| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598398
Identifier: 51598398
GI number: 51598398
Start: 131119
End: 132246
Strand: Direct
Name: 51598398
Synonym: BG0136
Alternate gene names: NA
Gene position: 131119-132246 (Clockwise)
Preceding gene: 51598380
Following gene: 51598400
Centisome position: 14.5
GC content: 25.44
Gene sequence:
>1128_bases ATGAAACCTAATAAAATTATTAATAAGGCTATTTATCACTATAATTCAAAAAAATATTCACAAGCAATAAAGCTCCTAGA AAAAGAAATTTTTTTCTACAAAAACTACTATTTGTATCACTATGTCTTGGGAATGTCTTATCTTCGTATTGGAAACCTTG GCAATGCTCAAACATATCTTAAAAAAGCTTACACTTTAAACCCTGGCGAATCAAATATAAAACAAGCTATTGCTATACTT TTAGTAAGTCAAGGCAAAGAAGAAAAAGCTATTCAAATATGGCTTAAAATGATAGAAGAAAATCAAGAAGTAGATCGATC AGAGCTGTCTCTTGAAATTATTCGAAAAAACCCTGTTGAAGGATCTGTTTTTTTAAAAAACAACAACCTATATGAAAAAT TATTCCCAATAATTAAAGCAATACCAGATAAAAATTTAACAAAGCTAATCATAACAATTGCCATTGGAGGAATTGTATTT ATTCCAATATTAGCAATCTATTTTATTTTTTATGAACAAAAAATAACAACATCCATAAATCGAAAAGCAGAAATAAAAAA AAAATTAAACAATATTACTGCTTACATTGACGACATTAAAATAAATAACAAGGAAAAAATAAAAAATGAAGAAGGTCAAT TTATATTAATATTAACCAGCGATGAAATTAAAAATTCTTTCGAAAAAATCAAAATTTATTTAAAAACAGGAAAAGATAAT TTCGCAAGAGTAGAAATAAATAAAATATTAAATTCAAATGCATCGGAATCCATAAAACTAAAAGCCAAAAATCTTGCGAG TTTTATCTCAAGGCCAGATTTTATTAGCTTTAATGAATATCTAAACTTACAAGATATTAAAAAAGATCCATCAATCTATG CAAACGTATATGTAAAATGGGAAGGAGTAGTAAATAACGTCGAAAAAAAAGATAACATAATTCAGTTTGACTTTTATGTA GGATACAATAAAAACGTACTCTCAGGAATTATTCCAACAAAAACAACCTTTGATATTGATATTGATTTTAAAGACAATGT TGAAATACTTGGACAAATAGAATATAAAAAGAACAAACTTATCTTAAATGCAATCACAATTAGGAAAATAGATAAAAATG CAAATTAA
Upstream 100 bases:
>100_bases AAATTAGGGCAAAATAACAATATTCTATTTATTATTCTTTTAAAATAAAATCTTATATTATAATATTAAAAAGAAAATTG TGGGGTCAAATTCTAGCTAT
Downstream 100 bases:
>100_bases TCTTAATATCTTTGCCAAAATTTTTCAAGACAATCAACATTTAAGATTAAAAAGGAGTGCACAGTAGCTTTTCATTACAT TTGATAACATTGATTACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN
Sequences:
>Translated_375_residues MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN >Mature_375_residues MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYLKKAYTLNPGESNIKQAIAIL LVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVEGSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVF IPILAIYFIFYEQKITTSINRKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKWEGVVNNVEKKDNIIQFDFYV GYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKLILNAITIRKIDKNAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43502; Mature: 43502
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH KKAYTLNPGESNIKQAIAILLVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVE HHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCC GSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVFIPILAIYFIFYEQKITTSIN CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN HHHHHHHHHHHHEEEEEEEEECCHHHCCCCCCCEEEEEECHHHHCCCEEEEEEEEECCCC FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKW EEEEEEHHHHCCCCCCEEEEEHHHHHHHHCCCCEECHHHCCCHHHCCCCCCEEEEEEEEE EGVVNNVEKKDNIIQFDFYVGYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKL ECHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCEE ILNAITIRKIDKNAN EEEEEEEEEECCCCC >Mature Secondary Structure MKPNKIINKAIYHYNSKKYSQAIKLLEKEIFFYKNYYLYHYVLGMSYLRIGNLGNAQTYL CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH KKAYTLNPGESNIKQAIAILLVSQGKEEKAIQIWLKMIEENQEVDRSELSLEIIRKNPVE HHHEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCCC GSVFLKNNNLYEKLFPIIKAIPDKNLTKLIITIAIGGIVFIPILAIYFIFYEQKITTSIN CEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RKAEIKKKLNNITAYIDDIKINNKEKIKNEEGQFILILTSDEIKNSFEKIKIYLKTGKDN HHHHHHHHHHHHEEEEEEEEECCHHHCCCCCCCEEEEEECHHHHCCCEEEEEEEEECCCC FARVEINKILNSNASESIKLKAKNLASFISRPDFISFNEYLNLQDIKKDPSIYANVYVKW EEEEEEHHHHCCCCCCEEEEEHHHHHHHHCCCCEECHHHCCCHHHCCCCCCEEEEEEEEE EGVVNNVEKKDNIIQFDFYVGYNKNVLSGIIPTKTTFDIDIDFKDNVEILGQIEYKKNKL ECHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCEE ILNAITIRKIDKNAN EEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA