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The map label for this gene is 51597717

Identifier: 51597717

GI number: 51597717

Start: 4062370

End: 4062972

Strand: Reverse

Name: 51597717

Synonym: YPTB3419

Alternate gene names: NA

Gene position: 4062972-4062370 (Counterclockwise)

Preceding gene: 51597718

Following gene: 51597713

Centisome position: 85.63

GC content: 52.74

Gene sequence:

>603_bases
ATGACGCTTACAGAAGAACAGAAGGCGCTTTTCGATGCCCTGACGCAATTACAGCGCAGATTCGTTACCGCGCTGCTAGA
GGGTGCCAATCAAACCGAGGCATACCGAAGGGCTGGCGGTAAAGCTAGAGGCGATGGCGAGCGTTCCAAAGCCAGCCAGT
TAGTAACAAATAGTAACGTTCAAGCCTTCCTCCAGTCCGTACAGCACGAAACCGTTAACGAGGCCATCATGACCTACACC
GAAGCATTAGAGCGACTCACGTTGATGGGGCGCACGACAATTCATGACATCGCCACATTTGGCAATTATCAGATTGGCGA
GGACGAGGAAGGGCAACCGGTCTTTCAGGCGTCATGGAAGTTTAAGGACTCCAAGGATATTAAGCCCGAACACCTGGCCG
CTGTCGCTGAATTATCCACTGGCAAAGACGGACTAAAAATTAAGCTGCATGATCCGAAAGCCGCCATCAAGCAACTGGCT
GAAATGTGCGGATGGGAAGCACCGAAGAAAGCCGAATTGACCGGCCCGAACGGTGGCCCGATCCAAACGTCAAACCTAAC
CCCGGATGAAGCCGCCGAAGCCTACCGTAAAATGATGGGGTGA

Upstream 100 bases:

>100_bases
ATTGGCACAGATCGTGTATGGGAGTCATGTGATAGTCTGGCTGAACTCATTGAGACACAAATTAAAATGTTGGAAAACGG
TTAACTTATAAGGGGTCGAA

Downstream 100 bases:

>100_bases
TTTGGGTAAATTTACAGAGGCGGCGGCACTGGCAGCCAAGGAACGTCACCGCCAGAGGATGAGTGCGCCAGCTTACCAGT
GGAAGAAGCCAACGCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase Small Subunit

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNVQAFLQSVQHETVNEAIMTYT
EALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLA
EMCGWEAPKKAELTGPNGGPIQTSNLTPDEAAEAYRKMMG

Sequences:

>Translated_200_residues
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNVQAFLQSVQHETVNEAIMTYT
EALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLA
EMCGWEAPKKAELTGPNGGPIQTSNLTPDEAAEAYRKMMG
>Mature_199_residues
TLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNVQAFLQSVQHETVNEAIMTYTE
ALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAE
MCGWEAPKKAELTGPNGGPIQTSNLTPDEAAEAYRKMMG

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21997; Mature: 21866

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
QAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC
FKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAEMCGWEAPKKAELTGPNGGP
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IQTSNLTPDEAAEAYRKMMG
CCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCH
QAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCC
FKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAEMCGWEAPKKAELTGPNGGP
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IQTSNLTPDEAAEAYRKMMG
CCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA