Click here to switch to the map view.

The map label for this gene is 51597908

Identifier: 51597908

GI number: 51597908

Start: 4302826

End: 4305024

Strand: Reverse

Name: 51597908

Synonym: YPTB3617

Alternate gene names: NA

Gene position: 4305024-4302826 (Counterclockwise)

Preceding gene: 51597911

Following gene: 51597907

Centisome position: 90.73

GC content: 58.07

Gene sequence:

>2199_bases
ATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCACGGTGACGCCGACCCATATCGTCTCGCC
GGAGGCCGCCCCAACCGTGAGTGGCGCTCAGATGACCGAGATGGCCGGGGGGATTGGGGATGCGGTGGGCGGCACTGCCG
GTAAGCGCATCAATCAGGCCGCCGAGGTGGCTAAAACCGCCCTGGATGCCAAGGCAAAAGTCCTGGACGGCGGCGTCACG
CCGCTGAATCTGGCCGCGGGCGGGGCCGGGGCGGGATTGCCGGACAGCGCGGCGGCGGCGCTTACCCGCCTGGTCAAACA
GCCCTCAGGCCTGCAATTTACCCTGACGGCGGCCGGTTTACCGCCCCAGACCTTTGCGGTGGTGGATTTCACCCTGAGCG
AGATGCTCTCCACGCCGTTTGTGCTCAATGTCGGGCTGGCGAGTGCCGATCCGGCGGTAGATTTTGCGGCGGTATTGGAT
GAAGACGCCACGCTGTTTATCTGGCGCGAAGGGGTACTGCAACGCAGCATCACCGGCATGGTCGCCAGCTTTGAACAGGG
CGATACCGGTTTTCATCAGACCCGCTACAGCATGGTGATCCGCCCGGCGCTATGGCGCACCAGCCTGCGGCGCAATGCCC
GCATCTTCCAGCAGGCCTCGGTGGAAGAGATCATCACCACCCTGCTGAAAGAGAACGGCATCAACGATTTTGCTTTTGGT
TTTCGCCACCCGCACCCGGTGCGCGAGTTCTGCGTGCAATATCAGGAGTCCGATTTTGATTTTATCCAGCGCCTGACGGC
AGAAGAGGGGATTTTCTACTACTTCGAGTTCAGCGCCGGGAAAAATACCGTGGTGTATGCCGATGATGTTGGCTCCCTGC
CGAAAGGCGCGTCACTGCCCTATAACCCGAATGTGGCGGCGCAGGCGCAGGAACTGAGTATCACCACCTTCACCCGCAGT
GCGCAGGTGCGCCCGGCGATGGTGCAACTGAAAGACTACACCTTTAAAAACCCGAACTGGGCCGCGGCCTTCAGCGAACA
GTCGGGAGAACTGCAAAACCAGCGACCGGACTACGAGCATTTTGATTTTCCGGGGCGCTTCAAAGATGCCCAGCACGGGC
AGGATTTTACCCGCTACCGGCTGGACGCACTGCGCAATGACGCCAATCTGGGGCAGGGGGCGAGCAATGATTTTACCCTC
CAGCCGGGGCAGTTGTTCAGCCTGTACAACCACCCACGTAGTGACCTGAACCACGCCTGGCAGTTGCTCGGTATTCAGCA
CAGCGGCAAACAGATGCAGGCGCTGGAGCAGGCATCTGGCGATCAGGGCACGGTGCTGTTCAACCACTTCAGTTTTATTC
CGCACACCCAGACCTGGCGGCCGACGCCGTTGGCTAAACCGGCGATGGACGGCCCGCAGATCGCCATGGTGGTGGGGCCG
CCGGGGGAAGAGATTTACTGCGACGAATACGGGCGCATCCGCCTGCAATTTTTATGGGATCGCTACGGGCAGAGCAATGA
CAACAGCTCCTGCTGGATCCGGGTAACCCAGCCGTGGGCGGGCCAGGGCTGGGGCATGCTGGCCATCCCGCGTATTGGTC
AGGAAGTGGTGGTGGATTTTCTGCACGGCGATCCGGATCAACCGATTGTCACGGGGCGGACCTATCACGCCAACAACATC
CCGCCGGGGTCGTTACCGGCCAGTAAAACCCAGATGGCGTTCCGCTCAAAAACCCACAAAGGGGAAGGCTACAACGAAAT
GCGCTTCGAAGACGCCAAAGGCGGCGAAGGGCTGTTTATGCATGCTCAAAAGGATATGAGTACCACGGTAAAAGATAACC
AGACGACGACGGTGGAGAAAGGTAATCAAACCGTCACCGTGGAAAAAGGTGACAGGACAGTCACGGTCGCGACCGGAAAT
GAAACCACAGATATTACCCAAGGGAGCCTGACCGAGACGATCAAAGTGCGTCGCAGTACCTGCGCGAATTTTATTCAGGT
GAAGGCTGAAGGTGATGCGCCTGGTACGCAACTTTATACCGCGACGGAACAGATAAAGTTCGTGGTGGGCAAGAGCAGCA
TTACCTTAAATCCGGACTCTATTATTCTGCAATTTTCTGGCTCTACCTCTATTACGCTGAATGCCGCCAATATTGACGCC
ATCGCGCCATTGATTAACTTAAATAAAGACAAGGGATAA

Upstream 100 bases:

>100_bases
AAAACAAATTGATGACCGCTGGAATGCCTTACTCAGCCGTTATCACCACTTAACGCAGCAGACGAACTCTGCCCGTTAAC
CTCCAGGAGACAGCAACGCG

Downstream 100 bases:

>100_bases
GCATGTATTACTTCAACGAGGGTTCCCTAGAGTTGCCTGAGGCATGGCGCGATATGACGGTAAATGTGCTGACATCGTCT
CTGGATGAAACGGTGGGGTT

Product: Rhs accessory genetic element

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; Rhs Element Vgr Family; Rhs Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Type VI Secretion System VgrG Family Protein; VgrG Family T6SS G; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein

Number of amino acids: Translated: 732; Mature: 732

Protein sequence:

>732_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEMAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSAAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSTPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGN
ETTDITQGSLTETIKVRRSTCANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA
IAPLINLNKDKG

Sequences:

>Translated_732_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEMAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSAAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSTPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGN
ETTDITQGSLTETIKVRRSTCANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA
IAPLINLNKDKG
>Mature_732_residues
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEMAGGIGDAVGGTAGKRINQAAEVAKTALDAKAKVLDGGVT
PLNLAAGGAGAGLPDSAAAALTRLVKQPSGLQFTLTAAGLPPQTFAVVDFTLSEMLSTPFVLNVGLASADPAVDFAAVLD
EDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSITTFTRS
AQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTL
QPGQLFSLYNHPRSDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNI
PPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGN
ETTDITQGSLTETIKVRRSTCANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA
IAPLINLNKDKG

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79717; Mature: 79717

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00154 ATPASE_E1_E2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEMAGGIGDAVGGTAGKRINQA
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
AEVAKTALDAKAKVLDGGVTPLNLAAGGAGAGLPDSAAAALTRLVKQPSGLQFTLTAAGL
HHHHHHHHHCHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
PPQTFAVVDFTLSEMLSTPFVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGM
CCCEEEEEHEEHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHH
VASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
HHHCCCCCCCHHHHEEHEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLP
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
YNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEH
CCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCC
FDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRSDLNHAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHE
QLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
EEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDF
CCCEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHH
LHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFM
HCCCCCCCEEECCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEE
HAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGNETTDITQGSLTETIKVRRST
EECCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
CANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA
CCEEEEEEECCCCCCCEEEEEEEEEEEEEECCEEEECCCEEEEEECCCCEEEEEECCCCH
IAPLINLNKDKG
HHHHEECCCCCC
>Mature Secondary Structure
MFAHDKANNNKAADKTGTVTPTHIVSPEAAPTVSGAQMTEMAGGIGDAVGGTAGKRINQA
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
AEVAKTALDAKAKVLDGGVTPLNLAAGGAGAGLPDSAAAALTRLVKQPSGLQFTLTAAGL
HHHHHHHHHCHHHEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
PPQTFAVVDFTLSEMLSTPFVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGM
CCCEEEEEHEEHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHH
VASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFG
HHHCCCCCCCHHHHEEHEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHC
FRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGASLP
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCC
YNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEH
CCCCCCCCHHEEEEEEEECCCCCCCEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCCC
FDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRSDLNHAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHCCCHHHHHHHE
QLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGP
EEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
PGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDF
CCCEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCCCCCEEECCCCCHHHHHHH
LHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFM
HCCCCCCCEEECCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEE
HAQKDMSTTVKDNQTTTVEKGNQTVTVEKGDRTVTVATGNETTDITQGSLTETIKVRRST
EECCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH
CANFIQVKAEGDAPGTQLYTATEQIKFVVGKSSITLNPDSIILQFSGSTSITLNAANIDA
CCEEEEEEECCCCCCCEEEEEEEEEEEEEECCEEEECCCEEEEEECCCCEEEEEECCCCH
IAPLINLNKDKG
HHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA