| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598274
Identifier: 51598274
GI number: 51598274
Start: 10431
End: 11270
Strand: Direct
Name: 51598274
Synonym: BG0011
Alternate gene names: NA
Gene position: 10431-11270 (Clockwise)
Preceding gene: 51598273
Following gene: 51598275
Centisome position: 1.15
GC content: 28.21
Gene sequence:
>840_bases ATGAAAAAAATATCTTATTTTACAAAAGAAAAAATTGAATGCCCTGTATGCTCTTTTAAATTTCAAAAAGAAGAGCTTTT GACTGGAAGTAGCAGATTAATAGCTGGTGAGTTGAAAATTGATCTAAAAAGAGAATATATAAAAAACAACAAATATGGCA ATATTTATCCTAGAATATATTCTATAACAGTATGTCCAAAATGCTACTTTGCAACATTTCCAAGCGAATTTAATTCAATC CCTAAAAACAAAAAAGAAATTTTGCAAAATAAAAAATCCGAAAGAAAAAAAATAAATGCTATTTTTGATGACATGATTAA CTTCAGCAAATCTAGAACATTAAAAGAGGGAGCTGCAAGTTACATTCTTGCTATGCTATGTTATGAACATCTTGAAAAGA ATCATAATCCCACTTTAAATCAAGCAAAATCAGCAATAAGAGCCGCTTGGACATTTGAAGACCTTGAAAAAGAAGAGCCG AACAAAAACTATAATTATCTTCAAAAAATATTTTATCACAAAGCTGCATATCTTTATAAACTAGTTATTGAAAAAGACAA AGACAATTCAGAACCTGTTAGCGCATCAACCATATTTGGTCCAGATACAGATAAAAATTATGGCTATGACAGTGTTCTCT ACTTATCAGGTCTTCTAGAATACTTTTATGGAAATAAGGATAATAAGGAATACAGATACAAACAATTAAACGATATAAAA ACCACTCTCTCTAAAATAGCAGGAATGGGCAAATCTTCAAAAGAAAAGCCTTCAATACTTTTAGATAAAATCAAAGAAGT ATACTTTAAAATATCAAAGGAAATGAAAAATCTTAAATAA
Upstream 100 bases:
>100_bases AATTGAAAAATTTGCAATTAAAATGAATTTAAAGATATACCTAACAATATCCCATGAAAAGGAGTACGCTATTGCATTTG TAATGGTAGAAAATTAATTC
Downstream 100 bases:
>100_bases ATGAAAAAAATATTAGCTGAAATCACTTATGACGGATCCATATACCATGGATTTCAAATACAACCAACAAAGCCTACTAT TCAAGGAGAAATCGAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKKISYFTKEKIECPVCSFKFQKEELLTGSSRLIAGELKIDLKREYIKNNKYGNIYPRIYSITVCPKCYFATFPSEFNSI PKNKKEILQNKKSERKKINAIFDDMINFSKSRTLKEGAASYILAMLCYEHLEKNHNPTLNQAKSAIRAAWTFEDLEKEEP NKNYNYLQKIFYHKAAYLYKLVIEKDKDNSEPVSASTIFGPDTDKNYGYDSVLYLSGLLEYFYGNKDNKEYRYKQLNDIK TTLSKIAGMGKSSKEKPSILLDKIKEVYFKISKEMKNLK
Sequences:
>Translated_279_residues MKKISYFTKEKIECPVCSFKFQKEELLTGSSRLIAGELKIDLKREYIKNNKYGNIYPRIYSITVCPKCYFATFPSEFNSI PKNKKEILQNKKSERKKINAIFDDMINFSKSRTLKEGAASYILAMLCYEHLEKNHNPTLNQAKSAIRAAWTFEDLEKEEP NKNYNYLQKIFYHKAAYLYKLVIEKDKDNSEPVSASTIFGPDTDKNYGYDSVLYLSGLLEYFYGNKDNKEYRYKQLNDIK TTLSKIAGMGKSSKEKPSILLDKIKEVYFKISKEMKNLK >Mature_279_residues MKKISYFTKEKIECPVCSFKFQKEELLTGSSRLIAGELKIDLKREYIKNNKYGNIYPRIYSITVCPKCYFATFPSEFNSI PKNKKEILQNKKSERKKINAIFDDMINFSKSRTLKEGAASYILAMLCYEHLEKNHNPTLNQAKSAIRAAWTFEDLEKEEP NKNYNYLQKIFYHKAAYLYKLVIEKDKDNSEPVSASTIFGPDTDKNYGYDSVLYLSGLLEYFYGNKDNKEYRYKQLNDIK TTLSKIAGMGKSSKEKPSILLDKIKEVYFKISKEMKNLK
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018708 [H]
Pfam domain/function: PF09986 DUF2225 [H]
EC number: NA
Molecular weight: Translated: 32612; Mature: 32612
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISYFTKEKIECPVCSFKFQKEELLTGSSRLIAGELKIDLKREYIKNNKYGNIYPRIY CCCCCHHHHHCCCCCHHCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEE SITVCPKCYFATFPSEFNSIPKNKKEILQNKKSERKKINAIFDDMINFSKSRTLKEGAAS EEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILAMLCYEHLEKNHNPTLNQAKSAIRAAWTFEDLEKEEPNKNYNYLQKIFYHKAAYLYK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVIEKDKDNSEPVSASTIFGPDTDKNYGYDSVLYLSGLLEYFYGNKDNKEYRYKQLNDIK HHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TTLSKIAGMGKSSKEKPSILLDKIKEVYFKISKEMKNLK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKISYFTKEKIECPVCSFKFQKEELLTGSSRLIAGELKIDLKREYIKNNKYGNIYPRIY CCCCCHHHHHCCCCCHHCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCEEE SITVCPKCYFATFPSEFNSIPKNKKEILQNKKSERKKINAIFDDMINFSKSRTLKEGAAS EEEECCHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YILAMLCYEHLEKNHNPTLNQAKSAIRAAWTFEDLEKEEPNKNYNYLQKIFYHKAAYLYK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LVIEKDKDNSEPVSASTIFGPDTDKNYGYDSVLYLSGLLEYFYGNKDNKEYRYKQLNDIK HHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH TTLSKIAGMGKSSKEKPSILLDKIKEVYFKISKEMKNLK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]