| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51598207
Identifier: 51598207
GI number: 51598207
Start: 4682178
End: 4682654
Strand: Reverse
Name: 51598207
Synonym: YPTB3922
Alternate gene names: NA
Gene position: 4682654-4682178 (Counterclockwise)
Preceding gene: 51598208
Following gene: 51598199
Centisome position: 98.69
GC content: 40.46
Gene sequence:
>477_bases ATGACAAATCGAATGAAAGCTTTAATGTTAGTGACACATCTTGCCGTATTCGGTGCGGGAACAGGATTGGGGATTTATAT CTTGCCAATATTAACCGCAGAAACTAACGCGACAGCACCTGAGATACAAGCAGTAAAGCAATCTGCAAAATATACCGGTG AGTTTAGTCGCAACCAGAAAGGAAGTGATGCCGTACACTGGGCAGAAGGAAAACTGTATGTATCAGAACACGAAATTGCC TTTGAAGGAGAAATTGCACCAGGACCTGATTACAAAATCTATCTGACGAAAACACAGGCGGATGATAAAGAATCATTTCT TAAAATTAAGGATGATGCAAAATTAATTGGTGACTTGAAAAATTTTGGTAACTTCAAAAAGACGTTACCCGCAGGCGTCA ATCCGGACGATTACACAACCGTACAAATATGGTGCGAAACATTTTCTCAGTTTATTGGCTCTGCCAGCTACAAGTAG
Upstream 100 bases:
>100_bases CGCGCTGACTCATGATGAAAATACTGACTGACGGTCTGGGACCAAAGGAGTAAACACCCGGCCTAAGAGGTTAAGTAAGA TTATCCGAGAGCTATTTTTT
Downstream 100 bases:
>100_bases TGAACATCAGGTAGCTTTTGAGTTTCATGAGTTCGCTGCTTTTACGGTCGTATTGTATTAACGAAGGCAAAACCGTTATT ACACTTAAGGGAGAGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Electron Transfer DM
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTNRMKALMLVTHLAVFGAGTGLGIYILPILTAETNATAPEIQAVKQSAKYTGEFSRNQKGSDAVHWAEGKLYVSEHEIA FEGEIAPGPDYKIYLTKTQADDKESFLKIKDDAKLIGDLKNFGNFKKTLPAGVNPDDYTTVQIWCETFSQFIGSASYK
Sequences:
>Translated_158_residues MTNRMKALMLVTHLAVFGAGTGLGIYILPILTAETNATAPEIQAVKQSAKYTGEFSRNQKGSDAVHWAEGKLYVSEHEIA FEGEIAPGPDYKIYLTKTQADDKESFLKIKDDAKLIGDLKNFGNFKKTLPAGVNPDDYTTVQIWCETFSQFIGSASYK >Mature_157_residues TNRMKALMLVTHLAVFGAGTGLGIYILPILTAETNATAPEIQAVKQSAKYTGEFSRNQKGSDAVHWAEGKLYVSEHEIAF EGEIAPGPDYKIYLTKTQADDKESFLKIKDDAKLIGDLKNFGNFKKTLPAGVNPDDYTTVQIWCETFSQFIGSASYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17403; Mature: 17272
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRMKALMLVTHLAVFGAGTGLGIYILPILTAETNATAPEIQAVKQSAKYTGEFSRNQK CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC GSDAVHWAEGKLYVSEHEIAFEGEIAPGPDYKIYLTKTQADDKESFLKIKDDAKLIGDLK CCCCEEEECCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCHHEEEECCHHHHHHHHH NFGNFKKTLPAGVNPDDYTTVQIWCETFSQFIGSASYK HCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCC >Mature Secondary Structure TNRMKALMLVTHLAVFGAGTGLGIYILPILTAETNATAPEIQAVKQSAKYTGEFSRNQK CCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC GSDAVHWAEGKLYVSEHEIAFEGEIAPGPDYKIYLTKTQADDKESFLKIKDDAKLIGDLK CCCCEEEECCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCHHEEEECCHHHHHHHHH NFGNFKKTLPAGVNPDDYTTVQIWCETFSQFIGSASYK HCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA