| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is gutA [H]
Identifier: 51597570
GI number: 51597570
Start: 3851947
End: 3853371
Strand: Reverse
Name: gutA [H]
Synonym: YPTB3268
Alternate gene names: 51597570
Gene position: 3853371-3851947 (Counterclockwise)
Preceding gene: 51597571
Following gene: 51597564
Centisome position: 81.21
GC content: 44.35
Gene sequence:
>1425_bases ATGAGCCTGGACAGCCAGCACCTCTGTAGCTTGAAGGACGAAGGGGATAAAAGGCTAAAAATAAATATGAACAATTCAGG CATGAAAATCCCAATGAAAGAGCTGGCGTCTTATTTTGGGTATGGGATGGGGCAGTGTTTCAGTTTTGGGTTGGTTGGGA CTTTTATTCTCTTTTTCTATACTGACATTATGGGGATCTCGCCGGTAGCAGCCAGTATGATCTTTTTAATTGCCAGGGTA TGGGATGCTATACATGACCCATTAATTGCCGGTGTAATGGATACTATTAATATGCGGCGCGGGAAATTCCGCCCATATTT GCTGTTTACTCCCTTCTTGATTTTCCTTGTTACGGTCGCTGCGTTTTATAATATCGAAGCCAGCTTGATGACTAAAACGA TCTACGCAGGTGTGACTTATATCCTGTGGGGGACGCTCTACGCTCTCTCTGATATCCCGTTTTGGTCAATGAGCACCGTG ATGACGGATGAACCGCAAGAGCGAGCTAAAACAGCGACCTGCGCGATGTTGGGTGTGAATGCGGGTATCGGCGCTACGAT GATTTTATTCCCTTATATCAGCGGGTTATTTGCTGAGAACAGTGCTGATCGTGGTTATTTTGCGGGTGTTGTTATCCTCA TGGTTTTGGGGGTGATACTCATGTTGAATGGGTTCTTTAATACAAAAGAACGCGTCAACGTCACGGTGACGGAAAAGGTC ACGCTAAAGCAGACATTTATTGTGGTCTGGCAAAATAAGCCGCTATTTTTTATTCTTAGCGCCTTTTTCATGAATGTGTT TTCTAACATCGTGAATACTTTTTATATTTTCTTTTTCACTTATAACATGGGGGATGCTGAGCTGGTTTCTGTTATCGGCT TAATTACATTCACCTGTGCTTTAGCTTGTCTGGGAACGCCATTCTTAACCCGCCATTTTAAGAAGCGAGATTTGTTCATT ACATTATGTGTGTTGGAGATCATCGCTCGCGTTGGTTTCTGGTTCACCGGTTATAATAATGTCGTGTCAGTCATGGTATG GCTAACCGTGATCACTGCCATCTTCATGATGACGAATCCACTTATTTCCGCGATGATTGCCGATACTGTGGAATATTCCT ACTATCACACCGGTAAGCGCTGCGCGGCCATCACGTTCTCCGGACAGACTTTTGTCGGTAAATTGTCGGTCGCTGTTGCT GGCGGTGTCTCTGGCCTGATCCTGTCAATATTGGGATATATGCCTAATGTGGCCCAATCGACATGGACATTGAATGGCCT ATTTTTCTGTATTTCTCTGTTGCCCGCCGTGGGTGCCGTGGTGCGTATCCTCATTATGCGTAAATATAAATTTACCGAAG ATGAACATGCAATTCTTCGTGAAGAACTGAAACAAGGGAGATTCCACTCTTCAGTAGGCAAATAA
Upstream 100 bases:
>100_bases TTTATCTGTACCTTACATAATATATACCCAAGTGACTTCGAGATGCAGGTAGGCGGCAACCGAGTAAATTCCCAGGAGCT TAAAGAACTAAGTGACTGGG
Downstream 100 bases:
>100_bases AGTGATTCTCAGTAGGGCGTGAATGGATTAAAGCCGCCAGAATAAACCGCTATGGTGTGAGAGGGTCTTAATTAACGCGT TTGTAGTAATAAACGATAGG
Product: Sodium:galactoside symporter (GPH) family protein.
Products: Li (I) [Cytoplasm]; melibiose [Cytoplasm]; Na (I) [Cytoplasm]; melibiose [Cytoplasm]; Proton [Cytoplasm]; melibiose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSLDSQHLCSLKDEGDKRLKINMNNSGMKIPMKELASYFGYGMGQCFSFGLVGTFILFFYTDIMGISPVAASMIFLIARV WDAIHDPLIAGVMDTINMRRGKFRPYLLFTPFLIFLVTVAAFYNIEASLMTKTIYAGVTYILWGTLYALSDIPFWSMSTV MTDEPQERAKTATCAMLGVNAGIGATMILFPYISGLFAENSADRGYFAGVVILMVLGVILMLNGFFNTKERVNVTVTEKV TLKQTFIVVWQNKPLFFILSAFFMNVFSNIVNTFYIFFFTYNMGDAELVSVIGLITFTCALACLGTPFLTRHFKKRDLFI TLCVLEIIARVGFWFTGYNNVVSVMVWLTVITAIFMMTNPLISAMIADTVEYSYYHTGKRCAAITFSGQTFVGKLSVAVA GGVSGLILSILGYMPNVAQSTWTLNGLFFCISLLPAVGAVVRILIMRKYKFTEDEHAILREELKQGRFHSSVGK
Sequences:
>Translated_474_residues MSLDSQHLCSLKDEGDKRLKINMNNSGMKIPMKELASYFGYGMGQCFSFGLVGTFILFFYTDIMGISPVAASMIFLIARV WDAIHDPLIAGVMDTINMRRGKFRPYLLFTPFLIFLVTVAAFYNIEASLMTKTIYAGVTYILWGTLYALSDIPFWSMSTV MTDEPQERAKTATCAMLGVNAGIGATMILFPYISGLFAENSADRGYFAGVVILMVLGVILMLNGFFNTKERVNVTVTEKV TLKQTFIVVWQNKPLFFILSAFFMNVFSNIVNTFYIFFFTYNMGDAELVSVIGLITFTCALACLGTPFLTRHFKKRDLFI TLCVLEIIARVGFWFTGYNNVVSVMVWLTVITAIFMMTNPLISAMIADTVEYSYYHTGKRCAAITFSGQTFVGKLSVAVA GGVSGLILSILGYMPNVAQSTWTLNGLFFCISLLPAVGAVVRILIMRKYKFTEDEHAILREELKQGRFHSSVGK >Mature_473_residues SLDSQHLCSLKDEGDKRLKINMNNSGMKIPMKELASYFGYGMGQCFSFGLVGTFILFFYTDIMGISPVAASMIFLIARVW DAIHDPLIAGVMDTINMRRGKFRPYLLFTPFLIFLVTVAAFYNIEASLMTKTIYAGVTYILWGTLYALSDIPFWSMSTVM TDEPQERAKTATCAMLGVNAGIGATMILFPYISGLFAENSADRGYFAGVVILMVLGVILMLNGFFNTKERVNVTVTEKVT LKQTFIVVWQNKPLFFILSAFFMNVFSNIVNTFYIFFFTYNMGDAELVSVIGLITFTCALACLGTPFLTRHFKKRDLFIT LCVLEIIARVGFWFTGYNNVVSVMVWLTVITAIFMMTNPLISAMIADTVEYSYYHTGKRCAAITFSGQTFVGKLSVAVAG GVSGLILSILGYMPNVAQSTWTLNGLFFCISLLPAVGAVVRILIMRKYKFTEDEHAILREELKQGRFHSSVGK
Specific function: Probably involved in glucitol uptake [H]
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]
Homologues:
Organism=Escherichia coli, GI1790561, Length=444, Percent_Identity=31.3063063063063, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI48994989, Length=458, Percent_Identity=28.6026200873362, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI87082306, Length=451, Percent_Identity=28.159645232816, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI145693206, Length=453, Percent_Identity=28.9183222958057, Blast_Score=155, Evalue=7e-39, Organism=Escherichia coli, GI1787902, Length=444, Percent_Identity=29.2792792792793, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786466, Length=434, Percent_Identity=27.6497695852535, Blast_Score=145, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001927 - InterPro: IPR018043 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 52914; Mature: 52783
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDSQHLCSLKDEGDKRLKINMNNSGMKIPMKELASYFGYGMGQCFSFGLVGTFILFFY CCCCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TDIMGISPVAASMIFLIARVWDAIHDPLIAGVMDTINMRRGKFRPYLLFTPFLIFLVTVA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AFYNIEASLMTKTIYAGVTYILWGTLYALSDIPFWSMSTVMTDEPQERAKTATCAMLGVN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHEECC AGIGATMILFPYISGLFAENSADRGYFAGVVILMVLGVILMLNGFFNTKERVNVTVTEKV CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEE TLKQTFIVVWQNKPLFFILSAFFMNVFSNIVNTFYIFFFTYNMGDAELVSVIGLITFTCA EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHEEECCCHHHHHHHHHHHHHHHH LACLGTPFLTRHFKKRDLFITLCVLEIIARVGFWFTGYNNVVSVMVWLTVITAIFMMTNP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH LISAMIADTVEYSYYHTGKRCAAITFSGQTFVGKLSVAVAGGVSGLILSILGYMPNVAQS HHHHHHHHHHHHHHEECCCEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHCCCHHHH TWTLNGLFFCISLLPAVGAVVRILIMRKYKFTEDEHAILREELKQGRFHSSVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure SLDSQHLCSLKDEGDKRLKINMNNSGMKIPMKELASYFGYGMGQCFSFGLVGTFILFFY CCCCHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TDIMGISPVAASMIFLIARVWDAIHDPLIAGVMDTINMRRGKFRPYLLFTPFLIFLVTVA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AFYNIEASLMTKTIYAGVTYILWGTLYALSDIPFWSMSTVMTDEPQERAKTATCAMLGVN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHEECC AGIGATMILFPYISGLFAENSADRGYFAGVVILMVLGVILMLNGFFNTKERVNVTVTEKV CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEE TLKQTFIVVWQNKPLFFILSAFFMNVFSNIVNTFYIFFFTYNMGDAELVSVIGLITFTCA EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHEEECCCHHHHHHHHHHHHHHHH LACLGTPFLTRHFKKRDLFITLCVLEIIARVGFWFTGYNNVVSVMVWLTVITAIFMMTNP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHH LISAMIADTVEYSYYHTGKRCAAITFSGQTFVGKLSVAVAGGVSGLILSILGYMPNVAQS HHHHHHHHHHHHHHEECCCEEEEEEECCCEEEHHHHHHHHCCHHHHHHHHHHHCCCHHHH TWTLNGLFFCISLLPAVGAVVRILIMRKYKFTEDEHAILREELKQGRFHSSVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Li (I) [Periplasm]; melibiose [Periplasm]; Na (I) [Periplasm]; melibiose [Periplasm]; Proton [Periplasm]; melibiose [Periplasm] [C]
Specific reaction: Li (I) [Periplasm] + melibiose [Periplasm] = Li (I) [Cytoplasm] + melibiose [Cytoplasm] Na (I) [Periplasm] + melibiose [Periplasm] = Na (I) [Cytoplasm] + melibiose [Cytoplasm] Proton [Periplasm] + melibiose [Periplasm] = Proton [Cytoplasm] + melibiose [Cy
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]