Click here to switch to the map view.

The map label for this gene is yqiG

Identifier: 51598180

GI number: 51598180

Start: 4648616

End: 4651114

Strand: Reverse

Name: yqiG

Synonym: YPTB3895

Alternate gene names: 51598180

Gene position: 4651114-4648616 (Counterclockwise)

Preceding gene: 51598181

Following gene: 51598179

Centisome position: 98.03

GC content: 45.82

Gene sequence:

>2499_bases
ATGCCATATAATTCTAAAAGAAAAAAAACCATCTTCCTAATGGTGAAAGTATTAACAATAATTTTAGTATGGTTATTTTT
GCCTGAATCGACTGCAGTAGTAAAATTCAATACCAATATTATCGATGCTAAAGACCGTAGTAATATCGATCTCTCTCGTT
TTGAGGTTGATGATTACACCCCTCCGGGGAATTATCTACTTGATATTCTTATTGATGATAGGCTGTTACCTGAACGTTAT
TTAGTGACTTATCTCGCTGTTGATGAAGGGAAATCAACGAAGCTCTGTTTGACGCCTGACTTAGTTAATCTATTTGGTTT
ATCTACGGAAGTACGTGAGTCGATGACATTATGGAATAACGACAAGTGTGTTGCTATTGATGAAAAAAAAGAGATAAAAA
TTCAGTACGATAAAGAGAAGCAATCCTTAATTATTTCTATTCCCCAAGCTTGGCTGGCTTATAACGATCCCAATTGGGTG
CCGCCTTCACAATGGGGAAACGGTGTTGCTGGTACTTTATTGGATTACAATTTGTTTGGTTATCATTATTCACCGAATAT
GGGCGGCAGTACCACAAATTTCAGCAGCTACGGCACTACCGGGGCTAATATGGGACCATGGCGTATTCGTGCAGATTACC
AATATATCAATACAGAAACGGCGGGCGAGCACTACCGTAATTTTGATTGGTCGCAAGTGTATGCTTTTCGAGCCATCCCC
TCGATAGGGGCTAAATTTGTCGGTGGCCAGACTTATCTCAACTCCAGTATTTTTGATTCATTCCGTTTTCTGGGCACTTC
ACTTTCCAGTGATGAGCGCATGTTGCCACCGACGTTACGCGGCTATGCACCACAGGTAATGGGCATTGCTCACACCAACG
CCCGCGTGGTATTGAGCCAGAATGGGCGGGTGCTTTATCAGACTAACGTTGCACCAGGCCCCTTTGTTATTCAAGACATT
AGCGAAGCCGTACAAGGGAATATTGATGTCCGCGTGGAAGAGGAAGATGGCCGGGTCACCGTGTTTCAAGTCAACGCCGC
GAGCGTGCCATTTTTAACCCGTAAAGGTGCCGTGCGCTATAAAACTGCGTTGGGTCGCCCGATGCTGGGGGGAAATAATT
CAGCCAGTAATCCGACATTCTTTAGTGGCGAATTCTCGTGGGGCGCATTTAACCATGTTTCATTATACGGTGGGCTGATG
ACGACTTCGCAGGATTACACCTCGGCTGCGTTGGGCATCGGGCAAAATTTATATGACTTCGGCGCACTGTCTATTGATAT
CACCCATTCCCGTGCGCAGTTACCAAATGAAGAACAGCAGAACGGGGAAAGCTATCGCGTTAATTATTCCAAACGTTTTG
AGCAGACTGACAGCCAGATTAGCTTTGCCGGATACCGTTTCTCGAAGAAGAATTTTATGAGTATGAGCCAGTATTTGGAT
TGGCTAAACGGCAATACTGCTCTGCAATATGACAAGCAGGCTTATACCGTGGCAGCTAACCAGTATCTGGCCTGGCCGGA
TATCACGATGTATTTATCGGTGACACGTAGAACCTATTGGAATGCGGCCTCCAGTAACAACTACAGTCTATCCATGAGCA
AGATTTTTGATATCGGTACTTTTAAGGGTATTTCGGCGACGATATCCGCTAATAAGGTGAATAATCAGTATGCCAATGAG
AATCAAATGTTCTTCTCACTCAGCGTACCGATCGGCATAGGCCAGCAGGCCAGCTATGATGCACAGCGAGGCCGCAATAC
CGGCTACACGCAAAATATCTCCTATTTCAACAACCAGAATCCGAAAAATATTTGGCGTATCAGCGCGGGTGGCGGTAACC
CAGAACTGCAAAAAGGTAATGGTGTGTTCCGTGGTGGTTATCAACATAGCTCGCCTTATGGTGAATTTGGTCTTGATGGT
AGCCATAAAAATAATGAGTACAACTCAATCAATACCAACTGGTATGGCTCAATTACGGCAACCGCTTATGGGGTTGCTGC
CCACCAGAATAAAGCGGGCAATGAACCAAGAATAATGGTTGATACCGGGGATGTCGCAGGGGTGTCGCTGAATAATAACT
CGGCAGTGACGAACCGTTTTGGTGTGGCGGTGGTCAGTGGCGCAACCAGCTACCAACAGTCTGATATTCGGGTGGATGTG
CAGAATCTGCCGGATGATATTGAGGTCTACAACACCGTTATCCAAAAAACGCTGACCGAAGGGGCAATTGGTTACCGTGA
GATAAGGGCGGTAAAAGGTCGGCAAATGATGGCGATTATTCGCCTGAAAGATGGCAGTTCCCCCCCCTTGGGGGCATCCG
TTATCACGGACAAAACGGGCGCTGAAGTTGGAATTGTGGGAGACGATGGCCTGACGTATTTGGCGGGATTACAAGACACT
GAGAGGCTGACTGTTCAATGGGGGAAAAAACAGTGCACGCTCATATTGCCAAAAGATAAAGGAATGAACTCAGGAAAGGT
ACTACTGCCCTGCCAGTAA

Upstream 100 bases:

>100_bases
AACCTATGCTCTGAATTATAAATAACAAATGTTTAAAGTAATTAAAGGGGAGGTAACTCCCCTCTAATTAATATTATCGC
CATAAGACAATGGTTTATAT

Downstream 100 bases:

>100_bases
GTGTTTTTGGGGAAAAATATTCATTAAAACGGTTGTTGATCGAAACTGAGTTATTCACAGCCAAATGCGGCCTTTTACAG
TGGAATAGCGAAATGAAAGA

Product: outer membrane fimbrial usher porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 832; Mature: 831

Protein sequence:

>832_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKTALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLM
TTSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANE
NQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDG
SHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDT
ERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Sequences:

>Translated_832_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKTALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLM
TTSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANE
NQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDG
SHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDT
ERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
>Mature_831_residues
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERYL
VTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVP
PSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIPS
IGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDIS
EAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKTALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMT
TSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDW
LNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANEN
QMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGS
HKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQ
NLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTE
RLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=816, Percent_Identity=40.0735294117647, Blast_Score=620, Evalue=1e-178,
Organism=Escherichia coli, GI1786332, Length=843, Percent_Identity=27.1648873072361, Blast_Score=303, Evalue=2e-83,
Organism=Escherichia coli, GI1790772, Length=870, Percent_Identity=26.7816091954023, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787172, Length=803, Percent_Identity=26.8991282689913, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1786744, Length=841, Percent_Identity=27.2294887039239, Blast_Score=262, Evalue=6e-71,
Organism=Escherichia coli, GI1789533, Length=795, Percent_Identity=27.6729559748428, Blast_Score=239, Evalue=5e-64,
Organism=Escherichia coli, GI1788427, Length=860, Percent_Identity=24.7674418604651, Blast_Score=209, Evalue=8e-55,
Organism=Escherichia coli, GI1789610, Length=724, Percent_Identity=22.3756906077348, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92297; Mature: 92166

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEEECHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEECCCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KTALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDF
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHC
GALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
CEEEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGT
HHCCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCC
FKGISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQN
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCC
PKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITA
CCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
EEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEC
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCC
AEVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
CEEEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure 
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEEECHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEECCCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KTALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDF
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHC
GALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
CEEEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGT
HHCCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCC
FKGISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQN
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCC
PKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITA
CCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
EEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEC
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCC
AEVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
CEEEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]