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The map label for this gene is fliD

Identifier: 51597625

GI number: 51597625

Start: 3958195

End: 3959481

Strand: Reverse

Name: fliD

Synonym: YPTB3325

Alternate gene names: 51597625

Gene position: 3959481-3958195 (Counterclockwise)

Preceding gene: 51597626

Following gene: 51597624

Centisome position: 83.45

GC content: 43.98

Gene sequence:

>1287_bases
ATGTCTTTGTCTATATCTGGGGTTGACCCAGAAAAGTTGGCCGAAATCAGTGCTAATAAAACCTTCGCCAGTAAGAAAGC
CCGTTTGGCGGCACAGCAAAAACAAATTAATGACCAGAAGGCGAGTGTCAATAAATTACAAACGGCAGTAACCGATTTCC
GTTCGGCATTAAATAAATTAAACCAACGGGATTCTGGGCTACTGCAAATAAAAACCACCAGTAGCGACGATAAGCTGGTG
AGTGCCAGTGCGACCGCACAAGCGGTAAAAGGCAAATACCATTTATTCGTCGAGCAATTAGCCAAGACAGACCAGATTGC
TCTGAAGGGTATTACTGATGACAAATTAAAGGCAGCAACAGGCCCAGTAGAGCTGTCCGTGGGTAAAACCAAATTAACCG
TTGATTTAACCTCGGTAAATAGCCTGGAAGAGTTAGCGAATGCCATTAACAATGCCAGTGACAAGGCTAAAAATAGCGAT
GGGCAAGGAATTACCGCCTCATTAGTGCGTACCGGCAGTGATGTGGTGTTAACGCTGAGCAGCAATAAAAGCGGTGCGGC
CCATACGTTGGATGTGAGTGATTTAACCACCAAACTTAGTGCAATAGAGCAGCAACTGGCCGCCGGGCAAGATGCCATTG
TCTGGCTAGGGGAACAGAATAAAGGAATTAAAATAACGCACGACAGCAATGTATTGGATAAGGCAATTCAGGGGCTTACC
CTATCATTGCAGAAAGAAAAGGTTGCGGTTGAGGTGGGCGTAGAAATCGATAATGAGGCCAGTGAAGATCAACTGAAAAC
GTTCGTCTCCAAGTTTAATCAATTGCAAAAACTGGTGGAGTCCTCATCCTCGGTACCCAATGCCAGTGCCATCAGTACCC
TGTTGAATAACATTATCAGAAGCCCAATTGATGGTGAACGTATTCATGCTTTCGGTGTGATTAGTGGGCGGGACGGTGAA
TTAACCATCGACAGCAAACAATTGCAAGAAACGCTGAAAGCCAATACGCAGCATTTCAGTGAATTCTTCAATGGCAAGAA
TGGGGTCGTCAATAAATTAACCGAGTCATTAGAACCTTATATCAATGCCACATCGGGTTTATTCAAGCTGGATAATGACC
GATTGAGTCTGGATATTAGCGCTATCCAGAAAGAGATTGATGCGGTTGATAACGACTATAAACGGGCATATGACGCTCAT
TTGGTAAAATTCTCGGGGATAGCCGCTATGATCTCCAAAATGAACGTTACCATGAAATTATTTGAACCAGAAAAAGAGCA
GAAATAA

Upstream 100 bases:

>100_bases
CCCTGCGTTAAATAAATTCAATGGATATCAATGAATTAAGTGTTGGCATGAATTTTGCTTAACGTGAAGTGCAAAAATAA
AATATAAAATAGGAGTTATT

Downstream 100 bases:

>100_bases
AGAGAATTTATGATGTATGACGAACCGATGGCAGGATTATATCAACAAACGGATATTGATATTCAGGCGGCAGCAGCAAC
GCCACATCAATTGGTTATAA

Product: flagellar hook-associated protein

Products: NA

Alternate protein names: HAP2; Filament CAP protein [H]

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSLSISGVDPEKLAEISANKTFASKKARLAAQQKQINDQKASVNKLQTAVTDFRSALNKLNQRDSGLLQIKTTSSDDKLV
SASATAQAVKGKYHLFVEQLAKTDQIALKGITDDKLKAATGPVELSVGKTKLTVDLTSVNSLEELANAINNASDKAKNSD
GQGITASLVRTGSDVVLTLSSNKSGAAHTLDVSDLTTKLSAIEQQLAAGQDAIVWLGEQNKGIKITHDSNVLDKAIQGLT
LSLQKEKVAVEVGVEIDNEASEDQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIHAFGVISGRDGE
LTIDSKQLQETLKANTQHFSEFFNGKNGVVNKLTESLEPYINATSGLFKLDNDRLSLDISAIQKEIDAVDNDYKRAYDAH
LVKFSGIAAMISKMNVTMKLFEPEKEQK

Sequences:

>Translated_428_residues
MSLSISGVDPEKLAEISANKTFASKKARLAAQQKQINDQKASVNKLQTAVTDFRSALNKLNQRDSGLLQIKTTSSDDKLV
SASATAQAVKGKYHLFVEQLAKTDQIALKGITDDKLKAATGPVELSVGKTKLTVDLTSVNSLEELANAINNASDKAKNSD
GQGITASLVRTGSDVVLTLSSNKSGAAHTLDVSDLTTKLSAIEQQLAAGQDAIVWLGEQNKGIKITHDSNVLDKAIQGLT
LSLQKEKVAVEVGVEIDNEASEDQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIHAFGVISGRDGE
LTIDSKQLQETLKANTQHFSEFFNGKNGVVNKLTESLEPYINATSGLFKLDNDRLSLDISAIQKEIDAVDNDYKRAYDAH
LVKFSGIAAMISKMNVTMKLFEPEKEQK
>Mature_427_residues
SLSISGVDPEKLAEISANKTFASKKARLAAQQKQINDQKASVNKLQTAVTDFRSALNKLNQRDSGLLQIKTTSSDDKLVS
ASATAQAVKGKYHLFVEQLAKTDQIALKGITDDKLKAATGPVELSVGKTKLTVDLTSVNSLEELANAINNASDKAKNSDG
QGITASLVRTGSDVVLTLSSNKSGAAHTLDVSDLTTKLSAIEQQLAAGQDAIVWLGEQNKGIKITHDSNVLDKAIQGLTL
SLQKEKVAVEVGVEIDNEASEDQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIRSPIDGERIHAFGVISGRDGEL
TIDSKQLQETLKANTQHFSEFFNGKNGVVNKLTESLEPYINATSGLFKLDNDRLSLDISAIQKEIDAVDNDYKRAYDAHL
VKFSGIAAMISKMNVTMKLFEPEKEQK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46160; Mature: 46028

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSISGVDPEKLAEISANKTFASKKARLAAQQKQINDQKASVNKLQTAVTDFRSALNKL
CCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NQRDSGLLQIKTTSSDDKLVSASATAQAVKGKYHLFVEQLAKTDQIALKGITDDKLKAAT
CCCCCCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHHCC
GPVELSVGKTKLTVDLTSVNSLEELANAINNASDKAKNSDGQGITASLVRTGSDVVLTLS
CCEEEEECCEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEHHHHHCCCCEEEEEE
SNKSGAAHTLDVSDLTTKLSAIEQQLAAGQDAIVWLGEQNKGIKITHDSNVLDKAIQGLT
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCE
LSLQKEKVAVEVGVEIDNEASEDQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIR
EEEECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SPIDGERIHAFGVISGRDGELTIDSKQLQETLKANTQHFSEFFNGKNGVVNKLTESLEPY
CCCCCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
INATSGLFKLDNDRLSLDISAIQKEIDAVDNDYKRAYDAHLVKFSGIAAMISKMNVTMKL
HCCCCCEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
FEPEKEQK
ECCCCCCC
>Mature Secondary Structure 
SLSISGVDPEKLAEISANKTFASKKARLAAQQKQINDQKASVNKLQTAVTDFRSALNKL
CEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NQRDSGLLQIKTTSSDDKLVSASATAQAVKGKYHLFVEQLAKTDQIALKGITDDKLKAAT
CCCCCCEEEEEECCCCCCEEEHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHHCC
GPVELSVGKTKLTVDLTSVNSLEELANAINNASDKAKNSDGQGITASLVRTGSDVVLTLS
CCEEEEECCEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCEEHHHHHCCCCEEEEEE
SNKSGAAHTLDVSDLTTKLSAIEQQLAAGQDAIVWLGEQNKGIKITHDSNVLDKAIQGLT
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHCCCE
LSLQKEKVAVEVGVEIDNEASEDQLKTFVSKFNQLQKLVESSSSVPNASAISTLLNNIIR
EEEECCEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SPIDGERIHAFGVISGRDGELTIDSKQLQETLKANTQHFSEFFNGKNGVVNKLTESLEPY
CCCCCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
INATSGLFKLDNDRLSLDISAIQKEIDAVDNDYKRAYDAHLVKFSGIAAMISKMNVTMKL
HCCCCCEEEECCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
FEPEKEQK
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]