| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597621
Identifier: 51597621
GI number: 51597621
Start: 3955879
End: 3956349
Strand: Reverse
Name: 51597621
Synonym: YPTB3321
Alternate gene names: NA
Gene position: 3956349-3955879 (Counterclockwise)
Preceding gene: 51597622
Following gene: 51597620
Centisome position: 83.39
GC content: 39.92
Gene sequence:
>471_bases ATGAAGACCAAGAAAAAAGCATTTTCGATGAAAATGCGGGTATTCCTATTGCTAATTTCCGGGGTAATCGCTGTTTTTTT ATTTTCCCGCGAGACGATTTTAAAAAAAATGGGGTATCAACCTGCCACGGTGAGCCCATCTTTTGTTCGTGGTAATAAAG CGGTTCAGTTTGTTGAAATTAAGAACATGGTGATTACGCTGAAAGACAATAACGCCGAGCGCTATTTGCAACTGGAATTA GGCATGGCAACCGGTGATGACAAAGACATTAAAAATGTCATTGCGATGGTGCCGGTTATTCAAGCCACAACAGTGAATTT ACTTTCCAATATGGATTATCAAGCGGTGCGCCATACCTCTATTTTAGATTTACGCCGCCAGCTAATGAATGAATATAAGC AAGATTTCGCAGGATTAAATGTGCCGATGCCATTTGATGATGTGGTTATTAGCAGAATGGTCTTTCAATAA
Upstream 100 bases:
>100_bases ATTCTGGCTGCACAACATTTTGAGAGTCAGGCAGAAAAAAATGCCGATGATGGGACGCTCCTAATAACGATATAAAGATA TCTACTACAAAGGATTATTG
Downstream 100 bases:
>100_bases TCATAATGGAAAATAGAGAATTTGAAGCGTGCTTAACGCTCACCGCCGCAGAGGAAGGGAAATATCTGAATGCGTATTTA CCGCTGGTAAAACGTATTGT
Product: flagellar biogenesis protein
Products: NA
Alternate protein names: Flagellar Biogenesis Protein Associated With Basal Body
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSPSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAGLNVPMPFDDVVISRMVFQ
Sequences:
>Translated_156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSPSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAGLNVPMPFDDVVISRMVFQ >Mature_156_residues MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSPSFVRGNKAVQFVEIKNMVITLKDNNAERYLQLEL GMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTSILDLRRQLMNEYKQDFAGLNVPMPFDDVVISRMVFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17783; Mature: 17783
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSPSFVRGNKAVQFVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEE KNMVITLKDNNAERYLQLELGMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTS CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILDLRRQLMNEYKQDFAGLNVPMPFDDVVISRMVFQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKTKKKAFSMKMRVFLLLISGVIAVFLFSRETILKKMGYQPATVSPSFVRGNKAVQFVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEE KNMVITLKDNNAERYLQLELGMATGDDKDIKNVIAMVPVIQATTVNLLSNMDYQAVRHTS CCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILDLRRQLMNEYKQDFAGLNVPMPFDDVVISRMVFQ HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA