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The map label for this gene is fliH

Identifier: 51597646

GI number: 51597646

Start: 3977136

End: 3977852

Strand: Reverse

Name: fliH

Synonym: YPTB3346

Alternate gene names: 51597646

Gene position: 3977852-3977136 (Counterclockwise)

Preceding gene: 51597647

Following gene: 51597645

Centisome position: 83.84

GC content: 54.25

Gene sequence:

>717_bases
ATGTCGATAAAAAATACCCCACGGGCGGGGGCAGTGAAACTGCGGGTTCATCAGTTTCCACCGCTACGTAAAGTGCGTCA
GGTGGCCCCGTCAGCGGCAGACCAGACACTGGATCCGGCAGAATACCAAAAGCAACTGATGGCAGGCTTTCAGGAGGGGA
TCAGCCAGGGATTTGATAAAGGGCTGGCCGAAGGGAAAGAGGAAGGCTATCAGGAAGGGGTGCGTCTTGGGCATGATGAC
GGGCTGAAAAAGGGGCGCATTGAGGGGCGGCAATCTGAGTTAGCCAGTTTTAATGATGTGATTAAACCCTTCAGCGGCTA
TATCACCCAACTACATGCCTATTTAGAGACCTATGAGCAGCGCCGCCGGGATGAGCTATTACAACTGGTGGAGAAAGTGA
CGCGGCAGGTGATCCGCTGTGAGCTGGCGTTGCAACCCGCACAGCTTCTAACCTTAGTGGAAGAGGCGTTGGCGGCGCTG
CCCATGGTGCCACAGCAACTCAAGGTCTATCTGAATCCGGCAGAATTTGGTCGTATTAATGATGTTGCGCCAGAAAAAGT
GCAAGCGTGGGGGCTGGCGGCAGATCCAGACATGGTGGGCGGTGAGTGCCGTATCGTCACAGAAACCACGGAAATTGATG
TGGGGTGCCAGCACCGTTTGGATCAATGCATTGGTGCGTTGCACAGCAGTTTTTTGACGGAACCTCACCATGAGTGA

Upstream 100 bases:

>100_bases
GAACACATTCGCAAAGTGATTATGGCGCAGGTGCGGGAACTGGCGGAAGCTGGAGAGATTCAGGTGCAGTTGTTTGCCGA
ACAGACCATGGAGTAAGGTG

Downstream 100 bases:

>100_bases
ATCTCCGGCTCTCGATCATGCCCTGAAATCTATCGAAAACATTCATCTGGCCCGAGTGGCGGGCCGGTTAGTGCGAGTGA
CGGGGCTGTTGCTGGAAAGT

Product: flagellar assembly protein H

Products: NA

Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Polar Flagellar Assembly Protein FliH; Lateral Flagellar Assembly Protein FliH

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSIKNTPRAGAVKLRVHQFPPLRKVRQVAPSAADQTLDPAEYQKQLMAGFQEGISQGFDKGLAEGKEEGYQEGVRLGHDD
GLKKGRIEGRQSELASFNDVIKPFSGYITQLHAYLETYEQRRRDELLQLVEKVTRQVIRCELALQPAQLLTLVEEALAAL
PMVPQQLKVYLNPAEFGRINDVAPEKVQAWGLAADPDMVGGECRIVTETTEIDVGCQHRLDQCIGALHSSFLTEPHHE

Sequences:

>Translated_238_residues
MSIKNTPRAGAVKLRVHQFPPLRKVRQVAPSAADQTLDPAEYQKQLMAGFQEGISQGFDKGLAEGKEEGYQEGVRLGHDD
GLKKGRIEGRQSELASFNDVIKPFSGYITQLHAYLETYEQRRRDELLQLVEKVTRQVIRCELALQPAQLLTLVEEALAAL
PMVPQQLKVYLNPAEFGRINDVAPEKVQAWGLAADPDMVGGECRIVTETTEIDVGCQHRLDQCIGALHSSFLTEPHHE
>Mature_237_residues
SIKNTPRAGAVKLRVHQFPPLRKVRQVAPSAADQTLDPAEYQKQLMAGFQEGISQGFDKGLAEGKEEGYQEGVRLGHDDG
LKKGRIEGRQSELASFNDVIKPFSGYITQLHAYLETYEQRRRDELLQLVEKVTRQVIRCELALQPAQLLTLVEEALAALP
MVPQQLKVYLNPAEFGRINDVAPEKVQAWGLAADPDMVGGECRIVTETTEIDVGCQHRLDQCIGALHSSFLTEPHHE

Specific function: Needed For Flagellar Regrowth And Assembly. [C]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26539; Mature: 26407

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKNTPRAGAVKLRVHQFPPLRKVRQVAPSAADQTLDPAEYQKQLMAGFQEGISQGFDK
CCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLAEGKEEGYQEGVRLGHDDGLKKGRIEGRQSELASFNDVIKPFSGYITQLHAYLETYEQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRDELLQLVEKVTRQVIRCELALQPAQLLTLVEEALAALPMVPQQLKVYLNPAEFGRIN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEECHHHCCCCC
DVAPEKVQAWGLAADPDMVGGECRIVTETTEIDVGCQHRLDQCIGALHSSFLTEPHHE
CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SIKNTPRAGAVKLRVHQFPPLRKVRQVAPSAADQTLDPAEYQKQLMAGFQEGISQGFDK
CCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLAEGKEEGYQEGVRLGHDDGLKKGRIEGRQSELASFNDVIKPFSGYITQLHAYLETYEQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRDELLQLVEKVTRQVIRCELALQPAQLLTLVEEALAALPMVPQQLKVYLNPAEFGRIN
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEECHHHCCCCC
DVAPEKVQAWGLAADPDMVGGECRIVTETTEIDVGCQHRLDQCIGALHSSFLTEPHHE
CCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA