| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is damX [H]
Identifier: 51598038
GI number: 51598038
Start: 4448046
End: 4449035
Strand: Reverse
Name: damX [H]
Synonym: YPTB3748
Alternate gene names: 51598038
Gene position: 4449035-4448046 (Counterclockwise)
Preceding gene: 51598039
Following gene: 51598037
Centisome position: 93.77
GC content: 48.38
Gene sequence:
>990_bases ATGGATGATTTAAAGCTGGATGACGATCTGAAACCAGATAGCAGTGATCGTCGTCCTACACGCTCTCGCAAGTCCCCAAC CGGGCCTAAACTTGCTGTTTCACGCCAACATATGATGATTGGTATTGGCATTTTAGTGTTGCTATTGATCATTATCGCTA TCGGTTCTGCCTTGAAAGCACCTACCGAACATGAAGCGTCCCAACAAAACCCAAATGTTAATGCGGCGCGAGATATCAAC TTATCTGATTCGTCTTCGTTAACCAGCGGTAATAATAACCAGCCCAGTATTGCGAACAATACCAGCTATGGTCATGATGC CAGTGGTGTAAAGAATACGGCTCCACCGCAAGATATCAGTGCTCCGCCAATTTCGCCAACGCCAACCGAGGCTGCAATAC CGCCTTCGGCTAACAGCACGACTCAGCGGATTGAATTGCCTGGTAATATGTCCGATGCCCTCTCTCAGACCCAAGGGCAG GTGGATACGTTATCTCAGAATATCAGTGACGCTCATACATCAACACTACCAACGGCGGCAGCAACTGTTGCTCCATCGAA AGGGGCAAAAGTACCTGCTACGCGTGAAACGATTACGCAACCGGTACAGAAACAGGCCACTAAGCAACCGGCGGTTAACC ATAAAAATACCGCAACTGTGGCCGTTCCTCCTGCTACATCGGGTACGCCTAAATCAGGCGCAGCCAGTAGTCGTGCATTG AGCAGTGCGCCGAGTAGCCACTACACGCTGCAATTAAGCAGCGCATCGCGCTCAGACACCCTGAATGCCTACGCAAAGCA GCAAAATTTAACTGACTATCATGTGTACGAAACCAAACGTGATGGTAAGCCTTGGTACATTCTAGTGAGTGGTAATTATG CCTCCTCTGCGGAGGCAAAAAAGGCAATCACAACATTACCCGCTGATGTTCAAGCGAAAAAGCCATGGGTTAAGCCTGTA CAACAAGTACAGCAAGACCTTAAAAAATAA
Upstream 100 bases:
>100_bases TTTGTGCAGACAGTATTAAGCTGTTTGCCGTCGGTCAAATCAATCAGCCGGATCGCAATAATTGATGCGGCGGGCTTTTG CCTCTAGTTGGAGGGTTTAA
Downstream 100 bases:
>100_bases ACCATTCTGATTTGTGCGCTGATGTGCTGTTTGAAACAGAGTACAATCTGCGGCTCTGAATTATTAAGTAGCTAACTGAC GGCATGAAGAAAAACCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDDLKLDDDLKPDSSDRRPTRSRKSPTGPKLAVSRQHMMIGIGILVLLLIIIAIGSALKAPTEHEASQQNPNVNAARDIN LSDSSSLTSGNNNQPSIANNTSYGHDASGVKNTAPPQDISAPPISPTPTEAAIPPSANSTTQRIELPGNMSDALSQTQGQ VDTLSQNISDAHTSTLPTAAATVAPSKGAKVPATRETITQPVQKQATKQPAVNHKNTATVAVPPATSGTPKSGAASSRAL SSAPSSHYTLQLSSASRSDTLNAYAKQQNLTDYHVYETKRDGKPWYILVSGNYASSAEAKKAITTLPADVQAKKPWVKPV QQVQQDLKK
Sequences:
>Translated_329_residues MDDLKLDDDLKPDSSDRRPTRSRKSPTGPKLAVSRQHMMIGIGILVLLLIIIAIGSALKAPTEHEASQQNPNVNAARDIN LSDSSSLTSGNNNQPSIANNTSYGHDASGVKNTAPPQDISAPPISPTPTEAAIPPSANSTTQRIELPGNMSDALSQTQGQ VDTLSQNISDAHTSTLPTAAATVAPSKGAKVPATRETITQPVQKQATKQPAVNHKNTATVAVPPATSGTPKSGAASSRAL SSAPSSHYTLQLSSASRSDTLNAYAKQQNLTDYHVYETKRDGKPWYILVSGNYASSAEAKKAITTLPADVQAKKPWVKPV QQVQQDLKK >Mature_329_residues MDDLKLDDDLKPDSSDRRPTRSRKSPTGPKLAVSRQHMMIGIGILVLLLIIIAIGSALKAPTEHEASQQNPNVNAARDIN LSDSSSLTSGNNNQPSIANNTSYGHDASGVKNTAPPQDISAPPISPTPTEAAIPPSANSTTQRIELPGNMSDALSQTQGQ VDTLSQNISDAHTSTLPTAAATVAPSKGAKVPATRETITQPVQKQATKQPAVNHKNTATVAVPPATSGTPKSGAASSRAL SSAPSSHYTLQLSSASRSDTLNAYAKQQNLTDYHVYETKRDGKPWYILVSGNYASSAEAKKAITTLPADVQAKKPWVKPV QQVQQDLKK
Specific function: Directly or indirectly interferes with cell division [H]
COG id: COG3266
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789790, Length=366, Percent_Identity=41.2568306010929, Blast_Score=179, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 34705; Mature: 34705
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLKLDDDLKPDSSDRRPTRSRKSPTGPKLAVSRQHMMIGIGILVLLLIIIAIGSALKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC PTEHEASQQNPNVNAARDINLSDSSSLTSGNNNQPSIANNTSYGHDASGVKNTAPPQDIS CCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APPISPTPTEAAIPPSANSTTQRIELPGNMSDALSQTQGQVDTLSQNISDAHTSTLPTAA CCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH ATVAPSKGAKVPATRETITQPVQKQATKQPAVNHKNTATVAVPPATSGTPKSGAASSRAL HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH SSAPSSHYTLQLSSASRSDTLNAYAKQQNLTDYHVYETKRDGKPWYILVSGNYASSAEAK HCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH KAITTLPADVQAKKPWVKPVQQVQQDLKK HHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MDDLKLDDDLKPDSSDRRPTRSRKSPTGPKLAVSRQHMMIGIGILVLLLIIIAIGSALKA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCC PTEHEASQQNPNVNAARDINLSDSSSLTSGNNNQPSIANNTSYGHDASGVKNTAPPQDIS CCHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APPISPTPTEAAIPPSANSTTQRIELPGNMSDALSQTQGQVDTLSQNISDAHTSTLPTAA CCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH ATVAPSKGAKVPATRETITQPVQKQATKQPAVNHKNTATVAVPPATSGTPKSGAASSRAL HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHH SSAPSSHYTLQLSSASRSDTLNAYAKQQNLTDYHVYETKRDGKPWYILVSGNYASSAEAK HCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH KAITTLPADVQAKKPWVKPVQQVQQDLKK HHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA