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The map label for this gene is flgH

Identifier: 51597634

GI number: 51597634

Start: 3968090

End: 3968755

Strand: Reverse

Name: flgH

Synonym: YPTB3334

Alternate gene names: 51597634

Gene position: 3968755-3968090 (Counterclockwise)

Preceding gene: 51597635

Following gene: 51597633

Centisome position: 83.65

GC content: 52.7

Gene sequence:

>666_bases
ATGAAAAGGTTTTTAATACTGACGCCAATGGTGCTGGCGTTGTGTGGCTGTGAAAGCCCCGCGCTGTTGGTACAAAAAGA
TGATGCCGAATTTGCGCCACCGGCCAATCTGGTTCAACCCGCGACGGTAACGGAAGGAGGGGGGCTGTTTCAGCCCGCTT
ACAACTGGTCGCTGTTGCAGGATCGGCGTGCATACCGGATCGGCGATATTTTGACCGTGATACTGGATGAATCCACTCAA
TCCAGCAAGCAGGCCAAAACCAACTTTGGCAAAAAGAATGACATGAGCTTGGGGGTACCGGAAGTCTTGGGCAAAAAACT
GAATAAATTCGGCGGCTCCATCTCCGGTAAGCGCGATTTTGACGGCAGTGCCACCTCAGCACAGCAAAATATGCTGCGTG
GATCGATAACCGTTGCGGTCCATCAGGTATTGCCTAACGGCGTCTTGGTGATCCGTGGCGAAAAATGGCTGACCCTCAAC
CAGGGCGATGAATATATGCGGGTTACTGGTTTAGTGCGGGCAGATGATGTGGCACGGGATAACTCGGTTTCTTCTCAGCG
CATCGCCAACGCCCGTATCTCCTATGCCGGTCGTGGTGCGCTCAGTGATGCTAACTCAGCCGGTTGGTTAACGCGCTTCT
TTAACCATCCGCTATTCCCAATTTAG

Upstream 100 bases:

>100_bases
GAGATGAACGCCAAAATGGTCTCTGCCGCCGATGACATGCTGAAATTTGTTAGCCAGAAGCTGTGATCGCCAGCACCCTC
TTTTGAAAAGTGAATGACGA

Downstream 100 bases:

>100_bases
GCAGGAGCTTGACATGTTTTTAAACCGGATACATTTTTCGGCCTCGATACGGTTTTTTTCGGTCTCGATAAGGTTCTTGT
CGGGCTTGATAAAAACGAGG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 1 [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRFLILTPMVLALCGCESPALLVQKDDAEFAPPANLVQPATVTEGGGLFQPAYNWSLLQDRRAYRIGDILTVILDESTQ
SSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLN
QGDEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI

Sequences:

>Translated_221_residues
MKRFLILTPMVLALCGCESPALLVQKDDAEFAPPANLVQPATVTEGGGLFQPAYNWSLLQDRRAYRIGDILTVILDESTQ
SSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLN
QGDEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI
>Mature_221_residues
MKRFLILTPMVLALCGCESPALLVQKDDAEFAPPANLVQPATVTEGGGLFQPAYNWSLLQDRRAYRIGDILTVILDESTQ
SSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGGSISGKRDFDGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLN
QGDEYMRVTGLVRADDVARDNSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=226, Percent_Identity=34.5132743362832, Blast_Score=113, Evalue=8e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24026; Mature: 24026

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLILTPMVLALCGCESPALLVQKDDAEFAPPANLVQPATVTEGGGLFQPAYNWSLLQ
CCCEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCEECCCCCCHHHH
DRRAYRIGDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGGSISGKRDF
HCHHHHHHHEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
DGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMRVTGLVRADDVARD
CCCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEECCCCCEEEEEEEEECCCCCCC
NSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI
CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKRFLILTPMVLALCGCESPALLVQKDDAEFAPPANLVQPATVTEGGGLFQPAYNWSLLQ
CCCEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCEECCCCCCHHHH
DRRAYRIGDILTVILDESTQSSKQAKTNFGKKNDMSLGVPEVLGKKLNKFGGSISGKRDF
HCHHHHHHHEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
DGSATSAQQNMLRGSITVAVHQVLPNGVLVIRGEKWLTLNQGDEYMRVTGLVRADDVARD
CCCCHHHHHHHHHHHHHHHEEECCCCCEEEEECCEEEEECCCCCEEEEEEEEECCCCCCC
NSVSSQRIANARISYAGRGALSDANSAGWLTRFFNHPLFPI
CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]