| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597472
Identifier: 51597472
GI number: 51597472
Start: 3715590
End: 3717311
Strand: Direct
Name: 51597472
Synonym: YPTB3161
Alternate gene names: NA
Gene position: 3715590-3717311 (Clockwise)
Preceding gene: 51597471
Following gene: 51597475
Centisome position: 78.31
GC content: 55.57
Gene sequence:
>1722_bases ATGAAATCCGTTGTCACGCTGAGAGTCGGTGATGATGTGATTGCTGCAAATAAATTAAATCTTTCACTTTCGTTAAACGG CTGTGGGATGGGGTTTGTTACAGCAATAACGGATCGGGACTGTACTGGCGAGCTGGTGCGTCTGGATTTGGGTTATAACA CATCAATATATCGCTGGCTGACGGGATTTGTTGAACGTAGCGCGCCAGCTGAAAATGGCGCACAACGATTAATGGTGCGC GAGCTGGTCGGCGTGTTCGAGCGTTCGTGTCCGTGCTCACTGCAACACCCTACATTACGCGACGTCACCGAGGCTATCGG CGCGGCAACGAATATGCGGTTTGTCTTGCCCGCCGGCACGGCTTATACAGACACCCCGATCCCCCATTTTCAACACAATG GCAGTGGTTATCTGCTTTTAAAGGATTTGGGCCGCGCGTTCAGTATTCCGGATTATTGCTGGTACCAACTGCCAGATGGC ACGGTTTATGTCGGCAGTTATGCAGACTCCCGATTTGCATTGACGCCAGTCGATATCCCGCCGGAATTCGCCCAGGGCGG CAGCAGCGGTAATAGCCTGGAATTGCCGCTTATCCCTGCCATTCGTCCCGGCGTGATTGTTAATGGCCGGCGAATCACTA GAGTTGATGTAAGTCATGACACGATGACCTTGATCTGGACGCCGCTCGACAGCCAGGGCCAGCCGGCACAGAAAACAGCA GAGCAGCGCCAGATTGATAAAATTTACCCAGAGCTGGGCGCAGGCTTACATTTGCCCCGCCGCGCGCGGGTGATGAGTCC GACCGATACCGCCGAGTTGGGTGACCCGTCCGATCCCTTCCGGCCACGTTATGCCGTCAATGTTCAATTGCTGGATGAGA ACGGCAACGCCGCCGCCGGCGCGCAGGAATATAACGCGGTACCGCTCCCCATTCCGATGGCTGGCGGTGAGGGGGGTATG TTCCAGTTCCCACCTGAGGGGACACTGGTCGAAATTGGTTTTGCTGATGGCCGGCCAGATAAGCCGATGATTAGGCAAAC GCTGTCTGAAGGGCTATCACTGCCCGCCGTCAAGCCAGGCGAGCAGTTGCAGCAACAGCGCGCCGGCGTCAGTCAGCGCG TGACGGTAGACGGCAGTTGGCAGCGTGATACCGATCAGGCGATCGAGGAAACCAGTAGCCGGCGCAGCGTGACCAGCGAC GAGGAAAACCGCACTACCACAACCCGCAGTACCACGATAAAAGCCAATGACAGCACTACAGTTTTGGGGACTAAAACACT CATGGCCGGCCAGGTGGTGCAACTTGCCGAGGGTGACTACTCAATCGGGACATCGGCCAATATGTTGACCAAGGTCGGCA AAGACAGAACTGACGATGTTGGCCAGAGCCAAAATATCACAGTTGGCCATAACCAAAATGTCATGGTTGGCCAGGACCAG ACTACTGATATCGGCGGGGCGCTCACTGAGAAAATAGCGGGCATCCGTCGCAGTGTTGCCGCCGCGCAAGAACTGATCGC CCCGTCAGTTCGGTTGGGTACTGATGAAGTTAACGTGTTGACGCTGCTCACTGATACGCTTGATGTCATACAAACGCTGG CACAGCAGACCGCCAGCCATACCCATACCAACACCGGCGGTCCGCTTAACGCGGGTGATTTTACTGCCACAGCAAATCGC GCATCATCTCTCGCTGTCAAGTACGGCCCGTTCATCGCTTAA
Upstream 100 bases:
>100_bases CCGCCGGCGCGGCAGACGGTGAAACAGCAGAAACCCGCACGTGGTTTGAAAGTGTGCTGCAAAAGGTCGATAACGCTATC GGCCCCGCCGGGGGTGAAGC
Downstream 100 bases:
>100_bases CCACTCGACTGCAGCACAGACGTAAATGTCTGTGCTCGACACCCACAATAAAACCTTCTGTAGCACACGTAGCGTAGGCG CTCATCTAAGCAGTGGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSSGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRRARVMSPTDTAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPIPMAGGEGGM FQFPPEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSTTIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGQSQNITVGHNQNVMVGQDQ TTDIGGALTEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTASHTHTNTGGPLNAGDFTATANR ASSLAVKYGPFIA
Sequences:
>Translated_573_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSSGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRRARVMSPTDTAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPIPMAGGEGGM FQFPPEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSTTIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGQSQNITVGHNQNVMVGQDQ TTDIGGALTEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTASHTHTNTGGPLNAGDFTATANR ASSLAVKYGPFIA >Mature_573_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSSGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRRARVMSPTDTAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPIPMAGGEGGM FQFPPEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSTTIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGQSQNITVGHNQNVMVGQDQ TTDIGGALTEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTASHTHTNTGGPLNAGDFTATANR ASSLAVKYGPFIA
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61483; Mature: 61483
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWL CCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHH TGFVERSAPAENGAQRLMVRELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGT HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC AYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDGTVYVGSYADSRFALTPVDIP CCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCC PEFAQGGSSGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA HHHHCCCCCCCEEEEEECCCCCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHH EQRQIDKIYPELGAGLHLPRRARVMSPTDTAELGDPSDPFRPRYAVNVQLLDENGNAAAG HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC AQEYNAVPLPIPMAGGEGGMFQFPPEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPG CHHCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCH EQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSDEENRTTTTRSTTIKANDSTT HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEE VLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGQSQNITVGHNQNVMVGQDQ EEEEHHHHHCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCC TTDIGGALTEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTASH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHC THTNTGGPLNAGDFTATANRASSLAVKYGPFIA CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCC >Mature Secondary Structure MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWL CCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHH TGFVERSAPAENGAQRLMVRELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGT HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC AYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDGTVYVGSYADSRFALTPVDIP CCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCC PEFAQGGSSGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA HHHHCCCCCCCEEEEEECCCCCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHH EQRQIDKIYPELGAGLHLPRRARVMSPTDTAELGDPSDPFRPRYAVNVQLLDENGNAAAG HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC AQEYNAVPLPIPMAGGEGGMFQFPPEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPG CHHCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCH EQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSDEENRTTTTRSTTIKANDSTT HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCEE VLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGQSQNITVGHNQNVMVGQDQ EEEEHHHHHCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCC TTDIGGALTEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTASH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHC THTNTGGPLNAGDFTATANRASSLAVKYGPFIA CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA