| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is tfaR [C]
Identifier: 51597469
GI number: 51597469
Start: 3713821
End: 3714339
Strand: Direct
Name: tfaR [C]
Synonym: YPTB3158
Alternate gene names: 51597469
Gene position: 3713821-3714339 (Clockwise)
Preceding gene: 51597468
Following gene: 51597470
Centisome position: 78.27
GC content: 46.05
Gene sequence:
>519_bases ATGGCGACACTGCAACATTATAAAAATTTTGAAATATCAGCGCAGCAATATGATCCGGAATTGCAGGCTGAAGTGATTTA TCACGTTGATGAAGATGGTAGGGATTGGTACGCACTGCAAAAAACATTTAGCGAAGACACAATAAAAGTGGGCTATAACG CGCAAGGGTTTGTTTGCACAGTGTCAGAGCATGTTTACGCGATTGCGCCAACAGGCTTATCTATTGTTGAAGTCAATTCA TTGCCAGCGGGTTTTTCGTTGGTGTTTGGCGCTTACGAGTACCTTAACGGCGCTGTAGTGATGCGCATTCCGTCAGTTGA TGATCTCACAGCAGCGGCGGAAGAGCGTCGGCGCGAGTTGATGAGTAATGTGTCTGTTGAGATAGCAACACTTGATGATA TTGCGCAAAGCGGCACGGGTACAGAGCAAGAACTTAAGCGACTGACTGCATTAAAACAGTATCGTATTGCATTGATGCGA CTTGATATTAATGAGCAGTGGCCGGTGTTGCCGGCGTGA
Upstream 100 bases:
>100_bases TTATAACACGTGCTGTTGTCAATCCAGCGAGTTCATATGCGCGCGGTCTATTTATGCAGCGATCAACGGGTCAGTGGGTT CAGATGGGAGGAGATATTTA
Downstream 100 bases:
>100_bases CGTGGCATAAATCGACGTTACGCATTCCGAAAAATCTGGCCCCGGTCAGCTGCTCGACCGTGGCCGTTCATCCTTGGACG TTTGGCGTAGGCCAGACAGA
Product: bacteriophage protein.
Products: NA
Alternate protein names: Phage Tail Fiber Assembly Protein; Tail Assembly Chaperone Gp; Phage Tail Assembly Chaperone; Bacteriophage Tail Protein; Tail Fiber Assembly Protein GpG
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MATLQHYKNFEISAQQYDPELQAEVIYHVDEDGRDWYALQKTFSEDTIKVGYNAQGFVCTVSEHVYAIAPTGLSIVEVNS LPAGFSLVFGAYEYLNGAVVMRIPSVDDLTAAAEERRRELMSNVSVEIATLDDIAQSGTGTEQELKRLTALKQYRIALMR LDINEQWPVLPA
Sequences:
>Translated_172_residues MATLQHYKNFEISAQQYDPELQAEVIYHVDEDGRDWYALQKTFSEDTIKVGYNAQGFVCTVSEHVYAIAPTGLSIVEVNS LPAGFSLVFGAYEYLNGAVVMRIPSVDDLTAAAEERRRELMSNVSVEIATLDDIAQSGTGTEQELKRLTALKQYRIALMR LDINEQWPVLPA >Mature_171_residues ATLQHYKNFEISAQQYDPELQAEVIYHVDEDGRDWYALQKTFSEDTIKVGYNAQGFVCTVSEHVYAIAPTGLSIVEVNSL PAGFSLVFGAYEYLNGAVVMRIPSVDDLTAAAEERRRELMSNVSVEIATLDDIAQSGTGTEQELKRLTALKQYRIALMRL DINEQWPVLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19265; Mature: 19134
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLQHYKNFEISAQQYDPELQAEVIYHVDEDGRDWYALQKTFSEDTIKVGYNAQGFVCT CCCCCCCCCCEEEHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCCEEEE VSEHVYAIAPTGLSIVEVNSLPAGFSLVFGAYEYLNGAVVMRIPSVDDLTAAAEERRREL ECCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH MSNVSVEIATLDDIAQSGTGTEQELKRLTALKQYRIALMRLDINEQWPVLPA HHCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC >Mature Secondary Structure ATLQHYKNFEISAQQYDPELQAEVIYHVDEDGRDWYALQKTFSEDTIKVGYNAQGFVCT CCCCCCCCCEEEHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCCEEEE VSEHVYAIAPTGLSIVEVNSLPAGFSLVFGAYEYLNGAVVMRIPSVDDLTAAAEERRREL ECCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH MSNVSVEIATLDDIAQSGTGTEQELKRLTALKQYRIALMRLDINEQWPVLPA HHCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA