| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597488
Identifier: 51597488
GI number: 51597488
Start: 3734001
End: 3735104
Strand: Reverse
Name: 51597488
Synonym: YPTB3177
Alternate gene names: NA
Gene position: 3735104-3734001 (Counterclockwise)
Preceding gene: 51597489
Following gene: 51597487
Centisome position: 78.72
GC content: 43.39
Gene sequence:
>1104_bases ATGTCATCATTTAAAACCCTGGGATTTTTCTTCCTTTCACTGTCATTACTCTTCTCTTCTTTATTAGTGCTCTTATCTCT GCTGCTATTCGCTGGTTTATTACTGTTCCCCAGTCTCTTACCGTTCTCCCGTTTCTTGCCATTCGCTGGATTCTCTCCAG CCAGCGGATTTTCGCTAGCGACAAAATATGATGAGGGATTTTCGGGTAATGTGGGCTATAGGGGGGATCTCAATGACAGC CCGAAAACGGACCCACTGTGGATTCCATTACCTGCGTTACCACTTATTCAACAGGCTGTTACTGAATTAGTGCCAACGGT GCAGGGGCAGTACCAAGAGCGTGTCATGAGCCAAGTGTGTGCATTAGCCCGAGGTGAGCGTACTCAGGAACAGGTTGCTC AAACACTGCGGTCATACGATATCGATATCAGCAATATTCCCCCTCAGGGACATCCTCTTTCTCTGTTGGTCAGTACCGAC CAATCCAGTCGTGTCATCGGCTGTGCTGCTTATATTGCCAGTTCTGTCATGGCTATCCCTAAGTCGGATGAGTTTATGGT GAGTACTGATAAACCCGCGGATGCCTTACCAGGGAAAAAAAATGAAGCGGCAAGCAAAGAGAAAACATTGAGTATTGATC CTAAAAAATTAGCTCAATACCTTCAGACTCAATTGGCTGTAGCGAAGGCTAATGCTGATATTTTTGCAATTATTGCCGTT GAGTTAGAAAAAAAACCAGGGCTCACTGTGAATGAATATTCGGTACAAATAAAAAAAGTATTTAGTGAAGTTGCTTCGGC CTATTTACAACGGGTCAAAGCTCTTTATGCCGTGGGGGCTGGGGTTAATTATAAATTAATTACTTACTCTGATGAGGGTT TTAAGTTCATTAGCAATGATGGTTACTTGTTTGAGTATGGGTACGACAGCTTAAGTTTGTATTTCAACAGAATTCCTTGG TATGGCAGCGGAAAAATATTGGGGAAAGAGTATTTTTTCTCTGTTTCGTATATTGAACCGAATCTTGCAAAACGCATAAG AGAGGAGAAGCGTGAAGAGAAGAGTGAAGGGGTTCTCAATCAAGAGAGCGGTGTTGCTCCCTGA
Upstream 100 bases:
>100_bases GCGCGTTACGCCAACGCTGAATGCTATTCAGGCTGTCACTAACGGGTTGTAGGGTGTTTTGTACAACCCGATTCTCGCTC TTGGGCATCAAAGGATCGCC
Downstream 100 bases:
>100_bases ATGCTGATTTGCTGGCAGCCATCAAAACGGGCTAGTTACTTTTATTGTTAGGGAGTAGAAACCTCTGGCAGACTTTTTTA GCGTACAGGTGTACACTGAA
Product: exported protein.
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDS PKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTD QSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPW YGSGKILGKEYFFSVSYIEPNLAKRIREEKREEKSEGVLNQESGVAP
Sequences:
>Translated_367_residues MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDS PKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTD QSSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPW YGSGKILGKEYFFSVSYIEPNLAKRIREEKREEKSEGVLNQESGVAP >Mature_366_residues SSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLATKYDEGFSGNVGYRGDLNDSP KTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVCALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQ SSRVIGCAAYIASSVMAIPKSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAVE LEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISNDGYLFEYGYDSLSLYFNRIPWY GSGKILGKEYFFSVSYIEPNLAKRIREEKREEKSEGVLNQESGVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40442; Mature: 40311
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEE TKYDEGFSGNVGYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVC EECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC KSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV CCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEE ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISND EECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC GYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLAKRIREEKREEKSEGVLN CEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCC QESGVAP CCCCCCC >Mature Secondary Structure SSFKTLGFFFLSLSLLFSSLLVLLSLLLFAGLLLFPSLLPFSRFLPFAGFSPASGFSLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEE TKYDEGFSGNVGYRGDLNDSPKTDPLWIPLPALPLIQQAVTELVPTVQGQYQERVMSQVC EECCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALARGERTQEQVAQTLRSYDIDISNIPPQGHPLSLLVSTDQSSRVIGCAAYIASSVMAIP HHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC KSDEFMVSTDKPADALPGKKNEAASKEKTLSIDPKKLAQYLQTQLAVAKANADIFAIIAV CCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEE ELEKKPGLTVNEYSVQIKKVFSEVASAYLQRVKALYAVGAGVNYKLITYSDEGFKFISND EECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCC GYLFEYGYDSLSLYFNRIPWYGSGKILGKEYFFSVSYIEPNLAKRIREEKREEKSEGVLN CEEEEECCCHHHHHHHCCCCCCCCCEECHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCC QESGVAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA