| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597544
Identifier: 51597544
GI number: 51597544
Start: 3812691
End: 3813458
Strand: Reverse
Name: 51597544
Synonym: YPTB3237
Alternate gene names: NA
Gene position: 3813458-3812691 (Counterclockwise)
Preceding gene: 51597545
Following gene: 51597543
Centisome position: 80.37
GC content: 33.46
Gene sequence:
>768_bases ATGATAAATATTAAAAAATTGACATTGAAATATTTTTATATTTTATTTTTTACACCCCACTTAGCACATGCTACGTATTA TAATGAAGTGTCATTTGATGATTACATCGTTTTATTAGACAAAAATGAAAATGCAATTTTGCATGTAAAAAAAAACCACA CTGACATTCAATGTGTAATTAAAAATTGGAATATAAAGTACAACAATGGCGCGGGTGTCATATCACTAACAACGGATAAG AAGGCCATCCTTTTGGCCAATACACAGGCATATCTTTACGTAGATGAAGTAATTAATTGCAAGGAAGGGGGAGTTTCATT ACACAAAGTCCCCGTTCCAAACTCACCCCCATTTGGCACCGTAATAGATTTAAACTTTGATAAAAAAATCTATCTTTCTG TAGTATTAGAAGATATAAGGACCTTGAGTTATACTGCCATCGTGTCTAAATTCGATAGCAATAAAAATATAATTAATGCC AAAGGGTTTGAAAATAAACAGACAACTAATAAAGATAATTCATTTTATTTAGAAGGATCAAGCGGCGGATACGGTGGTAA AATATCCATAAATGGGAAGTATATCTTCCCTGTCAATCTGGACTGTTCCTCTGACTCATTCCCTGGGGTCTGGGATCTCG AAAACAAAAAAAGAGTTGTATTCTCATCACATAAAAATAGCAGCATCACTATAGATGAAAAATGTCATAAACTTTTCAAC GGTGTGGCCAGTCTAGAAGAACTTGGAGGGGAGTTAGTCTCAAAATAA
Upstream 100 bases:
>100_bases GATGACAGTGTAGTGACAAAGGTCACTCAAGCGATTAATGGTGGTGACATTGGGCTGTCACAAAGAAAAGTAATGACTAA TAACGCAAAGGGAAAATTAA
Downstream 100 bases:
>100_bases GGGCCTCCTTAAGTTGTATAACTTCAAAAAAACTGGTCATGCATTCAATGCGGAGATCATCAGGTAAAATCCTCGTATTT ATCTGAGAGGGTTTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN GVASLEELGGELVSK
Sequences:
>Translated_255_residues MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN GVASLEELGGELVSK >Mature_255_residues MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN GVASLEELGGELVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28622; Mature: 28622
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVI CCEEEEHHHEEEEEEEECCHHHHEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEE KNWNIKYNNGAGVISLTTDKKAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGT EECEEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCE VIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINAKGFENKQTTNKDNSFYLEGS EEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC SGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN CCCCCCEEEECCEEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCEEEHHHHHHHHHH GVASLEELGGELVSK HHHHHHHHHHHHHCC >Mature Secondary Structure MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVI CCEEEEHHHEEEEEEEECCHHHHEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEE KNWNIKYNNGAGVISLTTDKKAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGT EECEEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCE VIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINAKGFENKQTTNKDNSFYLEGS EEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC SGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN CCCCCCEEEECCEEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCEEEHHHHHHHHHH GVASLEELGGELVSK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA