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The map label for this gene is yedY [H]

Identifier: 51597859

GI number: 51597859

Start: 4248178

End: 4249278

Strand: Direct

Name: yedY [H]

Synonym: YPTB3568

Alternate gene names: 51597859

Gene position: 4248178-4249278 (Clockwise)

Preceding gene: 51597858

Following gene: 51597860

Centisome position: 89.54

GC content: 50.14

Gene sequence:

>1101_bases
ATGCATAACACGTTTACTCATACTAAAAACAATACTCATACTAAAAACAATACTCAGGCTAAAAACAGCGGTTCTCAGAC
GAAAAGCAATGCGGTCAGTCTCAATAAGCCACGAAAACTGACTGAGGCAGATGTCACGCCAGAGAGTATTTTTTATCAAC
GACGTAAGGTGTTGCAGGCTCTGGGGATCACCGCCGCCACCTTGGCTTTGCCAGCATCAGCACAAGCCGATTTACTGGCC
TGGTTTAAAGGTAACGAGCCGCCCAAAGCGCCCTCAGGTAAACCATTGACGTTCACCCCATCAGCCGCTTACCACCCAGA
CTTGGCTTTAACGCCAGAAGACAAAGTGACCGGGTACAATAATTTCTATGAGTTTGGGTTGGATAAAGCTGATCCCGCCG
CGAATGCTGGCACGCTGAAAACAGAGGACTGGCAGATTAAGATTGACGGCGATGTCGTTAAGCCCATGACGTTGGATATG
GATTATCTGATGAAATGCTTTCCCCTTGAAGAGCGAATCTATCGCCTACGCTGCGTCGAAGCGTGGTCGATGGTCGTGCC
ATGGATCGGTTTTGAGTTAGGGAAACTGCTGAAATTAGCAGAGCCAACCAGTAACGCCCGCTATGTGGCGTTCCAAACAT
TGTATGCTCCAGATCAAATGCCTGGGCAGAAAAACCGCTTTATTGGCGGGGGACTGGACTACCCCTATGTCGAAGGGCTG
CGGTTGGATGAAGCCATGCACCCGCTGGCCTTTATGGTTGTTGGTGTGTATGGCAAAACCCTGCCTCCGCAAAATGGTGC
GCCGCTACGACTCATGACGCCGTGGAAATATGGCTTTAAGAGCATTAAGTCCATCGTGCATATTCGCCTGACACGTGATC
AGCCGCCAACCACCTGGAATTTGAGCGCCCCCAACGAATATGGCTTTTATGCCAATGTGAACCCGCACGTCGATCATCCC
CGCTGGTCACAGGCCACCGAGCGCGTTATCGGTTCTGGCGGTATTCTGGATGTAAAACGCCAGCCCACCCTGTTATTTAA
CGGCTATGCTGACCAAGTGGCATCACTATATCGTGGTTTAGATTTGCGGAAGAATTTCTAA

Upstream 100 bases:

>100_bases
CTTAGAACCTTCGCACTTGTTCCCATTTGCCACCATGATTAACCACATCAGGGGCAACGCGATTAACGACATCAAGGGCA
ACTATCCGACGGAGTCTGCT

Downstream 100 bases:

>100_bases
TGCGGCTCAGTTTACGACACATCACATGGCTAAAAATCGCCATTTGGCTGGCGGCAACATTACCGCTTCTGTGGCTCGTA
TTATCGATCAATCTGGGGGG

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MHNTFTHTKNNTHTKNNTQAKNSGSQTKSNAVSLNKPRKLTEADVTPESIFYQRRKVLQALGITAATLALPASAQADLLA
WFKGNEPPKAPSGKPLTFTPSAAYHPDLALTPEDKVTGYNNFYEFGLDKADPAANAGTLKTEDWQIKIDGDVVKPMTLDM
DYLMKCFPLEERIYRLRCVEAWSMVVPWIGFELGKLLKLAEPTSNARYVAFQTLYAPDQMPGQKNRFIGGGLDYPYVEGL
RLDEAMHPLAFMVVGVYGKTLPPQNGAPLRLMTPWKYGFKSIKSIVHIRLTRDQPPTTWNLSAPNEYGFYANVNPHVDHP
RWSQATERVIGSGGILDVKRQPTLLFNGYADQVASLYRGLDLRKNF

Sequences:

>Translated_366_residues
MHNTFTHTKNNTHTKNNTQAKNSGSQTKSNAVSLNKPRKLTEADVTPESIFYQRRKVLQALGITAATLALPASAQADLLA
WFKGNEPPKAPSGKPLTFTPSAAYHPDLALTPEDKVTGYNNFYEFGLDKADPAANAGTLKTEDWQIKIDGDVVKPMTLDM
DYLMKCFPLEERIYRLRCVEAWSMVVPWIGFELGKLLKLAEPTSNARYVAFQTLYAPDQMPGQKNRFIGGGLDYPYVEGL
RLDEAMHPLAFMVVGVYGKTLPPQNGAPLRLMTPWKYGFKSIKSIVHIRLTRDQPPTTWNLSAPNEYGFYANVNPHVDHP
RWSQATERVIGSGGILDVKRQPTLLFNGYADQVASLYRGLDLRKNF
>Mature_366_residues
MHNTFTHTKNNTHTKNNTQAKNSGSQTKSNAVSLNKPRKLTEADVTPESIFYQRRKVLQALGITAATLALPASAQADLLA
WFKGNEPPKAPSGKPLTFTPSAAYHPDLALTPEDKVTGYNNFYEFGLDKADPAANAGTLKTEDWQIKIDGDVVKPMTLDM
DYLMKCFPLEERIYRLRCVEAWSMVVPWIGFELGKLLKLAEPTSNARYVAFQTLYAPDQMPGQKNRFIGGGLDYPYVEGL
RLDEAMHPLAFMVVGVYGKTLPPQNGAPLRLMTPWKYGFKSIKSIVHIRLTRDQPPTTWNLSAPNEYGFYANVNPHVDHP
RWSQATERVIGSGGILDVKRQPTLLFNGYADQVASLYRGLDLRKNF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=334, Percent_Identity=75.4491017964072, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 40965; Mature: 40965

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNTFTHTKNNTHTKNNTQAKNSGSQTKSNAVSLNKPRKLTEADVTPESIFYQRRKVLQA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LGITAATLALPASAQADLLAWFKGNEPPKAPSGKPLTFTPSAAYHPDLALTPEDKVTGYN
HCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCC
NFYEFGLDKADPAANAGTLKTEDWQIKIDGDVVKPMTLDMDYLMKCFPLEERIYRLRCVE
CHHHHCCCCCCCCCCCCCEECCCEEEEECCCEECCEEECHHHHHHHCCHHHHHHHHHHHH
AWSMVVPWIGFELGKLLKLAEPTSNARYVAFQTLYAPDQMPGQKNRFIGGGLDYPYVEGL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCHHCCE
RLDEAMHPLAFMVVGVYGKTLPPQNGAPLRLMTPWKYGFKSIKSIVHIRLTRDQPPTTWN
EHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEEECCCCCCEEE
LSAPNEYGFYANVNPHVDHPRWSQATERVIGSGGILDVKRQPTLLFNGYADQVASLYRGL
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHCC
DLRKNF
CCCCCC
>Mature Secondary Structure
MHNTFTHTKNNTHTKNNTQAKNSGSQTKSNAVSLNKPRKLTEADVTPESIFYQRRKVLQA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH
LGITAATLALPASAQADLLAWFKGNEPPKAPSGKPLTFTPSAAYHPDLALTPEDKVTGYN
HCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCC
NFYEFGLDKADPAANAGTLKTEDWQIKIDGDVVKPMTLDMDYLMKCFPLEERIYRLRCVE
CHHHHCCCCCCCCCCCCCEECCCEEEEECCCEECCEEECHHHHHHHCCHHHHHHHHHHHH
AWSMVVPWIGFELGKLLKLAEPTSNARYVAFQTLYAPDQMPGQKNRFIGGGLDYPYVEGL
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCHHCCE
RLDEAMHPLAFMVVGVYGKTLPPQNGAPLRLMTPWKYGFKSIKSIVHIRLTRDQPPTTWN
EHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHEEEEEEECCCCCCEEE
LSAPNEYGFYANVNPHVDHPRWSQATERVIGSGGILDVKRQPTLLFNGYADQVASLYRGL
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCHHHHHHHHHHCC
DLRKNF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]