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The map label for this gene is yedZ

Identifier: 51597860

GI number: 51597860

Start: 4249278

End: 4249898

Strand: Direct

Name: yedZ

Synonym: YPTB3569

Alternate gene names: 51597860

Gene position: 4249278-4249898 (Clockwise)

Preceding gene: 51597859

Following gene: 51597861

Centisome position: 89.56

GC content: 48.31

Gene sequence:

>621_bases
ATGCGGCTCAGTTTACGACACATCACATGGCTAAAAATCGCCATTTGGCTGGCGGCAACATTACCGCTTCTGTGGCTCGT
ATTATCGATCAATCTGGGGGGGCTCAGTGCCGATCCCGCCAAAGATATTCAACATTTTACCGGGCGGATGGCCCTTAAAT
TACTTTTGGCAACCTTATTGGTCTCGCCATTGGCTCGCTACAGTAAACAACCGTTGTTACTGCGCTGCCGCCGCTTATTA
GGCCTATGGTGTTTTGCCTGGGGAACACTGCATTTACTCAGCTACTCGATATTGGAACTGGGGCTGAGTAATATTGGCCT
GTTGGGGCATGAGTTGATTAACCGCCCTTATCTGACATTGGGCATTATCAGTTGGCTGGTGTTACTGGCGCTGGCGCTCA
CCTCCACCCGGTGGGCGCAACGAAAAATGGGCGCTCGCTGGCAAAAACTACATAATTGGGTGTATGTGGTCGCCATTTTA
GCCCCTATTCATTATCTTTGGTCAGTGAAAACACTCTCACCTTGGCCCATTATCTATGCGGTGATGGCAGCACTATTACT
GTTACTACGTTATAAATTACTGCTACCGCGTTATAAAAAATTTCGTCAATGGTTCCGCTAA

Upstream 100 bases:

>100_bases
GTATTCTGGATGTAAAACGCCAGCCCACCCTGTTATTTAACGGCTATGCTGACCAAGTGGCATCACTATATCGTGGTTTA
GATTTGCGGAAGAATTTCTA

Downstream 100 bases:

>100_bases
AAGTCCGAACCGCTCATCGCTTCCCCCCTGTAACATCCCGTGTGCAGGGGGTAAATCGATGAGTGAACGCACAGTTCGCT
ATTTTTTTTATTGAATATCT

Product: sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRLSLRHITWLKIAIWLAATLPLLWLVLSINLGGLSADPAKDIQHFTGRMALKLLLATLLVSPLARYSKQPLLLRCRRLL
GLWCFAWGTLHLLSYSILELGLSNIGLLGHELINRPYLTLGIISWLVLLALALTSTRWAQRKMGARWQKLHNWVYVVAIL
APIHYLWSVKTLSPWPIIYAVMAALLLLLRYKLLLPRYKKFRQWFR

Sequences:

>Translated_206_residues
MRLSLRHITWLKIAIWLAATLPLLWLVLSINLGGLSADPAKDIQHFTGRMALKLLLATLLVSPLARYSKQPLLLRCRRLL
GLWCFAWGTLHLLSYSILELGLSNIGLLGHELINRPYLTLGIISWLVLLALALTSTRWAQRKMGARWQKLHNWVYVVAIL
APIHYLWSVKTLSPWPIIYAVMAALLLLLRYKLLLPRYKKFRQWFR
>Mature_206_residues
MRLSLRHITWLKIAIWLAATLPLLWLVLSINLGGLSADPAKDIQHFTGRMALKLLLATLLVSPLARYSKQPLLLRCRRLL
GLWCFAWGTLHLLSYSILELGLSNIGLLGHELINRPYLTLGIISWLVLLALALTSTRWAQRKMGARWQKLHNWVYVVAIL
APIHYLWSVKTLSPWPIIYAVMAALLLLLRYKLLLPRYKKFRQWFR

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family

Homologues:

Organism=Escherichia coli, GI1788283, Length=203, Percent_Identity=68.9655172413793, Blast_Score=270, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEDZ_YERPA (Q1C1N6)

Other databases:

- EMBL:   CP000308
- RefSeq:   YP_653581.1
- ProteinModelPortal:   Q1C1N6
- STRING:   Q1C1N6
- GeneID:   4118650
- GenomeReviews:   CP000308_GR
- KEGG:   ypa:YPA_3674
- eggNOG:   COG2717
- HOGENOM:   HBG751530
- OMA:   ILGLDWG
- ProtClustDB:   PRK05419
- BioCyc:   YPES360102:YPA_3674-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01207
- InterPro:   IPR013130
- InterPro:   IPR022837

Pfam domain/function: PF01794 Ferric_reduct

EC number: NA

Molecular weight: Translated: 23851; Mature: 23851

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d975860)-; HASH(0x1d3babd4)-; HASH(0x1e64deac)-; HASH(0x1e28fde4)-; HASH(0x1c6e3fe4)-; HASH(0x1e04ffbc)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLRHITWLKIAIWLAATLPLLWLVLSINLGGLSADPAKDIQHFTGRMALKLLLATLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSPLARYSKQPLLLRCRRLLGLWCFAWGTLHLLSYSILELGLSNIGLLGHELINRPYLTL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GIISWLVLLALALTSTRWAQRKMGARWQKLHNWVYVVAILAPIHYLWSVKTLSPWPIIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VMAALLLLLRYKLLLPRYKKFRQWFR
HHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MRLSLRHITWLKIAIWLAATLPLLWLVLSINLGGLSADPAKDIQHFTGRMALKLLLATLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSPLARYSKQPLLLRCRRLLGLWCFAWGTLHLLSYSILELGLSNIGLLGHELINRPYLTL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
GIISWLVLLALALTSTRWAQRKMGARWQKLHNWVYVVAILAPIHYLWSVKTLSPWPIIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VMAALLLLLRYKLLLPRYKKFRQWFR
HHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA