Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is femD

Identifier: 51598267

GI number: 51598267

Start: 3254

End: 5041

Strand: Direct

Name: femD

Synonym: BG0004

Alternate gene names: NA

Gene position: 3254-5041 (Clockwise)

Preceding gene: NA

Following gene: 51598271

Centisome position: 0.36

GC content: 27.46

Gene sequence:

>1788_bases
ATGCTTAAACAATATTCACTTAACATGAAGAATTTTAAAAAAGCTTTTGATGAGATGATATTTTCTGCTTCGGGATTTAG
AAAAATTTTTGCCAAATCAAAAGATGAAGATTCAACAGAAAATGAAATAGCCAATGAAGATAAAGTACTAATAGCACTAA
TATTCTTCACAATATCAAATTATTTTAAAATTGAATCCAGACCCTATATTGGATTAGGATTAGATTCAAGACCAACTGGT
AACATTATTGCAGAAATAACAATAAAAATATTAATAACAAGCAAAGAAAAGATTAAGTTTTTTGGCATACTTCCAATAAC
TGAAATTTTAGCTTGTACAAAAAACAGCAAAGATTCAAAAGGCTTCATTTATATCTCTGCAAGCCATAATCCAGCAGGTT
ACAATGGAATAAAAATAGGGTTAAACGATGGTGGCGTACTAAATTCTGCAAAAACTCAGGAAATAATAAAACAAATTAAA
AATAATAGCCAAAATGAAAATTTAATAAAGCATTTAATTAATACCCTGAACAAATTTGATGAAGATAAATCACATTTAGA
ATATTATAAAAAAACAATAAAATTAGAAAAAGAAAATAAAAACCAATCTTACGAAGTCTATAAATCATTAATACATGAAA
TAGCGTATGAAAACGATATTAACAATAAAAATATCGAAATTTTAAAGAAAAGAATACTAAAAAATCCAATTGGAATAATA
GCAGAAATGAATGGAAGCTCTAGAATCAATTCAATAGATAAAGAATTGATAGAATCTTTGGGATTGAAAATAGAATTACA
TAATGACAAAATGGGCATTTTTAAGCACAATATTATTCCTGAAGGAAAATCTTTAAATGAATGTAAAAAGCTACTACAAA
AAAAATATATAAAAGACAATTCTTTTGAGCTGGGCTATGTACCGGATTGTGATGGAGATAGAGGTAATCTGGTGTTTATA
GACAAAGTCACAAACACTCCAAGCATTATCGAAGCACAAAAAATATTTGCACTTGTAGTAATTTCAGAGCTTAGCTATCT
TTATTATACAGGAATAAAAAATAACATAGCAATAGTAACCAATGATGCAACATCTCTAAATATTGAAAAAATTGCAAATT
TTTTCAACGCCAAAGTTTATAGAGTAGAAGTTGGAGAAGCAAATCTAACAGAAATGGCAGATGATTTAAGAGCCCAGGGA
TTTACTGTAAAAATCTCAGGAGAGGGATCAAATGGGGGTTGCATAATATATCCTTCAAGAGTAAGAGACCCAATTACCAC
TCTGCTTAGTATCGTAAAATTATTAAAAATGAAAGAACTTTACCAAATATGGTGCAAATTGTCTAAAAACTACTATAAAG
AAAAATACAGCTTAAAAGATATTTTAAATACAACAAATTTTTATAGCAATGTAATAGTATCATCCAAGAAAGCCAATTTA
ACAAATCTCAAAATAGAAAACCAAGAAATTTTAAAAAGCAATTACGAAAATCTATTGATTAAAGAGATAAAAAGCAACAA
ATTATTTCAAGAATTATCAATAGTTGATTATGAAATCATTAACTACGAAGGCAAAATACAATCTAAGATTAGAACAGGAG
ATGCCTCGGGAGGATTAAAGGTATTATTAAAAACTAATAAAGAAATCGTTGCAACCTTATGGATGAGAATCTCAAAAACA
GAACCAGTAACAAGGGTGCTTAGCGAGGTTATTTATACAAAAAGAAATGCTTTGTTTAAGCTACTAGAATTTAATAAAAG
ATTAATAAAAAAGGCAAATCTACTATAA

Upstream 100 bases:

>100_bases
ATAAGCAAAAAAACAAATTTTCAAGTATAATGGTATAAGTGACATATTATTGATTATTATAGCAATAATATGACTAGAAT
ATCAATGAGAAGAAATTTAA

Downstream 100 bases:

>100_bases
TAATTAATATTGTTTGATTTAAATAATAAGTTGATCACAGCTATAAGTCTATCATAAAATTAATAATTTTCATTCTTCAT
TTTTTTATTTTTCAACACTA

Product: phosphoglucomutase

Products: alpha-D-glucose 6-phosphate

Alternate protein names: Phosphomannomutase; Phosphohexose Mutase Family Protein

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG
NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK
NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII
AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI
DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG
FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL
TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT
EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL

Sequences:

>Translated_595_residues
MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG
NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK
NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII
AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI
DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG
FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL
TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT
EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL
>Mature_595_residues
MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISNYFKIESRPYIGLGLDSRPTG
NIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSKGFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIK
NNSQNENLIKHLINTLNKFDEDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII
AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDNSFELGYVPDCDGDRGNLVFI
DKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVTNDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQG
FTVKISGEGSNGGCIIYPSRVRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL
TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLKVLLKTNKEIVATLWMRISKT
EPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL

Specific function: Unknown

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.2.2

Molecular weight: Translated: 67838; Mature: 67838

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISN
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCC
YFKIESRPYIGLGLDSRPTGNIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSK
CEEECCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCC
GFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIKNNSQNENLIKHLINTLNKFD
CEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
EDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE
AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDN
EECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCC
SFELGYVPDCDGDRGNLVFIDKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVT
CEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEE
NDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQGFTVKISGEGSNGGCIIYPSR
CCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCEEEECHH
VRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLK
EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHEECCCCCCCEE
VLLKTNKEIVATLWMRISKTEPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKQYSLNMKNFKKAFDEMIFSASGFRKIFAKSKDEDSTENEIANEDKVLIALIFFTISN
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCC
YFKIESRPYIGLGLDSRPTGNIIAEITIKILITSKEKIKFFGILPITEILACTKNSKDSK
CEEECCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHCCCCCCCC
GFIYISASHNPAGYNGIKIGLNDGGVLNSAKTQEIIKQIKNNSQNENLIKHLINTLNKFD
CEEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
EDKSHLEYYKKTIKLEKENKNQSYEVYKSLIHEIAYENDINNKNIEILKKRILKNPIGII
CCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE
AEMNGSSRINSIDKELIESLGLKIELHNDKMGIFKHNIIPEGKSLNECKKLLQKKYIKDN
EECCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCC
SFELGYVPDCDGDRGNLVFIDKVTNTPSIIEAQKIFALVVISELSYLYYTGIKNNIAIVT
CEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEE
NDATSLNIEKIANFFNAKVYRVEVGEANLTEMADDLRAQGFTVKISGEGSNGGCIIYPSR
CCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCCEEEECHH
VRDPITTLLSIVKLLKMKELYQIWCKLSKNYYKEKYSLKDILNTTNFYSNVIVSSKKANL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
TNLKIENQEILKSNYENLLIKEIKSNKLFQELSIVDYEIINYEGKIQSKIRTGDASGGLK
EEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHEECCCCCCCEE
VLLKTNKEIVATLWMRISKTEPVTRVLSEVIYTKRNALFKLLEFNKRLIKKANLL
EEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: alpha-D-glucose 1-phosphate

Specific reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA