| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597471
Identifier: 51597471
GI number: 51597471
Start: 3715039
End: 3715593
Strand: Direct
Name: 51597471
Synonym: YPTB3160
Alternate gene names: NA
Gene position: 3715039-3715593 (Clockwise)
Preceding gene: 51597470
Following gene: 51597472
Centisome position: 78.3
GC content: 52.07
Gene sequence:
>555_bases ATGACTGATATTGTGATGTTGGCGCTTGACGGCGAAGCTATTCCGCTAAAAAACATCATTGTGACGCTCTCTATGTCAAT ACAAGACAAGGACCAAAGCGGACAGGCCAGCAGCACGGCCAGCGCGGAGCAAGGCACAAAAGGTAAAGAGTTAAAGGTGT CCGGGGTAGTCGCTTATAGCGATAAATCGATATTGACCCGTATTTTCAGTCTTGCTGAAGCGAAAAACAGTGACGGCAGT AAAAAACGCTATCGCGTGGCACATGAAATGGCGCAAGCAGTAAAGTTTCGGGAAGCCACATTTAGCAGCGGCGTGGATGC AGCGCAACAGACAGACAGCATGGCCTGGCTGGTTAATTTTACGCTGACTGAACATGCAAGCGTTGCTGAGCGTAAAGCAC AACAAGCGAGCGCGGGCGGTAAAACTACGACAATCCAGACAGCAGATGGCACCGCCGGCGCGGCAGACGGTGAAACAGCA GAAACCCGCACGTGGTTTGAAAGTGTGCTGCAAAAGGTCGATAACGCTATCGGCCCCGCCGGGGGTGAAGCATGA
Upstream 100 bases:
>100_bases ACTATGAAAAAAGACATTCCGGACGGCCAGGCCATTTTTAGCCTGGCGTTACTGTTTGTGGGCGCAGATTTGGCCCCACT GCGTGCTATGGTGGTAAATC
Downstream 100 bases:
>100_bases AATCCGTTGTCACGCTGAGAGTCGGTGATGATGTGATTGCTGCAAATAAATTAAATCTTTCACTTTCGTTAAACGGCTGT GGGATGGGGTTTGTTACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTDIVMLALDGEAIPLKNIIVTLSMSIQDKDQSGQASSTASAEQGTKGKELKVSGVVAYSDKSILTRIFSLAEAKNSDGS KKRYRVAHEMAQAVKFREATFSSGVDAAQQTDSMAWLVNFTLTEHASVAERKAQQASAGGKTTTIQTADGTAGAADGETA ETRTWFESVLQKVDNAIGPAGGEA
Sequences:
>Translated_184_residues MTDIVMLALDGEAIPLKNIIVTLSMSIQDKDQSGQASSTASAEQGTKGKELKVSGVVAYSDKSILTRIFSLAEAKNSDGS KKRYRVAHEMAQAVKFREATFSSGVDAAQQTDSMAWLVNFTLTEHASVAERKAQQASAGGKTTTIQTADGTAGAADGETA ETRTWFESVLQKVDNAIGPAGGEA >Mature_183_residues TDIVMLALDGEAIPLKNIIVTLSMSIQDKDQSGQASSTASAEQGTKGKELKVSGVVAYSDKSILTRIFSLAEAKNSDGSK KRYRVAHEMAQAVKFREATFSSGVDAAQQTDSMAWLVNFTLTEHASVAERKAQQASAGGKTTTIQTADGTAGAADGETAE TRTWFESVLQKVDNAIGPAGGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19334; Mature: 19202
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIVMLALDGEAIPLKNIIVTLSMSIQDKDQSGQASSTASAEQGTKGKELKVSGVVAYS CCCEEEEEECCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEC DKSILTRIFSLAEAKNSDGSKKRYRVAHEMAQAVKFREATFSSGVDAAQQTDSMAWLVNF CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEE TLTEHASVAERKAQQASAGGKTTTIQTADGTAGAADGETAETRTWFESVLQKVDNAIGPA EHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GGEA CCCC >Mature Secondary Structure TDIVMLALDGEAIPLKNIIVTLSMSIQDKDQSGQASSTASAEQGTKGKELKVSGVVAYS CCEEEEEECCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEC DKSILTRIFSLAEAKNSDGSKKRYRVAHEMAQAVKFREATFSSGVDAAQQTDSMAWLVNF CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEE TLTEHASVAERKAQQASAGGKTTTIQTADGTAGAADGETAETRTWFESVLQKVDNAIGPA EHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GGEA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA