| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597426
Identifier: 51597426
GI number: 51597426
Start: 3673919
End: 3676231
Strand: Reverse
Name: 51597426
Synonym: YPTB3113
Alternate gene names: NA
Gene position: 3676231-3673919 (Counterclockwise)
Preceding gene: 51597427
Following gene: 51597425
Centisome position: 77.48
GC content: 45.7
Gene sequence:
>2313_bases ATGTTTTTATTCGTGGCAGCAGTATCCGATATTCATCTTGGATTTCAGTGCTTTCTTGTTCTTTTTGCTGAAAATATAAG CGACAATGTCGGATTTCCTGAAGGGTGCCAAGCGAGAATGAAAATAAACAGTAAGTTATGGATGGGCCTCCTAATGGGCA TGCTAGGTATGGCGGCACCTCCATCACAGGCTTCTTCTGATAATACTGGCTGTGTGTGGGGAAAATATTGCCCGCTCAGT GGTGTACCCTTTTTGGATGTTTACAATGATACTCGGGTTAATATGATGTTATTGGTTGGAGAACCAAAAAATTTCATATT GCCACGTTTAACGATGCCAGCGGATATTACCCGTAGTAGGAATTACCATTTTGGTGAGTTTTATTATGATGAAATGAGTT TTCCGAAGCGGGAAAAAAGTCTTACAGATGAGAATAATGATAGCCCTTCGGAAGAAACGCCATTTGATAAGATGGCAAAG ACGCTAGGCATCAATTCGGCTTCGTTTAAGGGAACCAATGCCCGATATAGAGAAGTACGGCATATCTCCAATAATCCCGC ATCAGTTGAGCAATTTTTTACCGCTTTACTGGCAGACTCGTCCTTAACTGCCGACGATCGACATAATTTAGCCCTCTGGC GATCCAATATTTTTCATAATGTCGATGCACCGGTCGATGGTGGAATTACACCGCCACCTTTTAACATTGTGCCAGGCTCA CATGTTGATGCTTTTAGCGATTATCTTCATGGTGCCAATGCATTTTATCGGGGCGATTACCCAGAGGCCACCGCTTTATT TTCTGCCCTCCAAAAGAGTTCTCAAGCATGGGTCGCAGAAACAGCGACTTATATGTTGTTCCGAGTTGCGCTCAATGAGA GCAGTACAAATGCGTCGGATAAATATGGCATGTTTGAAACTAAAAATATCAATCAGGATGCCGCCCGTCAGGCATTGGAT TATTCTCGGGCCTATTTAGTTGCTTATCCCCAAGGCATTTACGCAGAGTCGATTCAGGGGTTGGAGCGCCGTATTTACTG GTACCTCTCTGATTGGCAACAACTGGCGCGGCTGTATGAAGAGACATTACTGGCAGCACCGAATGCTGAAGCTTTGTGGG ATACCGTATCAGAAGTTGATGCTAAATTTATCAGCAAAGATGCCTTTGGTGGCGAGCCCTTTATCAGCGATATGCAAGCA CCTTTACTGACCTTCACACAAACATTACGTTGGTTGCGATTAGGGGGGCGCCAGAGTGGCTCTGAGTTGGAGGTTACGCA GGAGAAACTGGCAAGTTATAAACCGATGTTTGTCGATGCGGATAGGCTCCCCCTTTGGCAGTATCTACAGACGGCCTGGC TCTATTATCATGAGCAAGATTATGCCGGTGTCGTCGCCACTGTCTCGGCTGTCGACTCTCTGCCAGCCACTGACATTGTG ACCTTCAGTCAACAGATTCTATATGGTGATGCATTGGTGGCTCAACAACAATGGTCACAGGCCGAAGCACATTGGCGCAA GCTGCTGGGCCTGGTGCAATCGCCGCAACAACAGCAATATCTGCAACTCAAACTCGCCGCGGTTCTGGTGAACAGTGATC AAATTGAGGCCATATTTACCGCAGATAGCCCAATCAAAAACCTGCGTTATCGTTCTCTGATACTCAAAACAAAAGCTCAA AAAGCACTTTTACAACAGCAAGTTATTTCTGGTGCTAATGATGAGGAAAAAACCATTGCTCTGCACACGCTATTACTGCG GGATCTTATGCTTGGTGATTATCAGGGTTATGAGCAGGATAAACAGTTAAGCCCTCATATTCAGCAATCCGTCGATCAAA AAAGCTTTGCCGATGTAGACCTGGCGGCGTTCGATTGGCAGGGCGATAATGTGGAGCAGGGCTATGCCTGTGCTGCGTTA GATGGGACGGTAAAAGCATTGGTTAAAAATAAAACGGATGGTCATGCCCTCAACTGCTTGGGAGAATTCTTCCGTGTAAC TGACATCAATATCAATACTTATCAGGAAGGGGAGGGCAATGAGGTGCTGAATGTCGCAGTCCATGCACATGAAACAGTGA TAACTCAGCCCAATCGTTTCGATTATTATCAACACGTTATCAACGACCCGAAGGCGGAGCCAGAAGATAAAAGCTATGCG CTTTACCGGGCTGTTATGTGCTATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATGTCGATATTGCAACACGTAA GCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGTAGCCGATGGGCAGAACGGCTCAACTATTACTGGTAA
Upstream 100 bases:
>100_bases CTAGAGGGTGCCAATCAAACCAGAGATTAATCGGTACACTAAATTTGGCCAGATGAATATACATATCTAACATCATCGCT TTCAGCTCTTGATTAACGGT
Downstream 100 bases:
>100_bases GCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCC CATGATTATCAGGCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAAPPSQASSDNTGCVWGKYCPLS GVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAK TLGINSASFKGTNARYREVRHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGS HVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALD YSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQA PLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIV TFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQ KALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAAL DGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYA LYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Sequences:
>Translated_770_residues MFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAAPPSQASSDNTGCVWGKYCPLS GVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAK TLGINSASFKGTNARYREVRHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGS HVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALD YSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQA PLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIV TFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQ KALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAAL DGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYA LYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW >Mature_770_residues MFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAAPPSQASSDNTGCVWGKYCPLS GVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAK TLGINSASFKGTNARYREVRHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGS HVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALD YSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQA PLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIV TFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQ KALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAAL DGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYA LYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86847; Mature: 86847
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAAP CEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECHHHHHHHHHHHHHCCCC PSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSR CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCC NYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREVR CCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH HISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGS HCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC HVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASD CHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC KYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYE CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSG HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIV CCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHH TFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEEEEEE ADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC KQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCL CCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHH GEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYA HHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCHHH LYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure MFLFVAAVSDIHLGFQCFLVLFAENISDNVGFPEGCQARMKINSKLWMGLLMGMLGMAAP CEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECHHHHHHHHHHHHHCCCC PSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSR CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCC NYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREVR CCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH HISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGS HCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC HVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFRVALNESSTNASD CHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC KYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYE CCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSG HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC SELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIV CCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHH TFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAVLVNSDQIEAIFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEEEEEE ADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC KQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCL CCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHH GEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYA HHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCHHH LYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNYYW HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA