEKGAKILGLHLEGPFFSPEKRGAHPVSYLHEPSIKVMQKLIDAAGGIFTGSNGQKKT
HCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEECCCCCCEE
HISTMTVAPELKGMRELAMFCLENNINLQAGHTNATYENMIEGFQVGILHTTHFFNAMSK
EEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCHHEEEEEHHHHHHHHHHH
LDHRNPNAIGAVLIHGDVSCEIIADGHHIHPKLVLMMRKLKDISKIVLVTDGLTPNFQTS
HCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
GKLIANGDEVYIAEDGLFHSVKSNTIAGSTLTMIQGLKNLVEFGYSLSDAVQASSYNPTR
CEEEECCCEEEEECCCCEEHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEE
ILNIDKKGLICHGYDANINVLDKDFNLKLTMIESKIIFNNL
EEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA