| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is mdtO [H]
Identifier: 51597734
GI number: 51597734
Start: 4077291
End: 4079192
Strand: Direct
Name: mdtO [H]
Synonym: YPTB3437
Alternate gene names: 51597734
Gene position: 4077291-4079192 (Clockwise)
Preceding gene: 51597733
Following gene: 51597735
Centisome position: 85.93
GC content: 53.26
Gene sequence:
>1902_bases ATGACGACGGTTGCTGACGGTACGCTTGGCGGCATAATCCGTCAGGCGAAAGCTGACTTAGCCTTTTTCCCAGGGCGGGT GGCGATGGCGTGGCGTGTTGCCGTGCTATGTGCATTGATGGCGATGATCGCCATGATATACGGCATCCCTGAATCTGCGA TTAGTTGCTATCTCATTATTTTTGTTATGAAGCCGGATGGTGTAGAGAGCATGGTGATGGCCGTGGCGATAACGATCCTG GTGTCGTTGGTCGTCGGGTTGGTATTTCTGCTTATCCATTTCACCCTAGAGGCCGCACCACTGCGCATGGCGGCCTTGAT TGTCAGCTCGTTTCTCTTTCTCTATCTCGGATCGGCCAGTAAGCTCGGCCCGGTAGGGAGTATTATTGCGCTGGTTATCG CTTATGTGATGACGTTACTGAGCAATATCCCAATGGGAGATGTGGCCACGCGGGGGCTGTTGTATGCCTGGTTGATGGCT GTTTCACCGATGTTGCTGATTATTGGGTTTAACCTTTTCTTTGGCCGAGCACCACAGACGTTATTGCGGGCCAGCTTAGC GGAGCGGTTATCCACGGTCGCCGAGACATTACGGCACCCCAATGCCGCCAATATGGCGCGGGTTGGAGAACAGCTACAGG AAGGGCAACATGAGCATCAACAGCGGGCGCTTTTTGTTCGTATCTTTCATCTACGGCCCTCGGCTGAAGCGGCCTGGCTT GAAAGTGCCGTAAAAAGCAGTTACCGGCTACTCTTGGTAACCTCGGCGTTACCTCCTACCTCACCAGAGGCCGTGCGCCT TGAGCTTGCGGCCTACTGTAGTGATGCGGCTCAGGCGATTGCCAGCGGTGATCTCGCGGCCCCCCCTCACTTCGCGATTG AGGATACCAGCGATGAAATCAATGAAATCAGAAACGCGCTGATCGCACTGGCAAATGCGGATAATGGGCAAGACCTGGAC GCCCCGAAATCCTCATTCTTTGCAGCAGACGCATTGACTAACCCTGTTCATCAGCAGTTTGCCCTGAAAACCACCGCCGC GGCTCTGATTTGCTACCTGATCTACACCGCACTGGATTGGCAGGACATTCATACTGCCATGATCACTTGCTATGTTGCCG CACTCGGTACAACAGGTGAGACGGTTCATAAACTGGTCTTGCGGATTATAGGGTGTCTGATCGGGGCATTGATGGGGGTA CTGTCGATTATTTTCATTATTCCCCACATGAGTGATATCGGGCAATTAATGGCGCTGGTATTTGGCTGCATTCTAGTGGC CGCTTGGGTGTCATGTGGCAGCGAACGTATCGCGTATGCTGGCGTACAGGTTGGGTTGGCCTTCCTGCTTACCGTGCTGC AAGGTTTTGGGCCAAGTACCGATATGGGTGTCGCACTCGATAGGGTGCTGGGTATCTTGCTGGGTAATCTGGTGGTGTAC TTGATTTTTAGCCGGCTGTGGCCAGTCGCGATTACCGATGCGGTGCATGTACATATTAGTCGCGCCTTGAAGGGGCTGAC AAATTTAGCCGCGCTCTCGCCGGATGCCCGGCCTGCAGCGCTCAGAGAGGCCACAACTGTCGAGGCGGAGATTACCAAGG CGCAGGAAGAGTTGGCGCTAATTCCCTTTGAGCCAGTACAATTTCGCCCCTCACGGAAAGAGTGCGCACGCCTACAGGCC ATCTTGGCAGAAATGGGCAAATTGTGCCCTGTTCTGTTTCTACCCACGGAAAAGTCAGCGTCTGATGTGGAACAACTGCG CCAGCTCTCGGCTGGGAGCGATGCCATGACATTATCGGATGAGCAAGGACAGAATAGCGGGTCTTTACGGCAAGAGTTAT CACCTATTAATCTTATAATTCAACAACGTATAAAGCGGCTTGAGGAACTTCTGGGAATTTAA
Upstream 100 bases:
>100_bases TGGGTGCGTGTTGTTCAGCGTTTCCCGGTGAGGATCAGCCTGGAAAAACCGCCGGAGGACCTGATGCGTATCGGGGCGAC TGCTGTGGTTATCGTGCGAA
Downstream 100 bases:
>100_bases TGACATGATGACGCACGCAGTATTGACTGCCCGGATAGCCAAAATAAGCCTGACTTGCTCGATATTGAGTTGGAGCCTGT TGATCGTAGGTTGTGCTACA
Product: PET family efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MTTVADGTLGGIIRQAKADLAFFPGRVAMAWRVAVLCALMAMIAMIYGIPESAISCYLIIFVMKPDGVESMVMAVAITIL VSLVVGLVFLLIHFTLEAAPLRMAALIVSSFLFLYLGSASKLGPVGSIIALVIAYVMTLLSNIPMGDVATRGLLYAWLMA VSPMLLIIGFNLFFGRAPQTLLRASLAERLSTVAETLRHPNAANMARVGEQLQEGQHEHQQRALFVRIFHLRPSAEAAWL ESAVKSSYRLLLVTSALPPTSPEAVRLELAAYCSDAAQAIASGDLAAPPHFAIEDTSDEINEIRNALIALANADNGQDLD APKSSFFAADALTNPVHQQFALKTTAAALICYLIYTALDWQDIHTAMITCYVAALGTTGETVHKLVLRIIGCLIGALMGV LSIIFIIPHMSDIGQLMALVFGCILVAAWVSCGSERIAYAGVQVGLAFLLTVLQGFGPSTDMGVALDRVLGILLGNLVVY LIFSRLWPVAITDAVHVHISRALKGLTNLAALSPDARPAALREATTVEAEITKAQEELALIPFEPVQFRPSRKECARLQA ILAEMGKLCPVLFLPTEKSASDVEQLRQLSAGSDAMTLSDEQGQNSGSLRQELSPINLIIQQRIKRLEELLGI
Sequences:
>Translated_633_residues MTTVADGTLGGIIRQAKADLAFFPGRVAMAWRVAVLCALMAMIAMIYGIPESAISCYLIIFVMKPDGVESMVMAVAITIL VSLVVGLVFLLIHFTLEAAPLRMAALIVSSFLFLYLGSASKLGPVGSIIALVIAYVMTLLSNIPMGDVATRGLLYAWLMA VSPMLLIIGFNLFFGRAPQTLLRASLAERLSTVAETLRHPNAANMARVGEQLQEGQHEHQQRALFVRIFHLRPSAEAAWL ESAVKSSYRLLLVTSALPPTSPEAVRLELAAYCSDAAQAIASGDLAAPPHFAIEDTSDEINEIRNALIALANADNGQDLD APKSSFFAADALTNPVHQQFALKTTAAALICYLIYTALDWQDIHTAMITCYVAALGTTGETVHKLVLRIIGCLIGALMGV LSIIFIIPHMSDIGQLMALVFGCILVAAWVSCGSERIAYAGVQVGLAFLLTVLQGFGPSTDMGVALDRVLGILLGNLVVY LIFSRLWPVAITDAVHVHISRALKGLTNLAALSPDARPAALREATTVEAEITKAQEELALIPFEPVQFRPSRKECARLQA ILAEMGKLCPVLFLPTEKSASDVEQLRQLSAGSDAMTLSDEQGQNSGSLRQELSPINLIIQQRIKRLEELLGI >Mature_632_residues TTVADGTLGGIIRQAKADLAFFPGRVAMAWRVAVLCALMAMIAMIYGIPESAISCYLIIFVMKPDGVESMVMAVAITILV SLVVGLVFLLIHFTLEAAPLRMAALIVSSFLFLYLGSASKLGPVGSIIALVIAYVMTLLSNIPMGDVATRGLLYAWLMAV SPMLLIIGFNLFFGRAPQTLLRASLAERLSTVAETLRHPNAANMARVGEQLQEGQHEHQQRALFVRIFHLRPSAEAAWLE SAVKSSYRLLLVTSALPPTSPEAVRLELAAYCSDAAQAIASGDLAAPPHFAIEDTSDEINEIRNALIALANADNGQDLDA PKSSFFAADALTNPVHQQFALKTTAAALICYLIYTALDWQDIHTAMITCYVAALGTTGETVHKLVLRIIGCLIGALMGVL SIIFIIPHMSDIGQLMALVFGCILVAAWVSCGSERIAYAGVQVGLAFLLTVLQGFGPSTDMGVALDRVLGILLGNLVVYL IFSRLWPVAITDAVHVHISRALKGLTNLAALSPDARPAALREATTVEAEITKAQEELALIPFEPVQFRPSRKECARLQAI LAEMGKLCPVLFLPTEKSASDVEQLRQLSAGSDAMTLSDEQGQNSGSLRQELSPINLIIQQRIKRLEELLGI
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MdtO family [H]
Homologues:
Organism=Escherichia coli, GI87082367, Length=499, Percent_Identity=28.8577154308617, Blast_Score=168, Evalue=9e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 68051; Mature: 67920
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVADGTLGGIIRQAKADLAFFPGRVAMAWRVAVLCALMAMIAMIYGIPESAISCYLII CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHEE FVMKPDGVESMVMAVAITILVSLVVGLVFLLIHFTLEAAPLRMAALIVSSFLFLYLGSAS EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLGPVGSIIALVIAYVMTLLSNIPMGDVATRGLLYAWLMAVSPMLLIIGFNLFFGRAPQT CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LLRASLAERLSTVAETLRHPNAANMARVGEQLQEGQHEHQQRALFVRIFHLRPSAEAAWL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH ESAVKSSYRLLLVTSALPPTSPEAVRLELAAYCSDAAQAIASGDLAAPPHFAIEDTSDEI HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHH NEIRNALIALANADNGQDLDAPKSSFFAADALTNPVHQQFALKTTAAALICYLIYTALDW HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCH QDIHTAMITCYVAALGTTGETVHKLVLRIIGCLIGALMGVLSIIFIIPHMSDIGQLMALV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGCILVAAWVSCGSERIAYAGVQVGLAFLLTVLQGFGPSTDMGVALDRVLGILLGNLVVY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LIFSRLWPVAITDAVHVHISRALKGLTNLAALSPDARPAALREATTVEAEITKAQEELAL HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE IPFEPVQFRPSRKECARLQAILAEMGKLCPVLFLPTEKSASDVEQLRQLSAGSDAMTLSD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCEEECC EQGQNSGSLRQELSPINLIIQQRIKRLEELLGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTVADGTLGGIIRQAKADLAFFPGRVAMAWRVAVLCALMAMIAMIYGIPESAISCYLII CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHEE FVMKPDGVESMVMAVAITILVSLVVGLVFLLIHFTLEAAPLRMAALIVSSFLFLYLGSAS EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLGPVGSIIALVIAYVMTLLSNIPMGDVATRGLLYAWLMAVSPMLLIIGFNLFFGRAPQT CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LLRASLAERLSTVAETLRHPNAANMARVGEQLQEGQHEHQQRALFVRIFHLRPSAEAAWL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH ESAVKSSYRLLLVTSALPPTSPEAVRLELAAYCSDAAQAIASGDLAAPPHFAIEDTSDEI HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHH NEIRNALIALANADNGQDLDAPKSSFFAADALTNPVHQQFALKTTAAALICYLIYTALDW HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCH QDIHTAMITCYVAALGTTGETVHKLVLRIIGCLIGALMGVLSIIFIIPHMSDIGQLMALV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGCILVAAWVSCGSERIAYAGVQVGLAFLLTVLQGFGPSTDMGVALDRVLGILLGNLVVY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LIFSRLWPVAITDAVHVHISRALKGLTNLAALSPDARPAALREATTVEAEITKAQEELAL HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEE IPFEPVQFRPSRKECARLQAILAEMGKLCPVLFLPTEKSASDVEQLRQLSAGSDAMTLSD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCEEECC EQGQNSGSLRQELSPINLIIQQRIKRLEELLGI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]