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The map label for this gene is ugpB [C]

Identifier: 51597740

GI number: 51597740

Start: 4085286

End: 4086530

Strand: Reverse

Name: ugpB [C]

Synonym: YPTB3443

Alternate gene names: 51597740

Gene position: 4086530-4085286 (Counterclockwise)

Preceding gene: 51597741

Following gene: 51597739

Centisome position: 86.13

GC content: 51.81

Gene sequence:

>1245_bases
ATGAAGATACTTTATTATATTGCCATCGCGATAGCCTCGCTGCCGCTTATGGCGGCCGAAAGGCTAGAAATTATGGTGCC
CAGCGGCAGCTATGTTTCTTTTATGCGTAATACCGTCACCCCTGAATTTAATAAGCTCTATCCCGAGGTTAATTTAGTGG
TATCCAATGACGAACAACTGGATACCCGAATGGCCGCCGGGGATAACCCCAATGTTTACATCGGTGTATTCGGCTATCAA
CCCGCCAAACTGGCGAAGCTTGGCAAGCTGGCGTATTTGGATAAATTCCCCGGTTTTGCCGAATTAAATGAACGTATCGA
TCCTCACTTCTTACGTGAAAACTTTGGCCGTACCTATTATATTCCGTGGAACGCCACCACCCAGATGATGATTTATAATA
AGGAGCTATTTGCTGAGGCAGGCTTGGATCCTGAGCGTCCTCCAGCGACCTGGGATGAATTTTTACTGGCGGCCGAAAAG
ATCTCCGCCTTGCCCCCTCGCTCAGACGGTAGCAAAGTCTACGGCACGGTATTCTGGAATGATGTGCTGTCATTCGGCAG
TTGGTACTGGAATCTGCTGACACCCATGTATTACAACGTTAATCAGGGCCAGTATCAGTTGCTAAACCGCTACGGTACCG
ACATCGTATTCGACCGTCCCGACGCCAACATGGCGCAGTTTATGCGTACCATGCAGCAGGCGCAGCGCTTTGCGCCACTG
ACCATGGAAAAAAGCTTCTTCTCCCGTAATATCGGCATGTGGCTACAATTCGGCTTCGGCTGGAAGGCCACCCTCTCGTC
GGCGGCTGAACGCCCAATGGTGGTAGGCCAGGACGTGGCCATCGCCCCGATCCCGGTACAAACCAAGGGCGACATCCACT
ACTCGGTATTGGATGGTCGGGCCATCATGATTTTCAAGGATGAGGCCAGGAAAGAGCAACTCAGTTGGGCGCTGCTCAAC
CTACTTATGCGCGACGATATCAATCTACAGGCCAATATTGCCCTGGGTCAGCTCCCTACGTTGAAGGCGCTGCAAGATGC
TCCCTATTTTCAGTCCGCAGAGGCACAGCCGTTCGTACAGCAACTACAACATGCGATCCTGAGTGAGCCTTTCGCCAATG
CGATGGAGGTGGCGAATATTATTCTCGCCAACTACAGCAAAGTGGTACTGAAAGGGGAAATATCCCCGGAACAAGCGGTT
GCCACCTCGGCACAGGCCGCACGCCAACTGCTCAATGAACACTGA

Upstream 100 bases:

>100_bases
TTGATTGAAAGAGAGACGCTATAGCGGCCGACTATTTGCCATAGCGCGAGATAAATAATGGCAATTGCCAAATATCCGCG
CTTCAGGATTAATCAATAAT

Downstream 100 bases:

>100_bases
GCCATGCACGCAGCGACCCGGTATCGATGCAGGTATTCCCTTAAGGAGCCGATGTGAAAAATAAAAATGTGATGATGGGC
TACCTGTTTATTGCGCCCTG

Product: ABC transporter, periplasmic sugar binding protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPEVNLVVSNDEQLDTRMAAGDNPNVYIGVFGYQ
PAKLAKLGKLAYLDKFPGFAELNERIDPHFLRENFGRTYYIPWNATTQMMIYNKELFAEAGLDPERPPATWDEFLLAAEK
ISALPPRSDGSKVYGTVFWNDVLSFGSWYWNLLTPMYYNVNQGQYQLLNRYGTDIVFDRPDANMAQFMRTMQQAQRFAPL
TMEKSFFSRNIGMWLQFGFGWKATLSSAAERPMVVGQDVAIAPIPVQTKGDIHYSVLDGRAIMIFKDEARKEQLSWALLN
LLMRDDINLQANIALGQLPTLKALQDAPYFQSAEAQPFVQQLQHAILSEPFANAMEVANIILANYSKVVLKGEISPEQAV
ATSAQAARQLLNEH

Sequences:

>Translated_414_residues
MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPEVNLVVSNDEQLDTRMAAGDNPNVYIGVFGYQ
PAKLAKLGKLAYLDKFPGFAELNERIDPHFLRENFGRTYYIPWNATTQMMIYNKELFAEAGLDPERPPATWDEFLLAAEK
ISALPPRSDGSKVYGTVFWNDVLSFGSWYWNLLTPMYYNVNQGQYQLLNRYGTDIVFDRPDANMAQFMRTMQQAQRFAPL
TMEKSFFSRNIGMWLQFGFGWKATLSSAAERPMVVGQDVAIAPIPVQTKGDIHYSVLDGRAIMIFKDEARKEQLSWALLN
LLMRDDINLQANIALGQLPTLKALQDAPYFQSAEAQPFVQQLQHAILSEPFANAMEVANIILANYSKVVLKGEISPEQAV
ATSAQAARQLLNEH
>Mature_414_residues
MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPEVNLVVSNDEQLDTRMAAGDNPNVYIGVFGYQ
PAKLAKLGKLAYLDKFPGFAELNERIDPHFLRENFGRTYYIPWNATTQMMIYNKELFAEAGLDPERPPATWDEFLLAAEK
ISALPPRSDGSKVYGTVFWNDVLSFGSWYWNLLTPMYYNVNQGQYQLLNRYGTDIVFDRPDANMAQFMRTMQQAQRFAPL
TMEKSFFSRNIGMWLQFGFGWKATLSSAAERPMVVGQDVAIAPIPVQTKGDIHYSVLDGRAIMIFKDEARKEQLSWALLN
LLMRDDINLQANIALGQLPTLKALQDAPYFQSAEAQPFVQQLQHAILSEPFANAMEVANIILANYSKVVLKGEISPEQAV
ATSAQAARQLLNEH

Specific function: Sn-Glycerol-3-Phosphate And Glycerophosphoryl Diester- Binding Protein Interacts With The Binding Protein-Dependent Transport System Ugpace. [C]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46804; Mature: 46804

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPEVNLVVSNDEQL
CCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCHHHHCCEEEEEECCCHHH
DTRMAAGDNPNVYIGVFGYQPAKLAKLGKLAYLDKFPGFAELNERIDPHFLRENFGRTYY
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCEEE
IPWNATTQMMIYNKELFAEAGLDPERPPATWDEFLLAAEKISALPPRSDGSKVYGTVFWN
EECCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHH
DVLSFGSWYWNLLTPMYYNVNQGQYQLLNRYGTDIVFDRPDANMAQFMRTMQQAQRFAPL
HHHHHHHHHHHHHCHHEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
TMEKSFFSRNIGMWLQFGFGWKATLSSAAERPMVVGQDVAIAPIPVQTKGDIHYSVLDGR
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEECCCCEEECCCCCCCCCEEEEEECCC
AIMIFKDEARKEQLSWALLNLLMRDDINLQANIALGQLPTLKALQDAPYFQSAEAQPFVQ
EEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCHHHH
QLQHAILSEPFANAMEVANIILANYSKVVLKGEISPEQAVATSAQAARQLLNEH
HHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILYYIAIAIASLPLMAAERLEIMVPSGSYVSFMRNTVTPEFNKLYPEVNLVVSNDEQL
CCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCCCCCHHHHCCEEEEEECCCHHH
DTRMAAGDNPNVYIGVFGYQPAKLAKLGKLAYLDKFPGFAELNERIDPHFLRENFGRTYY
HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCEEE
IPWNATTQMMIYNKELFAEAGLDPERPPATWDEFLLAAEKISALPPRSDGSKVYGTVFWN
EECCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEHHH
DVLSFGSWYWNLLTPMYYNVNQGQYQLLNRYGTDIVFDRPDANMAQFMRTMQQAQRFAPL
HHHHHHHHHHHHHCHHEEECCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
TMEKSFFSRNIGMWLQFGFGWKATLSSAAERPMVVGQDVAIAPIPVQTKGDIHYSVLDGR
HHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEECCCCEEECCCCCCCCCEEEEEECCC
AIMIFKDEARKEQLSWALLNLLMRDDINLQANIALGQLPTLKALQDAPYFQSAEAQPFVQ
EEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCHHHH
QLQHAILSEPFANAMEVANIILANYSKVVLKGEISPEQAVATSAQAARQLLNEH
HHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA