| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is malP [H]
Identifier: 51598065
GI number: 51598065
Start: 4480263
End: 4482668
Strand: Reverse
Name: malP [H]
Synonym: YPTB3775
Alternate gene names: 51598065
Gene position: 4482668-4480263 (Counterclockwise)
Preceding gene: 51598070
Following gene: 51598064
Centisome position: 94.48
GC content: 49.58
Gene sequence:
>2406_bases ATGTCACAGCCTATGCTTAAAAAGGACGATTTTCTGGCCGCCCTGACTCGCCAGTGGCAGCGCTTTGGCTTAACCTCCGC TCAGCAAATGACCCCGTATCAATGGTGGGAAGCTGTCAGCGCTGCGTTAGCCGAACAGTTATCTGCTCAGCCCGCACCGA GCAAACCAAAAAATGTACAACGCCATGTCAACTACATTTCGATGGAGTTTTTAATTGGTCGTTTGACAGCTAATAACCTA ATTAATCTGGGTTGGTATGACACGGTGGACGCGCTGTTAGCGGAGCAGCAGGTTAAGCTGAGTGATTTGTTAGAGCAAGA AACGGACCCAGCATTGGGCAACGGGGGCTTAGGGCGTTTGGCGGCTTGTTTTCTTGACTCAATGGCAACCGTTGAGCAAC CGGCAACGGGCTATGGGCTGAATTATCAATATGGCCTGTTCCGCCAGTCTTTCCGTGAATGTAAACAGCAAGAAGCGCCG GATAATTGGCAGCGGGAGAGTTACCCGTGGTTTCGCCACAATGCGGCATTGGCCGTTGATGTGGGGTTTGGCGGTAATCT GGTCAAGCAAGCCGATGGCCGCCAATTATGGCGTCCGGCCTTTACCTTGCGCGGTGAAGCGTGGGATTTACCGGTGTTGG GTTTCCGTAACGGCGTGACACAACCGCTACGTTTGTGGCAGGCGACGCACCAGCATCCGTTTGATTTAACCCTTTTTAAC GATGGCAAATTCTTGCTGGCGGAACAAAATGGTGTTGAAGCAGAAAAACTGACCAAAGTACTGTACCCGAATGATAACCA TCTGGCCGGCAAACGCCTGCGCCTGATGCAGCAATATTTCCAGTGTGCCTGTTCGGTCGCCGATATTTTGCGGAAGCACC ATTTGGCGGGCCGTAAACTGGCTGAACTGCCGGACTATGAAGTTATTCAGCTCAACGATACCCACCCAACAATCGCTATC CCGGAAATGCTGCGGGTCCTGCTGGATGAGCATCAACTCAGTTGGGATGCCGCTTGGGCGATTACCAGCAAAACATTCGC TTATACCAATCATACGTTGATGCCAGAAGCCCTTGAATGCTGGGATGAAAAACTGGTACGCAGTTTGTTGCCACGCCATT TTGTCATCATCAAGCAGATCAATGCGCAGTTTAAAAAGCTGGTGAACAAACAGTGGCCAGGCAATGACGAGGTGTGGGCC AAACTGGCGGTACATCATAATAAACAGGTGCGGATGGCGAATCTGTGTGTGGTCAGCGGCTTTGCTGTCAACGGCGTCGC CCAGTTGCATTCGGATCTCATTATCAAAGATCTGTTCCCTGAGTATTACCAATTGTGGCCAAATAAATTCCACAATGTAA CGAATGGTATTACGCCGCGCCGTTGGTTGAAACAATGTAACCCGGCACTCTCTGGTTTGATTGATGACACCTTGAAGGTG GAATGGGCCAACGATCTGGATGTTTTGCAAGACTTGGAACCCTACGCTGAGGATCCGGCTTTCCGTCAGCGTTATCAGCA GATTAAGTATGATAACAAGGTTAAATTAGCGCATTACGTCAAGCGCGTTATGGGGCTGGTTATCAATCCCGACGCTATTT TTGACGTACAGATTAAACGGCTACATGAATATAAACGTCAGCATTTGAATTTGTTGCATATCTTGTCGTTGTATCGCCAG ATCCGTGACAACCCGGCACTGGATATCGCACCACGGGTGTTCCTGTTTGGTGCCAAAGCTGCACCAGGCTATTATTTAGC CAAGAATATTATTTATGCGATTAATCAGGTTGCCGACAAGATCAACAATGATCCGATCGTTAAAGATCGTCTGAAAGTGG TGTTTATCCCCGACTATCGTGTTTCTGTCGCCGAATTGATGATCCCCGCAGCAGATGTATCTGAACAGATATCCACAGCA GGCAAAGAAGCCTCGGGTACCGGCAACATGAAAATGGCGCTAAATGGGGCGTTGACGGTCGGGACGCTGGACGGTGCTAA CGTTGAAATCGCCGAGCAAGTGGGCGATGAGAATATCTTTATCTTTGGTCACACGGTTGATCAAGTGAAAGCCATTCTGG CGAAGGGGTATCAGCCAAAGAAATACGTGAAAGCAGACCCACATCTGAAAAGTATTCTGGATGAATTGGCCAGTGGTGCG TTCAGTCAGGGTGATAAGCAGGCATTCGACATGATGTTGCACAGCTTATTAGAGGGGGGCGACCCTTATCTGGTATTGGC TGACTTTGCCTCCTACTGCCAGGCGCAGAAACAAATTGATGCGCTGTACCGTGATAAGGATGAGTGGACCCGCCGTGCCA TTCTTAACACCGCCCGAGTCGGGATGTTCAGCTCTGACCGTTCTATTCGCGATTATCAACAGCGAATTTGGCAAGCCAAA CGTTAA
Upstream 100 bases:
>100_bases GGCTCCTCCCCAGCTAATCCCTCATCGGGATGATGCTCTTGCCAGTACTCATTGGCAGGATACGGGTAAAATTACCCATT CACAGGATAGAGACCTCCCT
Downstream 100 bases:
>100_bases GGAGAAGACTGCATGGATCGTAAATCGCTCGATCAAGCAGCAACACTGGCAGGGATAGCTGCCAGTTACATTAATGCGCA TGGTAAACCGCAGGCGACGT
Product: maltodextrin phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MSQPMLKKDDFLAALTRQWQRFGLTSAQQMTPYQWWEAVSAALAEQLSAQPAPSKPKNVQRHVNYISMEFLIGRLTANNL INLGWYDTVDALLAEQQVKLSDLLEQETDPALGNGGLGRLAACFLDSMATVEQPATGYGLNYQYGLFRQSFRECKQQEAP DNWQRESYPWFRHNAALAVDVGFGGNLVKQADGRQLWRPAFTLRGEAWDLPVLGFRNGVTQPLRLWQATHQHPFDLTLFN DGKFLLAEQNGVEAEKLTKVLYPNDNHLAGKRLRLMQQYFQCACSVADILRKHHLAGRKLAELPDYEVIQLNDTHPTIAI PEMLRVLLDEHQLSWDAAWAITSKTFAYTNHTLMPEALECWDEKLVRSLLPRHFVIIKQINAQFKKLVNKQWPGNDEVWA KLAVHHNKQVRMANLCVVSGFAVNGVAQLHSDLIIKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALSGLIDDTLKV EWANDLDVLQDLEPYAEDPAFRQRYQQIKYDNKVKLAHYVKRVMGLVINPDAIFDVQIKRLHEYKRQHLNLLHILSLYRQ IRDNPALDIAPRVFLFGAKAAPGYYLAKNIIYAINQVADKINNDPIVKDRLKVVFIPDYRVSVAELMIPAADVSEQISTA GKEASGTGNMKMALNGALTVGTLDGANVEIAEQVGDENIFIFGHTVDQVKAILAKGYQPKKYVKADPHLKSILDELASGA FSQGDKQAFDMMLHSLLEGGDPYLVLADFASYCQAQKQIDALYRDKDEWTRRAILNTARVGMFSSDRSIRDYQQRIWQAK R
Sequences:
>Translated_801_residues MSQPMLKKDDFLAALTRQWQRFGLTSAQQMTPYQWWEAVSAALAEQLSAQPAPSKPKNVQRHVNYISMEFLIGRLTANNL INLGWYDTVDALLAEQQVKLSDLLEQETDPALGNGGLGRLAACFLDSMATVEQPATGYGLNYQYGLFRQSFRECKQQEAP DNWQRESYPWFRHNAALAVDVGFGGNLVKQADGRQLWRPAFTLRGEAWDLPVLGFRNGVTQPLRLWQATHQHPFDLTLFN DGKFLLAEQNGVEAEKLTKVLYPNDNHLAGKRLRLMQQYFQCACSVADILRKHHLAGRKLAELPDYEVIQLNDTHPTIAI PEMLRVLLDEHQLSWDAAWAITSKTFAYTNHTLMPEALECWDEKLVRSLLPRHFVIIKQINAQFKKLVNKQWPGNDEVWA KLAVHHNKQVRMANLCVVSGFAVNGVAQLHSDLIIKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALSGLIDDTLKV EWANDLDVLQDLEPYAEDPAFRQRYQQIKYDNKVKLAHYVKRVMGLVINPDAIFDVQIKRLHEYKRQHLNLLHILSLYRQ IRDNPALDIAPRVFLFGAKAAPGYYLAKNIIYAINQVADKINNDPIVKDRLKVVFIPDYRVSVAELMIPAADVSEQISTA GKEASGTGNMKMALNGALTVGTLDGANVEIAEQVGDENIFIFGHTVDQVKAILAKGYQPKKYVKADPHLKSILDELASGA FSQGDKQAFDMMLHSLLEGGDPYLVLADFASYCQAQKQIDALYRDKDEWTRRAILNTARVGMFSSDRSIRDYQQRIWQAK R >Mature_800_residues SQPMLKKDDFLAALTRQWQRFGLTSAQQMTPYQWWEAVSAALAEQLSAQPAPSKPKNVQRHVNYISMEFLIGRLTANNLI NLGWYDTVDALLAEQQVKLSDLLEQETDPALGNGGLGRLAACFLDSMATVEQPATGYGLNYQYGLFRQSFRECKQQEAPD NWQRESYPWFRHNAALAVDVGFGGNLVKQADGRQLWRPAFTLRGEAWDLPVLGFRNGVTQPLRLWQATHQHPFDLTLFND GKFLLAEQNGVEAEKLTKVLYPNDNHLAGKRLRLMQQYFQCACSVADILRKHHLAGRKLAELPDYEVIQLNDTHPTIAIP EMLRVLLDEHQLSWDAAWAITSKTFAYTNHTLMPEALECWDEKLVRSLLPRHFVIIKQINAQFKKLVNKQWPGNDEVWAK LAVHHNKQVRMANLCVVSGFAVNGVAQLHSDLIIKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALSGLIDDTLKVE WANDLDVLQDLEPYAEDPAFRQRYQQIKYDNKVKLAHYVKRVMGLVINPDAIFDVQIKRLHEYKRQHLNLLHILSLYRQI RDNPALDIAPRVFLFGAKAAPGYYLAKNIIYAINQVADKINNDPIVKDRLKVVFIPDYRVSVAELMIPAADVSEQISTAG KEASGTGNMKMALNGALTVGTLDGANVEIAEQVGDENIFIFGHTVDQVKAILAKGYQPKKYVKADPHLKSILDELASGAF SQGDKQAFDMMLHSLLEGGDPYLVLADFASYCQAQKQIDALYRDKDEWTRRAILNTARVGMFSSDRSIRDYQQRIWQAKR
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=748, Percent_Identity=43.716577540107, Blast_Score=632, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=781, Percent_Identity=43.2778489116517, Blast_Score=630, Evalue=1e-180, Organism=Homo sapiens, GI71037379, Length=751, Percent_Identity=43.8082556591212, Blast_Score=623, Evalue=1e-178, Organism=Homo sapiens, GI255653002, Length=691, Percent_Identity=43.849493487699, Blast_Score=607, Evalue=1e-173, Organism=Homo sapiens, GI257900462, Length=653, Percent_Identity=43.7978560490046, Blast_Score=578, Evalue=1e-165, Organism=Escherichia coli, GI48994936, Length=802, Percent_Identity=75.4364089775561, Blast_Score=1257, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=743, Percent_Identity=46.164199192463, Blast_Score=687, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=751, Percent_Identity=46.6045272969374, Blast_Score=698, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=751, Percent_Identity=46.6045272969374, Blast_Score=697, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=42.4167694204686, Blast_Score=587, Evalue=1e-168, Organism=Drosophila melanogaster, GI78706832, Length=748, Percent_Identity=45.7219251336898, Blast_Score=664, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=748, Percent_Identity=45.7219251336898, Blast_Score=664, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 91180; Mature: 91049
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPMLKKDDFLAALTRQWQRFGLTSAQQMTPYQWWEAVSAALAEQLSAQPAPSKPKNVQ CCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RHVNYISMEFLIGRLTANNLINLGWYDTVDALLAEQQVKLSDLLEQETDPALGNGGLGRL HHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AACFLDSMATVEQPATGYGLNYQYGLFRQSFRECKQQEAPDNWQRESYPWFRHNAALAVD HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEE VGFGGNLVKQADGRQLWRPAFTLRGEAWDLPVLGFRNGVTQPLRLWQATHQHPFDLTLFN ECCCCCHHCCCCCCHHHCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC DGKFLLAEQNGVEAEKLTKVLYPNDNHLAGKRLRLMQQYFQCACSVADILRKHHLAGRKL CCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AELPDYEVIQLNDTHPTIAIPEMLRVLLDEHQLSWDAAWAITSKTFAYTNHTLMPEALEC HCCCCCEEEEECCCCCCEEHHHHHHHHHHHHCCCCHHHEEEECCEEEECCCCCCHHHHHH WDEKLVRSLLPRHFVIIKQINAQFKKLVNKQWPGNDEVWAKLAVHHNKQVRMANLCVVSG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHEEEEEC FAVNGVAQLHSDLIIKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALSGLIDDTLKV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCHHHHHHHCCCEEE EWANDLDVLQDLEPYAEDPAFRQRYQQIKYDNKVKLAHYVKRVMGLVINPDAIFDVQIKR EECCCHHHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCEEHHHHHH LHEYKRQHLNLLHILSLYRQIRDNPALDIAPRVFLFGAKAAPGYYLAKNIIYAINQVADK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH INNDPIVKDRLKVVFIPDYRVSVAELMIPAADVSEQISTAGKEASGTGNMKMALNGALTV CCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCEEEE GTLDGANVEIAEQVGDENIFIFGHTVDQVKAILAKGYQPKKYVKADPHLKSILDELASGA EECCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC FSQGDKQAFDMMLHSLLEGGDPYLVLADFASYCQAQKQIDALYRDKDEWTRRAILNTARV CCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GMFSSDRSIRDYQQRIWQAKR CCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SQPMLKKDDFLAALTRQWQRFGLTSAQQMTPYQWWEAVSAALAEQLSAQPAPSKPKNVQ CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RHVNYISMEFLIGRLTANNLINLGWYDTVDALLAEQQVKLSDLLEQETDPALGNGGLGRL HHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AACFLDSMATVEQPATGYGLNYQYGLFRQSFRECKQQEAPDNWQRESYPWFRHNAALAVD HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEE VGFGGNLVKQADGRQLWRPAFTLRGEAWDLPVLGFRNGVTQPLRLWQATHQHPFDLTLFN ECCCCCHHCCCCCCHHHCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC DGKFLLAEQNGVEAEKLTKVLYPNDNHLAGKRLRLMQQYFQCACSVADILRKHHLAGRKL CCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AELPDYEVIQLNDTHPTIAIPEMLRVLLDEHQLSWDAAWAITSKTFAYTNHTLMPEALEC HCCCCCEEEEECCCCCCEEHHHHHHHHHHHHCCCCHHHEEEECCEEEECCCCCCHHHHHH WDEKLVRSLLPRHFVIIKQINAQFKKLVNKQWPGNDEVWAKLAVHHNKQVRMANLCVVSG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHEEEEEC FAVNGVAQLHSDLIIKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALSGLIDDTLKV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCHHHHHHHCCCEEE EWANDLDVLQDLEPYAEDPAFRQRYQQIKYDNKVKLAHYVKRVMGLVINPDAIFDVQIKR EECCCHHHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCEEECCCCEEHHHHHH LHEYKRQHLNLLHILSLYRQIRDNPALDIAPRVFLFGAKAAPGYYLAKNIIYAINQVADK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH INNDPIVKDRLKVVFIPDYRVSVAELMIPAADVSEQISTAGKEASGTGNMKMALNGALTV CCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCEEEE GTLDGANVEIAEQVGDENIFIFGHTVDQVKAILAKGYQPKKYVKADPHLKSILDELASGA EECCCCCCHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC FSQGDKQAFDMMLHSLLEGGDPYLVLADFASYCQAQKQIDALYRDKDEWTRRAILNTARV CCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC GMFSSDRSIRDYQQRIWQAKR CCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037809; 9278503; 3155826; 2845225; 6283313; 6339728; 6986282; 9009262; 10220320; 10469642 [H]