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The map label for this gene is lolC [H]

Identifier: 51598339

GI number: 51598339

Start: 74348

End: 75601

Strand: Direct

Name: lolC [H]

Synonym: BG0077

Alternate gene names: 51598339

Gene position: 74348-75601 (Clockwise)

Preceding gene: 51598338

Following gene: 51598340

Centisome position: 8.22

GC content: 22.17

Gene sequence:

>1254_bases
ATGGGTATAAGAAATTTTTTGCTTAAAAAATTAATACTAGAAGAAAAAAATAGCTTAGCCCTCACAATTGTAATAATATT
AAGCATTACCTTAGGTGAAATAATAATTATCCTAACAATATCAATTATGAATGGTTTTCAAAACGATTTTTTCCTTAGCA
CTACAAATGTAGAAAGTGGAAATTTGAAAATAGAAAATGAACTTACTAAAGAAGAAATCAAAAAAATTAAAAAGATTGAG
GAAATAAAACATATAAATAAAATATACGAAACGCAAGGCATTGGAATTCAAGATTATTATTATCCAACTATTTTGCATAT
CATTGCAGTTGATATTAAAGATCTTAAAAAAGACCAAAATTTTATTACATTTACAGGACTTGAAAAAGATGAACTGGATC
TTAAAGACGATGAGATCATTATTGGAAATGTACTCTCCTACAATTTTAACTTATTAAAAAATGATACCTTAAGATTAATA
ATCGCCGATGAAATAAAAAACTTTATATCATTAGAAAATGATATAAAAAATTTTAAAATAAAATCAATTTTCAAAAGTAA
TTATGCAAAAATAAATGAAAATTTAATTTTTATGAATATAGACTATTTTATTAAAAATAATCTTTTACGTAATTCTAACA
TCAATTACCAAGTAAAAACAAAAAATTTAAATCCAAGTAACAAATTAATTGAAAAGATCAAAGCTATTAATCAAAAAATT
AAAGTAAAAACTTGGAATGAATACAATAAAGAATTTTATAAAGCATTGAAAATAGAACGAAATACAATGTTAATTATTTT
AACAAGCATTTTCATTGTTATTGCTGTTAATGCATATTATCTACAAAAAAGAATAATAATAAACAAAAATAAAGCTATTT
TAATACTATTATCCATGGGGCTTAGAATAAAAAAAATAAAACAAATTTTTTTTATTCACTCAATAATAATCTGCACTATA
GGGGGACTTCTTGGCTTGATACTGGGAATTTCAATTTCCTTAAATATAAATGAAATTTTAAAAATAATTGATAATCTAGT
AAACAGTTTAATAAATTTTTTAAATCAAATATTGGCTTTAGAAATAGATGGCATTAAAATACAAATAGTAAAAGATACAA
TTACTCCTAAATTATTTTTAAGCGATTTAGTATTTACTTTCTGCTTTGCATGCTTTTCTACAATATATTCAAGCATGAAA
GCAACAAAAAAAATTGGAAGTCAGAAAAACATTGAAACTATAAATGGGTCGTAA

Upstream 100 bases:

>100_bases
TGAATATGAAGAAGAAATATACTACAATAAAAAACCCGCTCTTAGAGTAAAGCATAAGAATGGAAAAATCATCGAAGAAA
AACCAATAGGAACAAATTAA

Downstream 100 bases:

>100_bases
TATGGAAAATATATTAATTATAAAAAATCTTTGCAAAGCATATAAAAAAAATAAAACAAAAATTCAAGTAATAGAAAATC
TAAACTTAACTGTAACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MGIRNFLLKKLILEEKNSLALTIVIILSITLGEIIIILTISIMNGFQNDFFLSTTNVESGNLKIENELTKEEIKKIKKIE
EIKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQNFITFTGLEKDELDLKDDEIIIGNVLSYNFNLLKNDTLRLI
IADEIKNFISLENDIKNFKIKSIFKSNYAKINENLIFMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKIKAINQKI
KVKTWNEYNKEFYKALKIERNTMLIILTSIFIVIAVNAYYLQKRIIINKNKAILILLSMGLRIKKIKQIFFIHSIIICTI
GGLLGLILGISISLNINEILKIIDNLVNSLINFLNQILALEIDGIKIQIVKDTITPKLFLSDLVFTFCFACFSTIYSSMK
ATKKIGSQKNIETINGS

Sequences:

>Translated_417_residues
MGIRNFLLKKLILEEKNSLALTIVIILSITLGEIIIILTISIMNGFQNDFFLSTTNVESGNLKIENELTKEEIKKIKKIE
EIKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQNFITFTGLEKDELDLKDDEIIIGNVLSYNFNLLKNDTLRLI
IADEIKNFISLENDIKNFKIKSIFKSNYAKINENLIFMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKIKAINQKI
KVKTWNEYNKEFYKALKIERNTMLIILTSIFIVIAVNAYYLQKRIIINKNKAILILLSMGLRIKKIKQIFFIHSIIICTI
GGLLGLILGISISLNINEILKIIDNLVNSLINFLNQILALEIDGIKIQIVKDTITPKLFLSDLVFTFCFACFSTIYSSMK
ATKKIGSQKNIETINGS
>Mature_416_residues
GIRNFLLKKLILEEKNSLALTIVIILSITLGEIIIILTISIMNGFQNDFFLSTTNVESGNLKIENELTKEEIKKIKKIEE
IKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQNFITFTGLEKDELDLKDDEIIIGNVLSYNFNLLKNDTLRLII
ADEIKNFISLENDIKNFKIKSIFKSNYAKINENLIFMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKIKAINQKIK
VKTWNEYNKEFYKALKIERNTMLIILTSIFIVIAVNAYYLQKRIIINKNKAILILLSMGLRIKKIKQIFFIHSIIICTIG
GLLGLILGISISLNINEILKIIDNLVNSLINFLNQILALEIDGIKIQIVKDTITPKLFLSDLVFTFCFACFSTIYSSMKA
TKKIGSQKNIETINGS

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838
- InterPro:   IPR011925 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 47973; Mature: 47842

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRNFLLKKLILEEKNSLALTIVIILSITLGEIIIILTISIMNGFQNDFFLSTTNVESG
CCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
NLKIENELTKEEIKKIKKIEEIKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQN
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
FITFTGLEKDELDLKDDEIIIGNVLSYNFNLLKNDTLRLIIADEIKNFISLENDIKNFKI
EEEEECCCCCCCCCCCCCEEEEEEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCHH
KSIFKSNYAKINENLIFMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKIKAINQKI
HHHHHHCHHEECCCEEEEEEHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEE
KVKTWNEYNKEFYKALKIERNTMLIILTSIFIVIAVNAYYLQKRIIINKNKAILILLSMG
EEEECHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECC
LRIKKIKQIFFIHSIIICTIGGLLGLILGISISLNINEILKIIDNLVNSLINFLNQILAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHEE
EIDGIKIQIVKDTITPKLFLSDLVFTFCFACFSTIYSSMKATKKIGSQKNIETINGS
EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure 
GIRNFLLKKLILEEKNSLALTIVIILSITLGEIIIILTISIMNGFQNDFFLSTTNVESG
CHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
NLKIENELTKEEIKKIKKIEEIKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQN
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
FITFTGLEKDELDLKDDEIIIGNVLSYNFNLLKNDTLRLIIADEIKNFISLENDIKNFKI
EEEEECCCCCCCCCCCCCEEEEEEEECCCEEEECCCEEEEEHHHHHHHHHHHHHHHCCHH
KSIFKSNYAKINENLIFMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKIKAINQKI
HHHHHHCHHEECCCEEEEEEHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCCEE
KVKTWNEYNKEFYKALKIERNTMLIILTSIFIVIAVNAYYLQKRIIINKNKAILILLSMG
EEEECHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECC
LRIKKIKQIFFIHSIIICTIGGLLGLILGISISLNINEILKIIDNLVNSLINFLNQILAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHEE
EIDGIKIQIVKDTITPKLFLSDLVFTFCFACFSTIYSSMKATKKIGSQKNIETINGS
EECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]