| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597911
Identifier: 51597911
GI number: 51597911
Start: 4306508
End: 4307125
Strand: Reverse
Name: 51597911
Synonym: YPTB3620
Alternate gene names: NA
Gene position: 4307125-4306508 (Counterclockwise)
Preceding gene: 51597912
Following gene: 51597908
Centisome position: 90.78
GC content: 31.23
Gene sequence:
>618_bases ATGCGAAAAGTTTATCAATTTATACATACGTCTATACATAATGAAGATAGCGGGATTAAATTTGGCGGCGGGGCATTCAT TGAAAATGAATGGCCCAAAAATCCTCTTGGAGAAGACCTGTCATTACTACTTACTATAAATAATGATCAGTTAAATAAAA ATAACAATTTTTTCCACCTTCCAGATGGAAAGTTTATATCTGTGTTTTCAACCTATAATGAGAACAGATATTTTCTAGAC GATATAGTTTTTTTTGGTGATGATGTGGAGTTGGATTATATAAAATCTGGATTTACAAGAGTAACTCTTAGTGAAAGTTC AAAACTGAGTGTGAACAATAATCATCTTGCTTGTAAAAATATTAAATTAGAGGAAAGAAAAATAATGGATAATGATTACC CTGCTTTTTCTTTTTTATCAAATCAGATTCCAAATGGGATGATTGGCTCTGAGAAGCTTATAAAAGAATATGATTTTATA TGTCAACTGTACTCGGCCGATATACCATCAAAAGACGGAGGGATATTAGGTCTGTCAGATGCAATTGGTTATCTTTTTCT AAAAAAAGATATTGATGATTATAATAATGCTGGTTTGTTCTTTGTCCAGACAGCATAA
Upstream 100 bases:
>100_bases GCCATGAAAAGAGCGGGTGTTCCTGAAACACAAATTAGTAAATTACGAGGCAACGCGGAAAAATTTTATGGCAATCTTTC TGGGTGTTAACGGAGATATT
Downstream 100 bases:
>100_bases TTTTAAAGAGTAACTTGGAAAGATCCTCTTTGGATCTTTCCAGTTATTTTTATCAGTTGCTACACCAACATATTACCCTG CTGCCCCCGAACAATCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MRKVYQFIHTSIHNEDSGIKFGGGAFIENEWPKNPLGEDLSLLLTINNDQLNKNNNFFHLPDGKFISVFSTYNENRYFLD DIVFFGDDVELDYIKSGFTRVTLSESSKLSVNNNHLACKNIKLEERKIMDNDYPAFSFLSNQIPNGMIGSEKLIKEYDFI CQLYSADIPSKDGGILGLSDAIGYLFLKKDIDDYNNAGLFFVQTA
Sequences:
>Translated_205_residues MRKVYQFIHTSIHNEDSGIKFGGGAFIENEWPKNPLGEDLSLLLTINNDQLNKNNNFFHLPDGKFISVFSTYNENRYFLD DIVFFGDDVELDYIKSGFTRVTLSESSKLSVNNNHLACKNIKLEERKIMDNDYPAFSFLSNQIPNGMIGSEKLIKEYDFI CQLYSADIPSKDGGILGLSDAIGYLFLKKDIDDYNNAGLFFVQTA >Mature_205_residues MRKVYQFIHTSIHNEDSGIKFGGGAFIENEWPKNPLGEDLSLLLTINNDQLNKNNNFFHLPDGKFISVFSTYNENRYFLD DIVFFGDDVELDYIKSGFTRVTLSESSKLSVNNNHLACKNIKLEERKIMDNDYPAFSFLSNQIPNGMIGSEKLIKEYDFI CQLYSADIPSKDGGILGLSDAIGYLFLKKDIDDYNNAGLFFVQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23328; Mature: 23328
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVYQFIHTSIHNEDSGIKFGGGAFIENEWPKNPLGEDLSLLLTINNDQLNKNNNFFHL CHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEC PDGKFISVFSTYNENRYFLDDIVFFGDDVELDYIKSGFTRVTLSESSKLSVNNNHLACKN CCCCEEEEEEECCCCEEEEEEEEEECCCCEEHHHHCCCEEEEECCCCEEEECCCEEEEEC IKLEERKIMDNDYPAFSFLSNQIPNGMIGSEKLIKEYDFICQLYSADIPSKDGGILGLSD CEEHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH AIGYLFLKKDIDDYNNAGLFFVQTA HHEEEEEECCCCCCCCCCEEEEEEC >Mature Secondary Structure MRKVYQFIHTSIHNEDSGIKFGGGAFIENEWPKNPLGEDLSLLLTINNDQLNKNNNFFHL CHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEC PDGKFISVFSTYNENRYFLDDIVFFGDDVELDYIKSGFTRVTLSESSKLSVNNNHLACKN CCCCEEEEEEECCCCEEEEEEEEEECCCCEEHHHHCCCEEEEECCCCEEEECCCEEEEEC IKLEERKIMDNDYPAFSFLSNQIPNGMIGSEKLIKEYDFICQLYSADIPSKDGGILGLSD CEEHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHH AIGYLFLKKDIDDYNNAGLFFVQTA HHEEEEEECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA