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The map label for this gene is lolC [H]

Identifier: 51598341

GI number: 51598341

Start: 76280

End: 77533

Strand: Direct

Name: lolC [H]

Synonym: BG0079

Alternate gene names: 51598341

Gene position: 76280-77533 (Clockwise)

Preceding gene: 51598340

Following gene: 51598344

Centisome position: 8.44

GC content: 22.57

Gene sequence:

>1254_bases
ATGATGCTTCTAAAGCTAACAGAAATTACAAAAATTGCGTATATAATTTTTAAAAATTCAACAAATAAAATAGCTTTAAT
AGGTTCTGGAATATCATTAAGTTTAGTAATGATCCCACTAATTATTGTCTACTATATGTCTAGCAATATTATGACTTCTA
CTATTAATAAATATATTGAAAGTGAAGGTTTTTCCATTCAAATAGAATACAATAACACAAATAAAACCAATTACTTAAAA
GACAGATTAAGCTCATTTAAAAAAAAATATAATTACAAAGATTTAAATTACTTTTTTGAGAAAAGAACTTACGGAATTAT
TGGAAATAATAAAAAACAAGGCGTATTAATAAGAGCAATAGAAAATGAATTCATATTGGAAAACAAATCAATAAAATTAA
TAAAAGGTACTAAAAATTTAAAAAAGGACTCCATACTCATTCCAAATCAAATAAAAAATAAACTTAATTTAAATCTCAAT
GAAAAAATTGATATTTTGATTCCAAATGCAAAAAACCATAAAATACTGCCCAGAATAAAAAAGTTTCATATCTCAGGAAT
AATTGAAACCGGACTAAAAGATATTGACAATAACTTAGTTTTAATTTCTCTTGAAAACGAAAATTTAATGTCAAAAAAGT
TTTCAAAAAGCATAATTGGAATTGAAACAAATTTCAATTCAATAAAAAACAATGAAATCTTGAAACAGAATTTAGAAACT
GAATTTCAAGAATTCCAAATAAAAACATTTTATGAACTTTACTTAAATAAATACAATAATCTAGATATAAGTAAAAAACT
TTTAATATTCATTATGGCTTTGATTATAATATTTGCAAGCATTAATATATCTTCGTCTATTTCAATGCTTATTTTTGAAA
ATAAAAAGAAAATTGCAATACTAAAATCAATTGGAATGAATAATTTAAACATAAAAATAATATTTCTTTTGATATCGCTC
ACATTAAGCACTACCTTTTGCGGGATTGGAATAATAATTGGGAACTATTTAACACTTAAAATATCTTATTTAATAAACTT
TGTTGATAATGTTTTAAACTTTTTTTTAAAAATATTTGGAGAAGAAAATTCTGAAATATTAAACTCAGAATATTACGTAT
CTGAATTTCAAATAGACTTAAGCCTGAGCTTTAGCTTAACACTTCTTAGCTTATATATGTTAATAAACATTTTAACTACA
CTGGTTCCGCTCAACATTGTCTCAAATCTAAAAGAAAAAGAAATCTTAAGATAG

Upstream 100 bases:

>100_bases
AAAATTTTAGAAAAACCTTAATACTAGTTAGTCATAACCCTCAATTTGCTAACAAAGCAGATTCAAAATATGAATTCAAA
GATAGGACATTAAAAAAACT

Downstream 100 bases:

>100_bases
CGCTTAAAGCCCTATTTAATCATTACATTATAAATTTTAATAGATGAAAAATCCTTTTCAATTGTAGGATAAATCTCATT
TAAGAAAATTGTACTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MMLLKLTEITKIAYIIFKNSTNKIALIGSGISLSLVMIPLIIVYYMSSNIMTSTINKYIESEGFSIQIEYNNTNKTNYLK
DRLSSFKKKYNYKDLNYFFEKRTYGIIGNNKKQGVLIRAIENEFILENKSIKLIKGTKNLKKDSILIPNQIKNKLNLNLN
EKIDILIPNAKNHKILPRIKKFHISGIIETGLKDIDNNLVLISLENENLMSKKFSKSIIGIETNFNSIKNNEILKQNLET
EFQEFQIKTFYELYLNKYNNLDISKKLLIFIMALIIIFASINISSSISMLIFENKKKIAILKSIGMNNLNIKIIFLLISL
TLSTTFCGIGIIIGNYLTLKISYLINFVDNVLNFFLKIFGEENSEILNSEYYVSEFQIDLSLSFSLTLLSLYMLINILTT
LVPLNIVSNLKEKEILR

Sequences:

>Translated_417_residues
MMLLKLTEITKIAYIIFKNSTNKIALIGSGISLSLVMIPLIIVYYMSSNIMTSTINKYIESEGFSIQIEYNNTNKTNYLK
DRLSSFKKKYNYKDLNYFFEKRTYGIIGNNKKQGVLIRAIENEFILENKSIKLIKGTKNLKKDSILIPNQIKNKLNLNLN
EKIDILIPNAKNHKILPRIKKFHISGIIETGLKDIDNNLVLISLENENLMSKKFSKSIIGIETNFNSIKNNEILKQNLET
EFQEFQIKTFYELYLNKYNNLDISKKLLIFIMALIIIFASINISSSISMLIFENKKKIAILKSIGMNNLNIKIIFLLISL
TLSTTFCGIGIIIGNYLTLKISYLINFVDNVLNFFLKIFGEENSEILNSEYYVSEFQIDLSLSFSLTLLSLYMLINILTT
LVPLNIVSNLKEKEILR
>Mature_417_residues
MMLLKLTEITKIAYIIFKNSTNKIALIGSGISLSLVMIPLIIVYYMSSNIMTSTINKYIESEGFSIQIEYNNTNKTNYLK
DRLSSFKKKYNYKDLNYFFEKRTYGIIGNNKKQGVLIRAIENEFILENKSIKLIKGTKNLKKDSILIPNQIKNKLNLNLN
EKIDILIPNAKNHKILPRIKKFHISGIIETGLKDIDNNLVLISLENENLMSKKFSKSIIGIETNFNSIKNNEILKQNLET
EFQEFQIKTFYELYLNKYNNLDISKKLLIFIMALIIIFASINISSSISMLIFENKKKIAILKSIGMNNLNIKIIFLLISL
TLSTTFCGIGIIIGNYLTLKISYLINFVDNVLNFFLKIFGEENSEILNSEYYVSEFQIDLSLSFSLTLLSLYMLINILTT
LVPLNIVSNLKEKEILR

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787362, Length=223, Percent_Identity=23.3183856502242, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838
- InterPro:   IPR011925 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 48047; Mature: 48047

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLKLTEITKIAYIIFKNSTNKIALIGSGISLSLVMIPLIIVYYMSSNIMTSTINKYIE
CEEEEEEHHEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SEGFSIQIEYNNTNKTNYLKDRLSSFKKKYNYKDLNYFFEKRTYGIIGNNKKQGVLIRAI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCCCCEEEEEE
ENEFILENKSIKLIKGTKNLKKDSILIPNQIKNKLNLNLNEKIDILIPNAKNHKILPRIK
CCCEEEECCCEEEEECCCCCCCCCEECCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
KFHISGIIETGLKDIDNNLVLISLENENLMSKKFSKSIIGIETNFNSIKNNEILKQNLET
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH
EFQEFQIKTFYELYLNKYNNLDISKKLLIFIMALIIIFASINISSSISMLIFENKKKIAI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEE
LKSIGMNNLNIKIIFLLISLTLSTTFCGIGIIIGNYLTLKISYLINFVDNVLNFFLKIFG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
EENSEILNSEYYVSEFQIDLSLSFSLTLLSLYMLINILTTLVPLNIVSNLKEKEILR
CCCCHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MMLLKLTEITKIAYIIFKNSTNKIALIGSGISLSLVMIPLIIVYYMSSNIMTSTINKYIE
CEEEEEEHHEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SEGFSIQIEYNNTNKTNYLKDRLSSFKKKYNYKDLNYFFEKRTYGIIGNNKKQGVLIRAI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCEEEEECCCCCCCEEEEEE
ENEFILENKSIKLIKGTKNLKKDSILIPNQIKNKLNLNLNEKIDILIPNAKNHKILPRIK
CCCEEEECCCEEEEECCCCCCCCCEECCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHH
KFHISGIIETGLKDIDNNLVLISLENENLMSKKFSKSIIGIETNFNSIKNNEILKQNLET
HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH
EFQEFQIKTFYELYLNKYNNLDISKKLLIFIMALIIIFASINISSSISMLIFENKKKIAI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEE
LKSIGMNNLNIKIIFLLISLTLSTTFCGIGIIIGNYLTLKISYLINFVDNVLNFFLKIFG
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
EENSEILNSEYYVSEFQIDLSLSFSLTLLSLYMLINILTTLVPLNIVSNLKEKEILR
CCCCHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]